Staphylococcus haemolyticus JCSC1435: SH1983
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Entry
SH1983 CDS
T00250
Name
(GenBank) unnamed protein product; hypothetical protein, similar to ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sha
Staphylococcus haemolyticus JCSC1435
Brite
KEGG Orthology (KO) [BR:
sha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sha03400
]
SH1983
Enzymes [BR:
sha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SH1983
DNA repair and recombination proteins [BR:
sha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SH1983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Viral_helicase1
DEAD
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAE05292
UniProt:
Q4L4Y3
LinkDB
All DBs
Position
complement(2034293..2037970)
Genome browser
AA seq
1225 aa
AA seq
DB search
MNNIPIKPKDAQWTDAQWKSIYANGQDVLVAAAAGSGKTAVLVERIIQKIIRDEIDVDKL
LVVTFTNLSAREMKHRVDQRIQQASIEDPRNEHLKNQRIKIHQAQISTLHSFCLKIIQQH
YDVIDLDPNFRTISDVENVLLLEQSIDEVLEKHYDTPDIEFLTLVEQLSSDRNDDNFRDL
LKRFYNFSIANPSPFEWLDSLVEIYTDDNKHKLYLDELERLSKIYIKAAYHTLLEAENNF
LNCIEAEKHLDVIKLEKFKCEKMIEGNVINFEEIINYTSEKLPTITKKLKDTNEDEGISS
QFLTNAKDFFDDYKKLLSEVKNKYLMRSYEDLKVDMKRLAPRIQYLVQIVKDIINGFAEK
KRSRNVLDFSDYEHFALQILTDQEGNASPIAKEYRSQFEEILVDEYQDTNQVQEAIISKI
KRGDESNGNLFMVGDVKQSIYKFRQADPTLFMDKYHRFTKDGDQSGLRIDLSKNFRSRKE
VLATTNYLFDHMMDEEVGEIEYDADARLYFGATKYSDKSMPLELHALIQDKSSDNDLEKS
EQEARYIAEQVKYIIEHKQVYDMKSETYRQATFKDIVILERGLKNARNLQQVFKDYNIPF
HVNSKEGYFEQTEVRLVLSFLRTVDNPLQDIYLVGLMRSVIYQFTEDELANIRVQSMNDD
YFYQSILHYMKDQEANPLLVEKLEHFMDDINMYQEYSQSHPVYQLIDKFYNDHYVIQYFS
GLIGGKGRRANLYGLFNKAVEFENSSFRGLYQFIRFIDELIERNKDFGEENVIGPNDNVV
RMMTVHSSKGLEFPYVIYSELSKNFNKGDLRKPLILNQKYGLGIDYFDLEQNVTYPSLSS
VVIKSITEKELISEEMRLMYVALTRAKEQLILIGTIDKEEALEKLERLPISGNQIALHKR
LSADRPFDLIYSILAKYQSTSLLPEYRFEKSIDNLDESLRPTVDIKIAQFEELSIEDSES
EQESRNISDLEVEGSHDDTLKQQINDQLSFKYPYLKDTEKPSKQSVSELKRQLETEESGT
SYERVRQYRIGVSTYERPKFLRENKKRKANEIGTLMHTVMQHLPFKETRMTETELNDYIN
ELIEKHIIEEDAKKDIQFEAVMNFIRSDLYMTITQADKVYRELPFVVNQARVDEMPESDE
DVSIIQGMIDLIFLKDDQYYFVDYKTDAFNKRRGMTDEEVGIQLRDKYKIQMKYYKNTLE
TILNSKVYGYLYFFQFGQMSIEEDV
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgaataacatccccatcaaacctaaagatgctcaatggacagatgcacagtggaagagt
atatacgctaatggtcaagatgtattagtagctgcagcagcagggtctggtaaaactgca
gtattagtagaaagaattattcaaaaaattattagagatgaaatagatgttgataagtta
ctcgttgttacttttactaatttaagtgcgagagaaatgaagcatcgtgttgatcagcgc
attcaacaagcgtcaatagaagatcctagaaatgaacatttaaagaatcaacgcattaaa
attcaccaagcacaaatttcgacattacatagcttctgtttaaagattattcaacagcat
tatgatgtcattgatttggatcctaatttccgcacaattagtgatgtagagaatgtactg
ttacttgaacagtctattgatgaagttttagaaaaacattatgatacaccggatattgaa
tttcttactttagtagaacaattatcaagtgatcgtaatgatgataattttagagatttg
ttaaaacgtttctataatttcagtatagccaatccttcaccgtttgagtggttggattca
ttagttgaaatttacacggacgataataaacataaattatatctagacgaattagaaaga
ttatcgaaaatttatatcaaagctgcatatcatactttgttagaagcggaaaataacttt
ctaaattgtatagaggcggaaaagcatttagatgttatcaagctagaaaaatttaaatgc
gaaaaaatgattgagggtaatgtgataaattttgaagaaatcattaattatacctctgaa
