Streptomyces globosus: C0216_12485
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Entry
C0216_12485 CDS
T06864
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sgz
Streptomyces globosus
Pathway
sgz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sgz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C0216_12485 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sgz01007
]
C0216_12485 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgz03016
]
C0216_12485 (lysS)
Enzymes [BR:
sgz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
C0216_12485 (lysS)
Amino acid related enzymes [BR:
sgz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
C0216_12485 (lysS)
Transfer RNA biogenesis [BR:
sgz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
C0216_12485 (lysS)
Prokaryotic type
Other AARSs
C0216_12485 (lysS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
Phage_T7_Gp5_9
Motif
Other DBs
NCBI-ProteinID:
AXE24164
UniProt:
A0A344TZU3
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All DBs
Position
2787992..2791297
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AA seq
1101 aa
AA seq
DB search
MSATTEQTRGTRNRFLNRVPDGFAAFFGALGLFCAVLALSPALRYLLRHVVRFLDDYVVP
VSENLAYAVFLFLLAAALGTRKKVAWWIVVAYLVLLVAVDVLLLADGWYWIGGPSLVIAV
AALALLTAARSEFYAASRPGAFWRALLVLGLGLLAAVLLGWALVALFPGTLPRGQWLDWA
AKQVFGGLFSAREFGGRPPRPLSFLLGLFGALALLGAAATLFRSQRMTAALHGDEEPRIR
ALLGAYGRSDSLGYFATRRDKAVVFAPNGRACVTYRVEAGVCLASGDPVGDPAAWTPAID
AWLAVARRHGWQPAVMGASEDGATAYARSGLSALQLGDEAILHVAHFDLDGRDMRVTRQA
VSRVRRAGATTSIRRHSALSDEEMQRIIDRADTWRDTETERGFSMALDRLGDPADGDCLL
VEAFDADGELIALLSFVPWGKDGISLDLMRRDRNAPNGVMEFMVAQLCAAAPGLGVRRIS
LNFAVFRSAFEEGGRIGAGPVLRLWRRLLLFFSRWWQLEALYRSNVKYGPEWYPRFLCYQ
DAGSLARVSLASGIAEGFVSVPSLRKLWGNGHPKGVTAPANTAGLPPLDTLGLDTADGQG
GPALPAERLPEQVRVRHAKLDRLRAAGVDPYPVGIAARTHTASELPTAHPGLPPGARSDG
PATLAGRIMVVRDLGGVVFAVLRDWSGDIQLMLTRDESGPAVLDSFTSQVDFGDHVTATG
RMGASKSGEPSLLVESWQLTGKCLRPLPDKRKGLADPEARVRRRYLDLVASPEARDVVRA
RSTAVQALRHGLLERGFLEVETPMLQQIHGGANARPFRTHINAYDLDLYLRIAPELYLKR
LCVGGMEKVFEMGRTFRNEGVSYKHNPEFTMLEAYQAFADYDVMLDLTRELIQGAATAAF
GSPIAHKTGPDGRLAVHDISGTWPVKTLYGAVSEALGEAVDADTPEAVLRRLCDRAGVPH
TPADTRGDIVLEMYERLVEEKTTLPTFYKDFPTDVSPLTRQHRRDPRLAERWDLVAFGTE
LGTAYSELTDPVEQRRRLTAQSLLAAGGDPEAMELDEDFLDALEYAMPPTGGLGIGVDRL
VMFLTGLTIRETLPFPLVRRG
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccacgacggagcagacccgggggacccggaaccgcttcctgaaccgggttccc
gacgggttcgccgcgttcttcggcgccctcggcctgttctgcgccgtcctggcgctctcg
ccggcgctgcgctacctgctgcggcacgtcgtccgcttcctcgacgactacgtggtcccc
gtcagcgagaacctcgcctacgcggtcttcctcttcctcctcgccgccgcgctcggcacc
cgcaagaaggtcgcctggtggatcgtcgtcgcctacctggtcctgctggtcgccgtcgac
gtcctgctcctcgcggacggctggtactggatcggcggcccctccctcgtcatcgccgtc
gccgccctggctctgctgaccgccgcccgcagcgagttctacgccgcctcccgccccgga
gcgttctggcgggccctgctcgtcctcgggctcggcctgctcgccgccgtcctcctcggc
tgggcgctcgtcgccctgttccccggcaccctgccccgcggccagtggctggactgggcc
