Staphylococcus haemolyticus JCSC1435: SH1639
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Entry
SH1639 CDS
T00250
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sha
Staphylococcus haemolyticus JCSC1435
Pathway
sha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SH1639 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sha03019
]
SH1639 (pnpA)
03016 Transfer RNA biogenesis [BR:
sha03016
]
SH1639 (pnpA)
Enzymes [BR:
sha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SH1639 (pnpA)
Messenger RNA biogenesis [BR:
sha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SH1639 (pnpA)
Transfer RNA biogenesis [BR:
sha03016
]
Prokaryotic type
tRNA degradation factors
SH1639 (pnpA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
OB_RRP5_4th
KH-I_KHDC4-BBP
SPATA25
OB_PDCD11
Motif
Other DBs
NCBI-ProteinID:
BAE04948
UniProt:
Q4L5X7
LinkDB
All DBs
Position
complement(1688037..1690139)
Genome browser
AA seq
700 aa
AA seq
DB search
MSQEKKVFKTEWAGRSLTIEIGQLAKQANGAVLVRYGDTVVLSTAVASKEPRDGDFFPLT
VNYEEKMYAAGKIPGGFKKREGRPGDEATLTARLIDRPIRPLFPKGYRHDVQIMNTVLSA
DPDCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGYVDGKYVINPTVEEKEVSRLDLEVA
GHKDAVNMVEAGASEITEKEMLEAIFFGHDEIKRLVAFQEEVVAHIQPVKKEFVPVERDE
ALVSRVKTLTEEKGLKETVLTFDKQQRDENLDTLKAEIATEFVDEADPENELLIDEVYAI
LNDLVKEEVRRLIADEKIRPDGRKPDEIRPLESEVGLLPRAHGSGLFTRGQTQALSVLTL
GALGDYQLIDGLGPEQEKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALKYIIP
DTTEFPYTVRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTREDSYT
ILTDIQGMEDALGDMDFKVAGTKEGITAIQMDIKIDGLTREVIEEALEQARQGRLAIMDH
MLQTIDQPRKELSAYAPKVEIMHIKPEKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIF
IGAIDQDMINRAREIIEDITREAEVGQVYNAKVKRIEKYGAFVELFAGKDALLHISQISK
ERINKVEDVLSIGDSIDVKITEIDKQGRVNASHKALDENK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaaaagaaagtgtttaaaactgagtgggctggaagatcgttaacgattgag
atagggcaattagcaaaacaagctaatggtgcagttttagtacgttatggagatacggtt
gtattatctacggctgtagcatctaaagaacctcgtgatggtgactttttcccattaaca
gttaactatgaagaaaaaatgtatgctgctggtaaaattccaggaggatttaaaaaacgt
gaaggtcgtccaggagacgaagcaacattaactgcacgtttaattgatagaccaattcga
ccacttttccctaaaggatatcgacatgacgttcaaattatgaacacagtactaagcgct
gatccagattgttcgcctgaaatggctgctatgataggttcttcaatggcattaagtgtt
tcagatattcctttccaaggaccaattgctggtgttaatgtaggttatgttgatggtaaa
tatgtaattaaccctaccgttgaggaaaaagaagtttcacgtctagacctagaagttgcc
ggccataaagacgctgtaaacatggtagaggctggtgcaagtgaaataactgagaaagaa
atgttagaagctattttcttcggacatgatgaaatcaaacgtttagtagcattccaagaa
gaagtggtagctcacattcagcctgttaaaaaagaatttgtacctgtagaacgtgatgaa
gcactggtttcaagagttaaaacacttactgaagaaaaaggcttaaaagaaacagttcta
acatttgataaacaacaacgtgacgaaaacttggatacgttaaaagctgaaattgcaact
gaatttgttgacgaagcagatcctgaaaatgaattgttaattgatgaagtttatgcaatt
ttaaatgacttagttaaagaagaagtacgtcgtcttatcgctgatgaaaaaattagacct
gatgggcgtaaaccagatgaaattagaccacttgaatctgaagttggtttattgccacga
gcacatggctcaggtttatttacacgtggacaaactcaagctttatctgtattaacatta
ggagcattaggtgattatcaacttattgatggactaggtcctgaacaagaaaaacgattc
atgcatcattacaacttccctaatttctctgttggagagacaggcccagttagagcacct
ggtcgtcgtgagattggacatggtgcattaggcgagagagcactaaaatacattattcca
gatacaactgaattcccttacactgtacgtattgtaagtgaagtattagaatctaacggt
tcatcttcacaagcatcaatttgtggttcaactttagctttgatggatgctggtgtgcca
attaaagcgcctgttgcaggtatagcaatgggactagtcacacgtgaagatagttatacg
attcttacggatattcaaggtatggaagatgctttaggagatatggattttaaagttgca
ggtacaaaagaaggtatcactgcgatacaaatggacattaaaattgatggtttaacacgt
gaagtcattgaagaagctctagaacaagctcgacaaggtcgattagcgataatggatcac
atgttacaaacaattgatcaacctcgtaaagaattaagtgcttatgctcctaaagtggaa
ataatgcatattaaacctgaaaaaattagagacgtaattggaccaggtggtaagaaaatt
aatgaaatcattgatgaaactggggttaaattagatattgaacaagatggtacaatcttc
ataggtgcaatcgatcaagacatgattaaccgtgctcgtgaaattattgaagatatcaca
cgtgaagcggaagtaggccaagtttacaatgcaaaagttaaacgtattgaaaagtatggt
gcttttgttgaattgtttgccggtaaagatgctttattacacatctctcaaatttcaaaa
gagcgtattaataaagtagaggatgtattaagtataggcgattcaattgacgtgaaaata
actgaaattgacaaacaaggtcgcgtaaatgcttctcataaagcattagatgaaaataaa
taa
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