Staphylococcus haemolyticus JCSC1435: SH1638
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Entry
SH1638 CDS
T00250
Name
(GenBank) unnamed protein product; similar to unknown protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sha
Staphylococcus haemolyticus JCSC1435
Pathway
sha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SH1638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sha03019
]
SH1638
Messenger RNA biogenesis [BR:
sha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SH1638
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
vATP-synt_E
SBE2_C
HTH_10
Motif
Other DBs
NCBI-ProteinID:
BAE04947
UniProt:
Q4L5X8
LinkDB
All DBs
Position
complement(1686156..1687829)
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AA seq
557 aa
AA seq
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MSLVKKKNDDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEMLGVDIVIPDIQ
YVIENKEKLKGIFLSHGHEHAIGAVSYILEQIDAPVYGSKLTLALVKENMKSRNVKKKVR
YYTVNHDSVMRFKNVNITFFNTTHSIPDSLGICIHTSYGSIVYTGEFKFDQSLQGHYTPD
IKRMAEIGEEGVFALISDSTEAEKPGYNTPENVIESHIYDAFAKVKGRLIVSCYASNFIR
IQQVLNTASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPINEVGNYPKNEVVIIA
TGMEGEPIEALSQMAQQKHRIMNIEEGDSVYLAITASANMEVIIADTLNELVRAGAYIIP
NNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLANESGVAPEKIFLVEK
GDVIHYDGKDMVLNEKVNSGNILIDGIGVGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR
RIAAGPEIQSRGFVYVRESEELMKEAEDKVREIVEAGLQEKRIEWSDIKQNMRDQISKLL
FESTKRRPMIIPVISEI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttagtgaaaaaaaagaatgacgatattcgcatcattccacttggtggtgtcggc
gaaatcgcaaaaaatatgtatatcgttgaagtagacgatgaaatgtttatgttagatgcg
gggttaatgttcccagaagatgaaatgttaggtgtagatattgtaattcctgacattcaa
tatgtcattgaaaataaagaaaaactaaaaggtatctttctaagccatggtcatgaacat
gctattggtgcagttagctacattttagaacaaattgatgcaccagtatatggctctaaa
ttaacgttagcacttgttaaagaaaatatgaagtcacgtaatgttaaaaagaaagtacgt
tattatactgtaaatcatgattcagtaatgagatttaaaaatgttaatattactttcttt
aacactacacacagcattcctgatagtttaggaatttgcattcatacttcatacggttca
atcgtttatacaggtgaatttaaatttgatcaaagtttacaaggacactacacgccagat
atcaaacgtatggctgaaataggtgaagaaggtgtcttcgcattaatcagtgactctaca
gaagctgagaaaccaggatataatacacctgagaatgttatagaatcacacatttacgat
gcttttgcgaaagtaaaaggacgcttaattgtgtcatgctatgcttcaaactttattaga
attcaacaagttttgaacactgcaagtaaactaaatcgtaaagtttcctttttaggtcgt
tcgcttgaaagttcgtttaatattgcacgtaaaatgggatattttgacattcctaaagac
ttgttaatccctattaacgaagttggaaattatcctaaaaatgaagtcgtaattattgcc
actggtatggaaggcgaacctatcgaagcattgagccaaatggcccaacagaaacacaga
ataatgaatattgaagaaggcgattcagtatatttagcaatcacagcatcagctaatatg
gaagttatcattgctgatacactaaatgaattagtgcgcgcaggtgcatatattattcct
aacaataaaaagattcatgcatctagtcatggttgcatggaagaattaaaaatgatgatt
aatattatgaaacctgaatactttatccctgttcaaggtgaatttaaaatgcaaattgcg
catgctaaattggctaacgaatctggtgtggcgccggagaaaattttcttagtcgaaaag
ggagacgttattcattacgatggtaaagatatggtattaaacgagaaagttaattctggc
aatattcttatcgatggtattggtgtaggagatgtcggtaatatcgtattgagagatcgt
catttacttgcagaagatggtatttttattgcagttgttacattggatccgaaaaataga
cgaattgctgctggtcctgaaattcaatcacgtggctttgtatacgtccgtgaaagtgaa
gaactaatgaaggaagcagaagataaggttcgtgaaattgttgaagcaggtcttcaagag
aaacgtattgaatggtctgacatcaaacagaatatgcgagatcaaatcagtaaattacta
tttgaaagtacaaaacgtcgtccaatgattattccagttatttcagaaatttaa
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