gccaagcaggtcttcggcggcctgttctcggcccgcgagttcggcggccggccgcctcgg
cccctgtccttcctgctcggcctgttcggcgcgctcgccctgctgggcgccgcagccacc
ctcttccgctcccagcgcatgaccgccgccctccacggcgacgaagagccccgcatccgc
gcgctgctcggcgcgtacggccgctccgactccctcggctacttcgccacccggcgcgac
aaggccgtcgtcttcgcccccaacggcagggcctgcgtcacctaccgcgtcgaggcgggc
gtctgcctcgccagcggcgacccggtgggcgacccggccgcctggaccccggccatcgac
gcctggctcgccgtcgcccgccgccacggctggcagcccgccgtcatgggcgcctccgag
gacggcgccaccgcctacgcccggtccgggctcagcgccctccaactcggcgacgaggcc
atcctgcacgtcgcccacttcgacctcgacggccgcgacatgcgcgtcacccgccaggcc
gtgagccgcgtccgccgcgccggggccaccacctccatccgccgccactccgctctgtcc
gacgaggagatgcagcgcatcatcgaccgcgccgacacctggcgcgacaccgagacggag
cggggcttctccatggcactcgaccggctcggcgaccccgccgacggcgactgcctgctc
gtcgaggccttcgacgccgacggcgagctcatcgccctgctgtccttcgtcccctggggc
aaggacggcatctccctcgacctgatgcgccgcgaccgcaacgcccccaacggcgtcatg
gagttcatggtcgcccagctgtgcgccgccgcccccggcctgggcgtgcgccggatctcg
ctgaacttcgccgtcttccgctccgccttcgaggagggcggccggatcggcgccggcccc
gtcctgagactctggcgccggctgctgctgttcttctcccgctggtggcagctggaggcc
ctctaccgctcgaacgtcaagtacggccccgagtggtacccgcggttcctctgctaccag
gacgccggctcgctcgcccgggtcagcctggcctccggtatcgccgagggcttcgtctcc
gtgcccagcctgcgcaagctgtggggcaacggccaccccaagggcgtcaccgcccccgcg
aacaccgccgggctgcccccgctcgacaccctcggcctcgacacggccgacgggcagggc
ggcccggccctcccggccgagcggctgcccgagcaggtccgcgtccgccacgccaagctc
gaccggctgcgcgccgccggcgtcgacccctaccccgtcggcatcgccgcccgcacccac
acggcgtcggagctgccgaccgcccaccccggcctgccgcccggggcccgcagcgacggc
cccgccaccctcgccgggcggatcatggtcgtccgcgacctcggcggcgtcgtcttcgcc
gtcctgcgcgactggtccggcgacatccagctgatgctcacccgggacgagagcggcccc
gccgtcctcgactctttcacctcccaggtcgacttcggcgaccacgtcaccgccaccggc
cgcatgggggcgagcaagtccggcgagccctccctcctcgtggagtcctggcagctcacc
ggcaagtgcctgcgccccctgcccgacaagcgcaagggcctcgccgaccccgaggcccgc
gtccgccgccgctacctcgacctcgtcgccagccccgaggcccgcgacgtcgtgcgggcc
cgctcgaccgccgtacaggcccttcggcacggcctgctggagcgcggcttcctggaggtc
gagaccccgatgctccagcagatccacggcggcgccaacgcccgccccttccggacccac
atcaacgcctacgacctcgacctgtacctgcgcatcgcacccgagctgtacctcaagcgg
ctgtgcgtcggcggcatggagaaggtcttcgagatgggccgcaccttccgcaacgaaggc
gtctcctacaagcacaaccccgagttcacgatgctggaggcctaccaggccttcgccgac
tacgacgtgatgctcgacctgacccgcgagctcatccagggcgccgccaccgccgccttc
ggctcgccgatcgcccacaagaccggccccgacggcaggctggccgtccacgacatctcc
ggcacctggcccgtcaagaccctgtacggagcggtcagcgaggccctcggcgaagccgtc
gacgccgacaccccggaagccgtgctgcgccggctgtgcgaccgcgccggggtgccccac
acccccgccgacacccgcggagacatcgtcctggagatgtacgagcggctcgtcgaggag
aagaccaccctgcccaccttctacaaggacttccccaccgacgtctccccgctgacccgg
cagcaccggcgcgatccgcgcctggccgagcgctgggacctcgtcgccttcgggaccgaa
ctgggcacggcctactcggagctgaccgaccccgtcgagcagcggcgccggctcaccgcc
cagtcgctgctcgccgcgggcggcgacccggaggcgatggaactcgacgaggacttcctc
gacgccctggagtacgcgatgccgcccaccggcgggctcggcatcggagtggaccgcctc
gtcatgttcctcaccggtctgacgatccgcgagacgctgccgttcccgctcgtgcggcgc
ggctga
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