Strigops habroptila (Kakapo): 115600623
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Entry
115600623 CDS
T08851
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shab04515
]
115600623
Cell adhesion molecules [BR:
shab04515
]
Cadherins
Cadherin related
115600623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
Cadherin_CELSR2_9th
CADH_Y-type_LIR
EGF
Cadherin_2
Cadherin_pro
hEGF
Laminin_G_3
EGF_2
cEGF
Motif
Other DBs
NCBI-GeneID:
115600623
NCBI-ProteinID:
XP_030325653
LinkDB
All DBs
Position
Z:12805492..12860899
Genome browser
AA seq
2873 aa
AA seq
DB search
MVPRGAPRAAGCLLLCCALAAARAAPRRRPSFDGHVAENRAAGTRVRGLSIPLTRLAPGP
WCAQVRGRRWRLQLLGEGHSHFRVWLHARTARVLLRTARPLDREARALYALRLALCCRRC
LPRAAAPAELAAIAVRVLDDNDNAPRFAGGPRRGVTRLRVEETLALGSAVWQARAEDADA
GANAELRYFALPRSEHFFVVPRSGRVLLVRSLLHLRAPRPLRLYARDRGRPPLLSAPLEL
EVLPQAKRLPAPRGAALRRRRSVRLPPSPAAARPLSLSVPEDARPGSRLATLGPARFSCA
WFELVSPPVEESPVRVERESGAVTLAAGLDRDAVAHWKLVVRVQERTGKDWYLVHLSLTV
TDVNDNVPNWAMEPFPFLAVVSPEAAGDTEVYKLLALDADEGIHGAVEYFLLEGGEDRFE
VEKDTGWIKTTGLPLVKDKEYLLTVLAADKLGSRGSPASVSVIAGFRPPQFTNISYFVYV
PESTPQGKSFLTVTAVSYQKKSLSYSLLTNPSGLFSIDQATGDISLTQSVDYESGQHHYL
LLVRGQENEQFSSAAEVLVVITDVNDCAPEFHQSIYSKVDVPETVTMTTALLQVTATDCD
SKENAELLYSALSQDFSITSHGTVFPATRLDYERPGHLYEFIIMAVDKGEEPKTGTATVR
IHVSNVNDEAPEFSQTIYRSFVSEDAGPNTLIATVNAIDPDGGGVTYDILSGNQKGNFVI
DTKKGLVRLRSSLFPKLQGTEYVLNVIATDDNASGGPHSLTSTAQVVVKIDDVNTNKPVF
QKCQYYQEHASVLENQPSGTVVLQVEATDADKGANGLVKYGLVQRGGVLPAFSIHPDTGV
LTTVQVFDREKQREYPITVTATDQAAEPLIGICQINVIILDQNDNDPRFENTHYEYFLRE
DTRVGTSFLRVAAHDDDYSSSAAITYLIANEESNYLQINPTTGWVFVNQPISQKSSIIRE
IIATDGGNRSSKVDLAVTIISAKNQPPQWERGSYEVVIPENTTQDASILTIKATSAVGDP
RVTYNLEEGLVPETNMPVRFYLTPNRHDGSASILVAEPLDYETTKNFLLRVRAQTVTAVP
LAAFTMVYISVTDVNDNVPFFTSPVYEASVTEGAGVGTFVIQVSAIDLDLGQNGEVTYSM
LHDSSRDYTYFRLDSQTGSIYTASLFDREKKVSYLLEVKSVDGCESARPGKHGKPNSDTA
YVHIFIIDVNDNKPVFPQSVYEVNVDEDQDVGSAIITVSASDEDEGTNAKLRYQITAGNT
EGVLGVESETGAIFIAQPLDYEETKMYEICMLASDGKWEDYAVIIINVMNKNDEIPVFFI
NEYYGSVIEERDGLPVFVLQVMANDPDSDVDEGDLRYSLHGHGAAETFTIDERTGSIYSN
KMLDREERALWRFVVLATDEGGGGLTGFADVIINVWDINDNAPMFSCMPDDCNGSVFENS
PADTLVMEMRAVDRDDPNVGLNAILTYRITENVRNEFGADIFSINPDTGTIHVAGGMLDR
ERTENYFLTVEARDGGELTGTGTATVWIVDINDHVPKFTKKVWQAIIPENSAIDSEVLQV
CATDADVGENANLIFSIIRGDPDQKFYIGKDEQWQCAAIRLKKKLDFENAHERQFNLTIA
VEDLDFSSIAVCLIEVEDSNDHSPVFLSQFIQTSPFFENMPVGTTVSTVRATDEDSGLNG
NIIYSIESDSDPMRQFAVDQYGHVVVANTLDREVIQKYSLVVQASDQGTPACTGSVTVLV
