Staphylococcus haemolyticus JCSC1435: SH1642
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Entry
SH1642 CDS
T00250
Symbol
truB
Name
(GenBank) tRNA pseudouridine 5S synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sha
Staphylococcus haemolyticus JCSC1435
Brite
KEGG Orthology (KO) [BR:
sha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sha03016
]
SH1642 (truB)
Enzymes [BR:
sha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SH1642 (truB)
Transfer RNA biogenesis [BR:
sha03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SH1642 (truB)
Prokaryotic type
SH1642 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Nucleocapsid-N
Motif
Other DBs
NCBI-ProteinID:
BAE04951
UniProt:
Q4L5X4
LinkDB
All DBs
Position
complement(1691644..1692561)
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AA seq
305 aa
AA seq
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MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVSGVLPVCIGTATRVSDYV
MDMGKSYNATITLGESTTTEDQTGEVIDKIDVQANAININEVDAVLKQFEGIIEQVPPMY
SSVKVNGKKLYEYARKGETVERPIRKVNIDSIARTSELQFEDGKCHFNIEVKCGKGTYIR
TLATDIGKQLGYPAHMSLLTRINSGGFDIKDSITLDQISQLHEQDTLQPHLFPLEYGLKS
LPKIYVSDENIKTRILNGQKFNKKQFNQTIEQQLVFIDSETEKVMAIYIQHPEKNHEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtataatggtattttacctgtatataaagagcgtggattgacgagtcatgatgtcgtc
tttaagctaagaaaaatcttaaaaactaagaaaataggtcatactgggacattagatcct
gaagtttctggggtattgccagtatgtattggtactgccactcgtgtaagtgattatgtg
atggatatgggaaaatcttataacgctaccataactctaggggaaagtacgacaacggaa
gatcaaacaggagaagttattgataaaatagatgtacaagcaaacgcaataaatataaac
gaagtagacgctgttttaaaacaatttgaaggaattatagaacaagttccacctatgtat
tcatctgttaaagtaaatggtaaaaagttatatgagtatgcacgtaaaggtgaaactgtt
gaacgaccaattcgtaaagtaaatatagattcgatagcacgcacctctgaacttcaattc
gaagatgggaaatgtcattttaatattgaggttaagtgtggtaaaggtacatatattcgc
acattagcaacggatattggtaaacaattagggtatccagctcacatgtcgctattgaca
cgaataaattcaggtgggtttgacattaaagatagtataacattagatcaaatctctcaa
ttacatgagcaagacacattacaaccacacttatttcctttagaatatggtttgaaaagt
ttgccgaaaatttatgtttctgatgaaaatataaaaactagaatattaaatggacaaaag
tttaataaaaaacaatttaatcaaacgattgaacaacaacttgtctttattgattctgag
acggagaaagtaatggcaatttatattcaacatccggaaaaaaatcatgaaataaaacct
aaaaaagtatttaattaa
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