Staphylococcus haemolyticus JCSC1435: SH1046
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Entry
SH1046 CDS
T00250
Symbol
pcrA
Name
(GenBank) ATP-depentend DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sha
Staphylococcus haemolyticus JCSC1435
Pathway
sha03420
Nucleotide excision repair
sha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SH1046 (pcrA)
03430 Mismatch repair
SH1046 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sha03400
]
SH1046 (pcrA)
Enzymes [BR:
sha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SH1046 (pcrA)
DNA repair and recombination proteins [BR:
sha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SH1046 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SH1046 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAE04355
LinkDB
All DBs
Position
1048080..1050275
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AA seq
731 aa
AA seq
DB search
MNSLVNNMNKEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNILAITF
TNKAAKEMKERVEQLVGEEAQVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV
IKDVLKNENIDSKRFEPRMFIGAISNLKNELKTPEDAINEANDFHSQMVATVYSGYQRQL
TRNEALDFDDLIMKTIQLFERIPDALEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFK
NLCVVGDSDQSIYGWRGADIQNILSFEEDYPDAKTIFLEQNYRSTKTILTAANEVIKHNS
ERKPKGLWTANTGGEKIKYYEAMTERDEAEYVVREIMKHRKAGKDYSDMAILYRTNAQSR
VLEETFMKSNLPYTMVGGQKFYDRKEIKDLLSYLRVVANSNDEISLQRIINVPKRGIGPS
SVEKIQRYANDNNISMFDALAEVDFIGLSKKVTQECIKFYELIQNLIKEQEFLEVSEIVV
EILDKSGYRDMLEREQTLESRSRLENIDEFMSVPKDYEENTPLEEQSLINFLTDLSLVAD
IDEAQIESGVTLMTMHSAKGLEFPIVFLMGMEESLFPHIRAIKSDDDHEMEEERRICYVA
ITRAEEVLYITHATSRMLYGRSQSNMPSRFLREIPEDLLETPSKQQRQTITPKTSTKQPK
RGFSKRTTSSKKQVSASDWKIGDKVTHKSWGEGMVSNVNEKNGSVELDIIFKSEGPKRLL
AQFAPIEKKED
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattagttaataatatgaataaagagcaaagtgaagcggtaagaactacagaa
ggtccattactaattatggccggcgctggttcaggtaaaacgagagtattaacacatcgt
atcgcctatttattagatgaaaaagacgtttctccttacaatatattagcaattactttt
acaaataaagcagctaaagaaatgaaagaacgtgttgaacaattagtaggagaagaagca
caagtgatttggatgtctacattccactctatgtgcgtaagaatattaagacgtgatgca
gatagaataggcattgaacgtaattttactattattgatcctactgaccaaaaatccgtc
ataaaagacgttctaaaaaatgaaaatattgacagtaaacgctttgaaccaagaatgttt
attggggcgataagtaacttaaaaaatgaacttaaaacaccagaagatgcaataaatgag
gctaatgacttccattcgcaaatggtagctactgtttatagtggataccaacgtcaattg
actcgaaatgaagcacttgattttgacgatttaattatgaaaacaattcagttgttcgaa
cgcattccagatgcacttgaatattatcaaaacaaattccaatatattcacgtagacgaa
tatcaagatacaaataaagcacaatatacattagtaaagttgttagctagtaaatttaaa
aatctttgtgtagttggtgactcagatcagtcaatttatggttggaggggtgcagatatt
caaaatatcctatcttttgaagaagattaccctgatgctaaaacgatatttttagaacaa
aattatcgttctacaaagaccatcctaactgctgcaaatgaagtcattaaacataactca
gaaagaaagcctaaaggtctgtggactgcaaatactggtggcgaaaaaattaaatattat
gaagcaatgactgagcgtgatgaagctgagtatgtggttagagaaataatgaaacaccgt
aaagctggaaaagattatagtgatatggcaatactttatagaaccaatgcacagtcacgt
gttttagaagaaacatttatgaaatctaatcttccttatacgatggttggaggccaaaaa
ttctatgacagaaaagaaattaaagacttattaagttatttgagagtagtagctaatagt
aatgatgaaattagtttacaacgcataatcaatgttccaaaacgagggataggaccttca
tcagttgagaaaattcaacgctatgcgaatgataacaatataagtatgtttgacgcattg
gcagaagtagattttattggtctttcaaaaaaagtaactcaagagtgcattaaattttat
gaactaattcaaaacttaattaaagaacaggaatttttagaggtaagtgaaattgttgtt
gaaatattagataaatctgggtatagagatatgcttgaacgtgaacaaacactggaatca
cgtagtagacttgaaaatatagatgaatttatgtctgtgcctaaagattatgaagagaat
acaccattagaagaacaatccttgattaactttttaacggatttatcactagtagcagac
atcgatgaagctcaaattgaaagtggcgtaacccttatgacaatgcactcggcgaaaggt
ttagaatttccaattgtgttccttatgggaatggaagaatcgctatttccacatatacgt
gcaattaagagtgatgatgaccacgaaatggaagaagaacgtcggatttgttatgtagca
ataacaagagctgaagaagttctatatattacgcacgcgacgtctagaatgttatatgga
cgctcacaatctaatatgccttctagatttttacgtgaaatcccggaagatctattagaa
acaccatctaagcagcagcgtcaaacgattaccccaaaaacttcaaccaaacaacctaag
cgtggatttagcaaacgtacaacgtcttctaaaaaacaagtttctgcttctgattggaaa
ataggagataaagttacgcataaatcatggggtgaaggcatggtaagtaacgttaatgag
aaaaatggctcagttgaattagatattatatttaaatcagaaggaccaaagcgcctgtta
gctcaatttgctccaatcgagaaaaaggaggattaa
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