Staphylococcus haemolyticus JCSC1435: SH1300
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Entry
SH1300 CDS
T00250
Name
(GenBank) unnamed protein product; hypothetical protein, similar to exodeoxyribonuclease V
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sha
Staphylococcus haemolyticus JCSC1435
Pathway
sha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SH1300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sha03400
]
SH1300
Enzymes [BR:
sha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SH1300
DNA repair and recombination proteins [BR:
sha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SH1300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
AAA
AAA_12
nSTAND3
AAA_18
HHH_5
NPHP3_N
Rad17
NTPase_1
T2SSE
AAA_28
UvrD-helicase
TsaE
AAA_14
AAA_16
ABC_tran
HHH_3
Mg_chelatase
RsgA_GTPase
Helicase_RecD
AAA_29
AAA_7
Queuosine_synth
AAA_17
DUF815
AAA_5
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
BAE04609
UniProt:
Q4L6W6
LinkDB
All DBs
Position
1335222..1337660
Genome browser
AA seq
812 aa
AA seq
DB search
MSDPTLFDYSMIKGTVDAILFQNNDNFYTVIKVETIETNESFGNLPTVVGFFPNIVEGDV
YTFKGQVVEHPRYGKQLKADTFEKEVPQTKDAIITYLSSDLFKGIGKKTAQNIVNTLGEN
AINDIMTDASVLEKVSNLPKKKQKQIADQINANQESEKIMIRLHDLGFGPKLSMAIYQFY
QSETLNVLENNPYQLVYDIKGIGFNKADTLARNNGISFNDPERLKAGLLYTLEEECIKQG
HTYLSLDYAIEVTLDMLMDAHSSDSIDSKQLENILELLNEEQKIIVNNERVAIPSLYYSE
LKSVQNLYRIKTYKHKLKEIEQSDLQIHIGDIETSNNVHYAPSQKEALQTAINSKIMLLT
GGPGTGKTTVIKGIVELYAEVHGLSLSYSDYQEDDYPIVLAAPTGRASKRLQESTGLEAM
TIHRLIGWNQETQPEDILDNEIKAKLIIIDEMSMVDTWLFHQFLSAVPLDAQIILVGDED
QLPSVGPGQIFKDLIDSKAIPRVNLTEVYRQQDGSSIIDLAHRMKHGEPIDITKRFHDRS
FISCNVDQIPKVVEKVVSSAVNKGYDMSDIQVLAPMYKGNAGIKRLNQVLQDILNPKAQD
TREIEFGDIKFRKGDKVLQLVNRPNDNIFNGDIGIIVGIFWAKENALNKDVMVVDFEGNE
ITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKQSLVL
LGDSTAFEIGLNTQGQLRHTQLQELILSYFDIDHKQSDVTISNTVSKDEEAMNTIHDVDT
KDDQVILSESTLYQINPMINMGDVSPYDFVER
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccctacactatttgattattcaatgattaaaggtactgtagatgctatttta
tttcaaaataatgataatttctatacagtcattaaagtggaaacaattgaaactaatgaa
tcatttggtaatttaccaacagttgtagggttctttccaaatattgtggaaggagatgta
tacacttttaaaggacaagtggtagagcacccacgttatggcaagcaattgaaagccgac
acttttgaaaaagaggtccctcaaactaaggatgctattattacatatttatcaagtgac
ttattcaaaggtataggtaaaaaaactgctcaaaatattgtaaatacacttggtgaaaat
gcgataaatgatattatgacagacgcatcagttttagagaaggtttcaaatttaccgaaa
aagaaacaaaagcaaattgctgatcaaattaatgccaatcaagagtccgaaaaaattatg
attcgattacatgatttaggcttcggacctaaattatcaatggcgatttatcaattttac
caatccgagactttaaatgtgctcgaaaataacccttatcaactcgtttatgatattaaa
ggaattggttttaataaagctgatactttagctagaaataatggcattagttttaatgat
ccagaacgattgaaagccggattattatatacgctagaagaagaatgtataaaacaaggt
cacacctatttatcactagattatgccattgaagtgacattagacatgctaatggatgct
cattccagtgatagtatcgattcaaaacagcttgaaaatattctcgaattattaaatgag
gaacaaaaaattattgtaaacaatgagcgagtcgccattcctagtctttattactccgaa
ctcaaaagtgttcaaaatttatatcgaattaaaacatacaaacataagctaaaagaaata
gaacaatctgatttacagatacatataggggatatagagactagtaataatgtacattat
gcaccatctcaaaaagaggccttacaaactgcaattaattctaaaattatgcttttaacc
ggtggtcctggtacaggtaaaacaacagtaatcaaaggaatcgttgagctttatgcagag
gtacatggtctttctcttagttactcagactatcaagaagatgactatcctattgtcctt
gcagcaccaacaggtagagcatctaaacgattacaagaatctacagggttggaagcaatg
acaattcatcgtctaattggatggaatcaagaaacacaaccagaagacattctagataat
gaaattaaagcaaagctcataattattgacgaaatgtcgatggtagatacatggttgttt
caccaatttttaagtgcagttcccctagatgcacaaattattttagtcggtgatgaagat
caattaccttcagttggaccaggtcaaatatttaaggatcttattgattcgaaggcaata
cctcgagttaatctaactgaagtttatcgtcaacaagatggttcaagtatcatcgattta
gcgcatcgtatgaaacacggtgagccaatagatattacaaagcgttttcatgataggagt
tttataagttgtaatgtcgatcaaattcctaaagtagttgaaaaagtagtttcaagtgca
gttaataagggttatgatatgagtgatattcaagtcttggcgcctatgtataagggtaac
gcaggtattaaaagattaaatcaagtattacaagatattttaaaccctaaggcacaagat
acacgagaaattgaatttggtgatataaagtttcgtaaaggtgataaggttcttcagtta
gttaatcgtcctaatgataatatcttcaatggtgacataggaataattgttggtatattt
tgggctaaagaaaatgctttaaataaagatgttatggttgttgatttcgaaggtaacgag
attactttcactcgtcaagatttattagaattaacacatgcttattgcacatctattcat
aaatcacaaggatctgaatttcctattgtaattatgcctatcgtcaagcagtattttaga
atgttacagcgaccaatactttatacaggacttacacgtgctaaacaatcattagtatta
cttggagattcaaccgcatttgaaattggattaaatacgcaaggacaattacgacataca
caattgcaagagctaatcttgtcatattttgatatagaccataaacaaagtgatgtaaca
atttcaaatactgtgagtaaagatgaagaggcaatgaatacaattcacgacgttgatact
aaagatgatcaagtcattttaagtgaatctacgttatatcaaatcaatccaatgattaat
atgggggatgtttctccttatgattttgttgagcgttga
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