NLLDVNDNGPRFEAPYMPVVWENILRPETVSMNHTSKLLHAFDPDGEENGPPFMFSLPPD
YQSSLDFSLTDNRNNTATVTALRSFDREKQKMFHLPIVITDSGIPAMSSTSTLTITIGDE
NDNCHESGHKEVYVYSYEGKWSTAVLGEVFAPDQDDWDNKTFLSEGKMLKSFRLNQKTGS
LMMVDNTPQGIYNLKVRVSDGVCPDVISTVQIHVEELENEAIQNSATVHLSDVTAEEFIR
RDEHGKTRHTKFKELLAKMLFTKSSDVMVFSVMNIVGKQIDVRFAVRDGSAYYRPEKLHA
EMAAFKNEIQSALQLNISQIDVDECRSANCSEGSGCTSYLAVSDIPTVVDTGSVSFVSVT
ATTNAVCTCSARDQVHHSCSSYPRSPCLNGGMCIDTLNGYRCLCPASFHGPDCQQTKHSF
HGNGYAWFRPIRPCFESSLSLEFITVVPDGLLLYSGPLSNPEPGSTENFIAIELYSGIPV
LKMSHESGFLVLQFPSHLNVADKKWHQLEVRTSGQNVRFILDHCSAAVVSEIEGVGKCLS
TEDRTNCEVLGSVPGRARYLNVNHVLQLGGVKESLPYSYPQLLHKHFSGCLRNFILDTQV
YDLQSPAESLNSFPGCTLTDGSCETMGSSLCGIHGRCLGDWGSFSCHCLPGYYGYRCDKV
ANEYTFGPGSHIRYQLPVSVPARRMLFEAMIRTRQPDGVITSMLSRNKDEHITLQVVQGL
LVVSYNLGDGDYSVSLPSYHIDNGEWHHIALERNENEFTLRLYEGGGKREIWKAAGIYKE
IVIDPSSLVLGNTHPFSQNRSFQGCMKDVRFNNYRIPLDTHMKELVSVLSAQGVKEGCSS
EACRNNPCNQEFICIDLWMMHECSCPPGHMIMENATGRQCVHTACAKRPCNYGTCISQSP
TEFQCRCPDGYTGRNCEIILAIFHKDTGLSFRSMFAICICFLALLALLSAGFLWAHWKTH
KGQKGGVYHVSAQHEDLEDTRENSLNYNEEGGGEHDVAAYNMAELQASIQTSAAYSLCKK
KQPARLSRLLSGTSPGTQEQTRPPVTAGASCTSADFGQYLSDAVRGADCHPQAVPQDSLR
VFCMEGEGLVGSSLSTLSSSGLEEDIVCDDIEEWGPKFLKLSELYLHTDAEEL
NT seq
8622 nt
NT seq
+upstream
nt +downstream
nt
atggtgccccgcggagcgcctcgcgccgccggctgcctgctgctgtgctgcgccctggcc
gccgcccgcgccgcgccgcggaggagaccctcgttcgacgggcacgtcgcggagaaccgc
gcggcgggcacgcgcgtgcgcgggctgagcatccccctgacgcggctggcgccggggccg
tggtgcgcgcaggtgcggggccggcgttggcggctgcagctgctgggcgaggggcactcg
cacttccgcgtgtggctgcacgcccgcacagcgcgcgtcctgctgcgcaccgcccgcccg
ctggaccgcgaggcgcgcgcgctctacgcgctgcgcctggcgctgtgctgccggcgctgc
ctgccgcgcgccgccgcgcccgcggagttggccgccatcgccgtccgcgtgctggacgac
aacgacaacgcgccgcgcttcgcggggggcccgcgccgcggcgtcacgcggctccgcgtg
gaggagacgctcgcgctcggctccgccgtgtggcaggcgcgcgccgaggacgcggacgcg
ggcgccaacgcggagctgcgctacttcgcgctcccgcgcagcgagcacttcttcgtggtg
ccgcgcagcgggcgcgtgctgctggtgcgctccctgctccacctgcgcgctccccgcccg
ctgcgcctctacgcgcgggaccgcgggcggccgcccctgctcagcgccccgctggagctc
gaggtgctgccgcaggccaagcgcctcccggcgcctcgcggtgccgccctacgccgccgc
cggtccgtgcggctgccgccgtcccccgccgcggcccggccgctgtccctgtcagtgccc
gaggacgcccgcccgggcagccgcctggcgacgctgggcccggcgcgcttctcctgcgcc
tggttcgagctggtgtccccgcccgtcgaggagtcgccggtgcgtgtggagcgggagagc
ggcgcggtgacgctagccgcgggcctcgacagggatgcggtggcgcactggaagctcgtc
gtgcgcgtccaggagcgcacagggaaggattggtacttggtgcacttgtcacttactgtg
acagacgtgaatgacaatgtacccaactgggccatggagccgttcccgttcctggctgtg