aaattgcctacaataacaaaaaaattaaaagatactaatgaagatgaaggtataagttct
caatttttaacaaacgctaaagatttttttgatgattataaaaaactattatcggaagta
aaaaataagtatctaatgcgttcttatgaagatttaaaagtagatatgaaacgtttggct
cctagaattcaataccttgtacaaatcgttaaggatattattaatggctttgctgaaaaa
aaacgtagtcgcaatgtactggatttttctgattatgaacacttcgctttacaaatatta
actgaccaagagggcaatgcttcgcctattgctaaagaatatcgatcacaatttgaagag
attttagtagatgaataccaagatacgaaccaagtacaagaagcaatcatatctaaaatt
aaacgtggtgacgaatctaatgggaatttattcatggtaggtgacgttaaacaatctatc
tataaatttagacaggctgatccaacgttatttatggataaatatcatcgtttcacaaaa
gatggcgatcaatcagggttacgtatcgatttatctaagaatttccgttcacgtaaagaa
gtactcgccacaacaaactacttatttgaccatatgatggatgaagaagtaggtgaaatt
gagtacgatgctgatgcgagactttattttggtgctactaaatattctgataaatctatg
cctcttgaactacatgcattaattcaagataaaagtagcgataatgatttagaaaagtca
gaacaagaagctcgctatattgctgagcaagttaaatatattattgagcataaacaagtt
tatgatatgaagtcagaaacttatagacaagctactttcaaagatatcgtcatacttgaa
agagggttgaaaaatgcgcgcaatttacaacaagtatttaaagactataatattccgttc
catgtaaatagtaaggaagggtactttgaacaaactgaagtacgtctcgtcttatcattt
ttaagaaccgttgataatcctttacaagatatatatttagtaggattgatgagatcggtt
atataccaatttacggaagatgaattagcaaacattcgagttcaaagtatgaacgatgat
tatttctatcaatctatattgcattatatgaaagatcaagaagcgaaccctttgttagtt
gagaaattagaacattttatggatgatataaacatgtatcaagaatatagtcaatctcat
cctgtgtatcaactaattgataagttttataatgatcattacgttattcaatattttagt
ggtcttattggtggtaaaggtagacgcgcgaatctatatggattgtttaataaagcagta
gaatttgaaaattcaagttttagagggctgtatcaatttataagatttattgacgaacta
atagaacgcaataaagactttggtgaagagaatgttataggtcctaatgataatgtggta
cgtatgatgacagttcatagtagtaaaggtttagagttcccatatgttatttattcggaa
ctttcaaagaattttaataaaggcgacttacgtaaaccactcatcttaaatcaaaaatat
ggtctaggtattgattattttgatttagaacaaaatgtaacctatccgtcattatcgtca
gttgtcattaaatcaattactgaaaaagaacttatttctgaagaaatgcgattgatgtat
gtagctttaacgcgagcgaaagagcaactcattcttattggtactattgataaggaagaa
gcattagaaaaacttgagcgattaccaatttcaggtaatcaaattgcattgcataaacga
ttatcagcagatcgaccttttgatttaatatacagtattttggctaaataccaatctaca
tctttattaccagaatatcggtttgagaaatccattgataatttagatgagagtctgcgt
cctactgtagatattaaaattgcacaatttgaagaactttcgattgaggacagtgaatcg
gaacaagaaagtcgaaatatttcagatttagaagtagaaggttcacatgatgatacgtta
aaacaacaaattaatgatcaattgtcatttaaatatccgtatttaaaagatacggagaaa
ccatctaaacagtctgtttcagaattaaagcgtcaattagaaacagaagaaagtggtaca
agttacgaaagggtaagacagtaccgtataggtgtatcaacttatgagagacctaagttt
ttacgtgaaaataaaaagcgtaaagcaaatgaaattggtactttaatgcatacagtcatg
caacatctaccatttaaagaaacgcgtatgactgaaacagaattgaatgactatattaat
gaattaattgaaaagcatattattgaagaagatgctaaaaaagatattcaatttgaagca
gttatgaattttattagaagtgacttgtatatgactattacacaagctgacaaagtttat
agagagttaccatttgtcgtaaatcaagcgcgtgtagatgaaatgcctgaatcagatgaa
gatgtgtcaattattcaaggtatgattgatttaatatttttaaaagacgatcaatattac
tttgtagattacaaaacagatgcatttaataagcgtagaggtatgacagatgaagaggta
ggcatacaacttcgtgataagtataaaattcaaatgaaatattataaaaacacattagaa
acgattttaaattctaaagtatacggttacctttatttcttccaatttggtcaaatgagt
attgaagaagatgtttaa
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