Staphylococcus haemolyticus JCSC1435: SH1627
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Entry
SH1627 CDS
T00250
Name
(GenBank) unnamed protein product; similar to unknown protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sha
Staphylococcus haemolyticus JCSC1435
Pathway
sha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SH1627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sha03019
]
SH1627
Messenger RNA biogenesis [BR:
sha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SH1627
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF3139
UPF0154
Glt_symporter
Motif
Other DBs
NCBI-ProteinID:
BAE04936
UniProt:
Q4L5Y9
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All DBs
Position
complement(1672999..1674558)
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AA seq
519 aa
AA seq
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MNLLNLLLILLGIILGVVVGYFVARNLLHQKQLQARQTADDIIKQGQKEADNIKKEKLLE
AKEENQIIREQTESELRERRGELQRQEARLLQKEENLDRKSDLLDKKDEILEQKESKLEE
RQQQVDAKESSVQTLIMKHEQELERISGLTQEEAVNEQLQRVEEELSQDIAVLVKEKEKE
AKEKVDKKAKELLATTVQRLAADHTTESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEEMVDKARKEVDDIIRD
AGEQATFEINVHNMHPDLVKVLGRLNYRTSYGQNVLKHSIEVAHLSGMLAAELGEDVSLA
KRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYAENETVINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIRRLERLETLSEGYDGVEKAFAIQAGREIRVIVSPDEIDD
LKSYRLARDIKTQIEDELQYPGHIKVTVVRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattaaacctcctactcattttgctggggattattctaggggttgttgtgggg
tattttgtagcccgaaatttattgcatcaaaagcaattacaagctagacaaactgctgat
gatattattaagcaaggtcaaaaagaagcagataatatcaaaaaggaaaaattattagag
gcaaaagaagaaaaccaaatcataagagaacaaactgaatcagaactacgtgaaagacgt
ggtgagcttcaaagacaagaagcccgacttcttcaaaaagaggaaaatttagatcgaaaa
tctgatcttctcgataaaaaagatgagattttagaacaaaaagaatctaaacttgaagaa
agacaacaacaagtagatgcaaaagagagtagtgttcagacattaataatgaagcatgaa
caagaattagaacgcatctccggtctcactcaagaagaagctgtaaatgaacaacttcaa
agggttgaagaagaactgtcacaagatattgcagtacttgttaaagaaaaagagaaagaa
gctaaagaaaaagttgataaaaaagcaaaagaattattagctactaccgttcaaagatta
gctgctgaccatacaactgaatcaacagtttcagtagttaatttaccaaatgatgagatg
aaaggtcgtatcattggtagagaaggtagaaatattagaactttagaaacattaacaggt
attgatttaatcattgatgatacaccagaagcggttattttatctggttttgatccaatt
agacgtgaaatcgcgcgtacagcattagttaatttagtctcagatggacgcatccatcca
ggcagaattgaagaaatggtagataaagctagaaaagaagtagatgacattattagagat
gctggtgaacaagcaacattcgaaatcaatgttcataatatgcacccagacttagttaaa
gtcttaggtcgtctaaattatagaactagttatggtcaaaacgtcttgaaacattctatt
gaagtggcgcatttatctggaatgctagctgctgaactaggagaagatgttagcttggcc
aaacgtgctggattacttcacgatgttggtaaagcgatagatcatgaggttgaaggtagc
cacgtagaaataggtgttgaattagctaaaaaatatgcagaaaatgaaactgtaattaat
gctattcactctcatcatggtgatgttgaacctacttctattatttcaattctggtagca
gctgctgacgcattatctgcggctagaccaggtgctcgtaaagaaacgcttgaaaactat
atacgtagattagaacgcttagaaacactttctgaaggttatgatggtgtagaaaaagca
ttcgctattcaagcaggtcgagaaattagagttattgtttcccctgatgaaatagatgac
ttgaagtcatacagactggctagagacatcaaaacgcaaatagaagatgaattacaatat
cctggtcacatcaaagtgacagttgtaagagagacaagagcagtagagtatgcgaaataa
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