Staphylococcus haemolyticus JCSC1435: SH1856
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Entry
SH1856 CDS
T00250
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sha
Staphylococcus haemolyticus JCSC1435
Pathway
sha00010
Glycolysis / Gluconeogenesis
sha00020
Citrate cycle (TCA cycle)
sha00260
Glycine, serine and threonine metabolism
sha00280
Valine, leucine and isoleucine degradation
sha00310
Lysine degradation
sha00380
Tryptophan metabolism
sha00620
Pyruvate metabolism
sha00630
Glyoxylate and dicarboxylate metabolism
sha00640
Propanoate metabolism
sha00670
One carbon pool by folate
sha00785
Lipoic acid metabolism
sha01100
Metabolic pathways
sha01110
Biosynthesis of secondary metabolites
sha01120
Microbial metabolism in diverse environments
sha01200
Carbon metabolism
sha01210
2-Oxocarboxylic acid metabolism
sha01240
Biosynthesis of cofactors
Module
sha_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sha_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sha_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sha_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SH1856 (pdhD)
00020 Citrate cycle (TCA cycle)
SH1856 (pdhD)
00620 Pyruvate metabolism
SH1856 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
SH1856 (pdhD)
00640 Propanoate metabolism
SH1856 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SH1856 (pdhD)
00280 Valine, leucine and isoleucine degradation
SH1856 (pdhD)
00310 Lysine degradation
SH1856 (pdhD)
00380 Tryptophan metabolism
SH1856 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SH1856 (pdhD)
00670 One carbon pool by folate
SH1856 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sha04147
]
SH1856 (pdhD)
Enzymes [BR:
sha01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SH1856 (pdhD)
Exosome [BR:
sha04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SH1856 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
HI0933_like
FAD_oxidored
GIDA
FAD_binding_2
NAD_binding_8
FAD_binding_3
DAO
AlaDh_PNT_C
3HCDH_N
UDPG_MGDP_dh_N
Thi4
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
BAE05165
UniProt:
Q4L5B0
LinkDB
All DBs
Position
complement(1903895..1905301)
Genome browser
AA seq
468 aa
AA seq
DB search
MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLH
ASHRFVEAQHSENLGVIAESVSLKFDKVQEFKKSVVNKLTGGVEGLLKGNKVEIVKGEAY
FVDNNSLRVMDEKSAQTYNFKHAIIATGSRPIEIPNFEFGKRVIDSTGALNLQEVPGKLV
VVGGGYIGSELGTAFANFGSDVTILEGAKEILGGFEKQMVQPVKKGMKEKGVEIITEAMA
KNAEETENGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGLKFADRGLLEVDK
QSRTSIDNIYAIGDIVPGLPLAHKASYEAKVAAEAISGQASEVDYIGMPAVCFTEPELAQ
VGYTEAQAKEEGLDYKASKFPYAGNGRALSLDDTTGFVKLITLKEDDTVIGAQIAGNGAS
DIISELGLAIEAGMNAEDIALTVHAHPTLGEMSMEAAEKAIGMPIHTM
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggtagttggagatttcccaattgaaacagatactattgtaatcggagcaggtcctggt
ggatatgttgcagcaattcgcgcagcacaattaggacaaaaagttactatcgttgagaaa
ggtaacttaggtggtgtatgcttaaacgttggttgtattccttcaaaagcattattacac
gcttcacaccgctttgtagaagctcaacactctgaaaacctaggtgttatcgctgaaagc
gtatcacttaaattcgacaaagttcaagaattcaaaaaatcagttgtaaacaaattaact
ggtggtgttgaaggcttattaaaaggtaataaagttgagattgtaaaaggtgaagcttat
ttcgttgataataacagcttacgcgttatggatgaaaaaagtgcacaaacttacaatttc
aaacacgctattatcgcaacaggttctagaccaattgaaattcctaactttgaatttggt
aaacgtgttatcgattcaacaggtgcattaaacttacaagaagttccaggtaaattagtc
gttgtaggtggcggttacattggttcagaacttggtacagcatttgctaactttggttca
gacgttacaattttagaaggcgctaaagaaattcttggcggattcgaaaaacaaatggtt
caaccagttaaaaaaggcatgaaagaaaaaggcgttgaaatcattactgaagcaatggct
aaaaatgctgaagaaactgaaaatggcgttaaagttacttatgaagctaaaggtgaagaa
aaaactatcgaagctgattatgtattagtaactgttggtcgtcgtccaaacacagacgaa
ttaggtttagaagagttaggacttaaattcgcagatcgtggattattagaagtagataaa
caaagccgtacttctatcgacaatatttatgcaattggtgatatcgttcccggtttacca
cttgctcataaagcaagttatgaagctaaagtagctgctgaagctatctctggtcaagca
tcagaagtagactacatcggtatgccagctgtatgtttcactgaaccagaattagctcaa
gtaggttacacagaagcacaagctaaagaagaaggtttagactacaaagcttctaaattc
ccttatgctggtaacggccgtgctttatcattagatgatacaactggtttcgttaaactt
atcacacttaaagaagacgatactgttatcggtgcacaaattgccggtaatggcgcttca
gatatcatttctgaattaggtttagctatcgaagctggtatgaatgctgaagatatcgca
ttaacagtacatgctcacccaacattaggtgaaatgtctatggaagctgctgaaaaagca
attggaatgccaatccacacaatgtaa
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