gtttcccccgaagctgcaggagatactgaagtatacaagctgcttgctctggatgcagat
gaagggatccatggagcagtagaatattttctcttggaaggtggtgaagacagatttgaa
gttgagaaggacactggctggattaaaacaacgggtttgccactggtgaaagacaaggag
tatttactgaccgtactagcagcagataaacttggaagcagagggtctccagcctctgtt
tctgtaattgctggatttcggcctccacagttcaccaacatatcatactttgtttatgtt
cctgaaagtacgccacaaggaaaatcctttcttacagttactgctgtatcatatcaaaag
aaatccctgagctacagtttattgactaaccccagtggtctgttcagcattgatcaggca
acaggagatatcagtttaactcagagtgtggattatgagagtggccaacaccactatctt
cttttggtcagaggacaggaaaatgagcagttcagcagtgcagcagaggttttggttgta
atcacagatgtgaatgattgtgcccctgaatttcatcagtcaatttacagcaaggttgat
gttcctgaaacagttactatgacaactgcacttctacaagtgacagccactgactgtgat
tcaaaagagaatgccgaattgctgtattctgctttgagtcaagacttcagcattacttct
catggtactgtttttccagcaacacggttggactatgagcgacctggccacctgtatgag
tttataattatggctgtagataaaggagaagagccgaagactgggacagcaactgttagg
atccatgtttcaaatgtgaatgacgaagcacctgagttttcccagacaatctacaggagt
tttgtttctgaagatgcaggcccaaacacactgattgctacagttaatgccattgaccct
gatggaggtggtgtgacatacgatattctgtctgggaatcaaaaaggaaactttgttatt
gacactaagaaagggctagttagacttcgttcaagtctgtttcctaagctgcagggaaca
gaatatgtacttaatgtcatagctactgatgataatgcctctggaggaccccattctctt
acaagtactgcccaggttgttgtgaaaattgatgatgtcaacactaacaaacctgtcttt
cagaagtgtcagtattatcaggaacatgcttcagtactggagaaccagccttcagggaca
gttgtactgcaggttgaagctactgatgctgacaaaggagccaatggtctggtgaaatat
ggcttggtgcagagaggtggtgtcctgccagcatttagtattcatcctgacacaggtgta
ctgacaactgttcaggtatttgatcgagaaaagcagagggaatatcctatcactgtcaca
gcaacagatcaggcggcggaaccgctcattggaatatgtcagataaatgttatcatcttg
gaccaaaatgacaacgaccccagatttgaaaacactcattacgaatatttcctaagagag
gacacaagagttgggaccagctttcttcgtgttgcagcccatgatgatgactacagctcc
agtgctgccattacatatttgatagcaaatgaagaatcaaattatttacagattaatcct
actacaggctgggtgtttgtgaaccaacccatatctcagaagtcatctataattcgagag
attattgctacagatggaggtaataggagtagtaaagttgaccttgcagtaactattatc
agtgcaaaaaaccagcctccgcagtgggaaagaggcagctatgaagttgttattccagag
aacacgacacaagatgcatcaattttgacaatcaaagcaacttctgccgttggtgatccc
cgtgtgacttataacttagaagaaggacttgttccagagaccaacatgccggttcgtttc
tacctgactccaaacagacatgatggttctgcttcaatcctggtagctgagcccctagac
tatgaaacaacaaagaactttctgctgagagttcgagcacagactgttactgcagttcct
ctggcagcattcactatggtctatattagtgtaacagatgtcaatgacaatgtcccattc
tttacttcacctgtttatgaagcctcagtaacagaaggagctggtgttgggacatttgtc
attcaggtgtctgccatcgaccttgaccttggtcagaatggtgaggtaacttactccatg
ttacatgacagtagcagagactacacatattttcgcttggactcacagacaggctcaata
