Staphylococcus haemolyticus JCSC1435: SH0828
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Entry
SH0828 CDS
T00250
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sha
Staphylococcus haemolyticus JCSC1435
Pathway
sha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SH0828 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sha03021
]
SH0828 (rpoA)
03400 DNA repair and recombination proteins [BR:
sha03400
]
SH0828 (rpoA)
Enzymes [BR:
sha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SH0828 (rpoA)
Transcription machinery [BR:
sha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SH0828 (rpoA)
DNA repair and recombination proteins [BR:
sha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SH0828 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF961
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
BAE04137
UniProt:
Q4L888
LinkDB
All DBs
Position
831996..832940
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AA seq
314 aa
AA seq
DB search
MIEIEKPRIETIEISEDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEG
VLHEFSAIDNVVEDVSTIIMNIKKLALKIYSEEDKTLEIDVRDEGEVTASDITHDSDVEV
LNPELKIATVSKGGHLKIRLVANKGRGYALAEQNNTSDLPIGVIPVDSLYSPVERVNYTV
ENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKILTEHLNIFVGLTDEAQNAEIMIEK
EEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVK
YKLEDLGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattgaaaaacctagaattgagacaattgaaattagtgaagatgctaaattc
ggtaagttcgttgttgaaccactagaacgtggctacggtactacactaggaaactcctta
cgtcgtatcctactatcttcattaccaggtgcagccgttaagtacattgaaatcgaaggt
gttttacacgaattctcagctatagataatgttgttgaagatgtttctacaattattatg
aacatcaaaaaattagcacttaaaatctattctgaagaagataaaacattagaaatcgat
gttcgagatgaaggcgaagttactgcaagtgacattactcacgatagtgatgtagaagtt
ctaaatccagaacttaaaatcgcaacagtgtctaaaggtggacatttaaaaattcgtcta
gttgctaacaagggtagaggttacgcattagcagaacaaaataatactagtgatttacca
atcggtgtaattcctgttgattcactatactcaccagttgaacgtgttaactatacagtt
gaaaacacacgtgtcggtcaaagtagtgattttgataaattaactttagatgtttggact
aatggttcaatcactccacaagagtcagtatcattagctgctaagattttgactgaacat
ttaaatatttttgtaggtcttacagatgaagctcaaaatgctgaaatcatgattgaaaaa
gaagaagatcaaaaagaaaaagtacttgaaatgtctattgaagaattagacttatcagta
cgttcatacaactgtttaaaacgtgcaggaatcaattcagttcaagagttagctgataaa
tctgaagctgatatgatgaaagttcgtaatttaggtcgtaaatctctagaagaagttaaa
tataaattagaagatttaggattaggattaagaaaagaagattaa
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