Staphylococcus haemolyticus JCSC1435: SH1234
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Entry
SH1234 CDS
T00250
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sha
Staphylococcus haemolyticus JCSC1435
Pathway
sha03030
DNA replication
sha03410
Base excision repair
sha03420
Nucleotide excision repair
sha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SH1234 (polA)
03410 Base excision repair
SH1234 (polA)
03420 Nucleotide excision repair
SH1234 (polA)
03440 Homologous recombination
SH1234 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sha03032
]
SH1234 (polA)
03400 DNA repair and recombination proteins [BR:
sha03400
]
SH1234 (polA)
Enzymes [BR:
sha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SH1234 (polA)
DNA replication proteins [BR:
sha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SH1234 (polA)
DNA repair and recombination proteins [BR:
sha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SH1234 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SH1234 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
DNA_pol_A_exo1
HHH_5
PolC_DP2_central
K1-lyase_N
CO_dh
Motif
Other DBs
NCBI-ProteinID:
BAE04543
UniProt:
Q4L732
LinkDB
All DBs
Position
1269552..1272182
Genome browser
AA seq
876 aa
AA seq
DB search
MNKLVLIDGNSLSFRAFYALPLLSNKAGIHTNAVYGFAMLLEKIMREEQPSHFLVAFDAG
KTTFRHSKYSEYKGGRQSTPPELSEQFPYIRQLLDTYHIKHYELENYEADDIIGTLSKEA
NDQGFETIIVTGDRDLTQLATDNVTIYYTKKGVTDVDHYTPEFIAEKYDGLNPNQIIDMK
GLMGDASDNIPGVAGVGEKTAIKLLKQFNTVEGVYDNIDSVSGKKLKEKLENSREDAFMS
KDLATINKNSPIEVTLQDTVLKNQDDNKDKIELFKKLEFKQLLSDIDSNNTEEKHEDKVI
EVSNDFNNINFKELKEAVIHIEVDGTNYLQDTILKFGFYDGVDHVVIDSDQLKEYPELIK
WLENETTEKIVYDAKKTYVVAHRLDIDIKNIVFDVMLASYIIDPSRTIDDVNSVVSNYNQ
NFVQDDISIYGKGKKRHVPEDTILNKHIASITEAIYACKREMVAELESHQQIDLLLNLEL
PLARILSEMEETGIYTDINDLRQMQSEIQGKLDLLISNIHEAAGEEFNINSPKQLGVVLF
ETLELPVIKKTKTGYSTAVDVLEQLQGQHPIIDYILEYRQLSKLQSTYVEGLQKVISKDN
RIHTRFNQTLAQTGRLSSVDPNLQNIPVRLEEGRKIRKAFKPTSNDSVILSADYSQIELR
VLAHITQDESMKEAFINEKDVHTATAMKVFDVEANEVNALMRRQAKAVNFGIVYGISDYG
LSQSLNITRKKAKAFIDDYLASFPGVKQYMSDIVKDAKADGYVETLLHRRRYIPDINSRN
FNLRGFAERTAMNTPIQGSAADIIKLAMVEFDRQIKQTSYHAQLLLQVHDELIFEVPANE
VEDFSLFVEEIMEHALQLDVPLKVDSNYGSTWYDAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaattagttttaattgatggtaatagtttaagttttagagcattttatgcatta
ccactactttctaacaaagcaggaatacatacgaatgcagtatacggttttgctatgtta
ttggaaaagattatgagagaagaacaaccatcgcactttttagttgcgtttgacgccggc
aaaacaacatttagacattcaaaatatagtgaatataaaggcggaagacaaagtacacca
cctgagttaagcgaacagttcccatacattcgacaattattagatacttaccatatcaaa
cactatgagttagaaaattatgaagctgacgatattataggcacattaagtaaagaagct
aatgaccaagggtttgaaacgattatagttactggggatcgagatttaacacagttagca
actgataatgttactatttattacacaaagaaaggtgtaacagatgttgatcattatacg
ccagaattcattgctgaaaaatatgatggacttaatcccaatcaaattatagatatgaaa
ggactaatgggggatgcatctgataacatccctggcgttgctggtgtaggcgaaaagaca
gctatcaagctattgaaacaatttaatacagttgaaggtgtttatgacaatatagattca
gtctctggaaaaaaattaaaagaaaaactcgaaaatagtcgtgaagacgcattcatgagt
aaagacttagcaacgattaataaaaatagtccaattgaagtaacattacaagacactgtg
ttaaaaaatcaagatgataataaagataaaattgaattattcaaaaagttagaattcaaa
caattattatctgatatagatagtaataatactgaagagaaacacgaagataaagtcatt
gaagtgagtaatgattttaacaacataaattttaaagaattaaaagaagctgtgattcac
atcgaagtagatggtaccaattacttacaggatacaattttaaaatttggattttatgat
ggagtggaccatgttgtaatagattccgatcaactaaaggaatatcctgaattgattaaa
tggctagagaatgagactacagaaaaaattgtttatgatgctaaaaaaacatacgttgtt
gcgcatagattagatatagatataaaaaatattgtatttgatgttatgttagcaagttat
attatcgatccatcaagaacgatagatgatgtaaactctgtagtaagtaattataatcaa
aattttgtccaagatgatatttcaatttatggaaaagggaaaaagagacatgtcccagaa
gacacaatattaaataagcatattgcttcaatcacagaggcaatttatgcctgcaaacgt
gaaatggttgctgaattagaatcgcaccaacaaattgatctattgttgaatttagaactt
ccacttgcacgtatcttaagtgaaatggaagaaacaggaatttatacggatattaatgac
ttaagacaaatgcagtcagaaatccaaggaaaattagatttactaataagtaatattcac
gaagcggctggggaagaatttaacattaactctcctaaacaattaggtgtagtattattt
gaaacgctagaactaccagtcattaaaaaaacaaaaactggatattctactgcagttgat
gtgttggagcaattacaaggtcaacacccaataattgactatatacttgaatatcgtcaa
ttatcaaaattacaatccacttatgtagagggattacaaaaagtcataagtaaagataac
agaattcatactcgcttcaatcaaacattagcgcaaactggtcgtttatcaagtgtagat
cctaatttacaaaatataccagtccgtcttgaagaaggacgtaagattagaaaagctttt
aagcctacttcaaatgatagtgtgatattatcagctgactactctcaaattgaattacgt
gtactcgctcatattacccaagatgaaagtatgaaagaagcatttatcaatgaaaaagat
gttcatactgctactgcgatgaaagtatttgatgtagaagcgaatgaagttaacgcttta
atgcgaagacaggctaaagctgttaactttggaatagtgtatggtattagtgattatggt
ttgagccagagcttaaacattactcgaaaaaaagcaaaagcatttatagatgattatttg
gcaagttttccaggtgtaaaacaatacatgtctgatattgttaaagatgcgaaagcagat
ggatatgttgaaacattattgcaccgtcgcagatatataccagatattaatagtaggaac
tttaatttgagaggttttgctgaacgtacggcaatgaatactccaatacagggtagtgca
gcagatattattaaattagcaatggtagaatttgatagacaaattaaacaaacgtcttat
catgctcagttattactacaagtacatgatgaattaattttcgaagtacctgccaatgaa
gttgaagattttagtttatttgttgaggaaattatggaacacgcattacaattagatgtg
ccgttaaaagtagattctaactatggatctacatggtatgatgcaaaatag
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