tacactgcctcattgtttgatagagagaagaaggtgtcctatcttctagaagtcaagtca
gtagatggctgtgagtcagctcgacctggaaaacatgggaagccaaactctgacactgcc
tacgtacacatttttatcattgatgtgaatgataacaagcctgtgttccctcagagtgtc
tatgaagtaaatgtggatgaagaccaggatgtgggctcagctatcattacagtcagtgct
agtgatgaagatgaaggaacaaatgctaaattacggtatcagatcacagctgggaacaca
gaaggagtccttggtgtcgaatcagaaacaggagccatttttattgcccaaccactggat
tatgaagaaacgaaaatgtatgagatttgcatgttggcctctgatgggaaatgggaagac
tatgcagttatcatcatcaatgtcatgaataaaaatgatgagattccagttttctttatc
aacgaatactatggaagtgtgattgaggaacgggatggattaccagtctttgtacttcag
gttatggcaaatgatcctgatagtgatgtggatgaaggagatttgagatactcattgcat
gggcatggtgcagctgagactttcacaatagatgagagaacaggcagcatttactccaac
aagatgctggatcgggaagagagagcactgtggagatttgttgtattggctacggatgaa
ggtggaggaggacttacgggatttgctgatgtaattattaacgtgtgggatataaatgac
aatgcgcccatgttctcatgcatgcctgatgattgcaatggcagtgtctttgaaaattct
cctgcagacacgttagtcatggaaatgcgtgctgttgatcgtgatgatccaaatgtaggt
cttaatgctatcctgacctacaggataacagagaatgtaagaaatgagtttggtgctgac
atatttagtatcaacccagatactggtacaatccatgtagcagggggaatgctagacaga
gaaaggactgaaaattattttcttactgttgaagcaagagatgggggagagctaacagga
acaggcactgccactgtctggattgtagacatcaatgatcatgtacctaaattcacaaaa
aaggtgtggcaggcaataatacctgaaaacagtgccattgactcagaagtgctgcaggtg
tgtgctacagatgcagatgttggggaaaatgccaacttaatattcagtatcatcagggga
gacccagatcagaagttttatattgggaaagacgaacaatggcaatgtgccgctattcga
ctgaaaaaaaagttggattttgagaatgcacatgaaaggcagtttaatcttactattgca
gtggaagatcttgatttttctagtattgcagtgtgcctgattgaagttgaagactctaat
gaccacagcccagttttcctttcccagtttattcagacaagccctttctttgaaaacatg
cctgtaggtactacagtaagcacagtgagagctacagacgaggattctggtttgaatggg
aacattatatattctatagagtcagattcggatcctatgagacagtttgcggttgaccaa
tatggtcatgtggttgtggcaaatacactagatcgtgaagtcattcagaaatacagttta
gttgtacaagcttcagatcaagggacacctgcctgcactggaagtgttacagttctggtt
aacttgcttgatgttaatgacaatggaccacggtttgaggcaccatatatgcctgtagtt
tgggaaaatatattgaggcctgaaacagtgtcaatgaaccatacatcaaaactgctgcat
gcgtttgatccggacggtgaggaaaatgggccaccattcatgttttcattgccaccagat
tatcagagttctctggatttttctcttactgacaacagaaataacacagcaacggtaact
gcgttgaggtcctttgacagagaaaagcagaaaatgtttcatctgccaatagttataaca
gatagtgggattccagctatgagctctacaagcaccctaactataacaattggtgatgaa
aatgacaactgccatgaatctggccataaggaagtctatgtgtacagttacgaaggaaaa
tggtcaacagcagtgcttggggaagtgtttgcaccagatcaagatgactgggacaataaa
acatttctctctgaaggaaaaatgctgaagtctttcagattaaatcagaagactggttct
ttgatgatggtggataacactcctcaaggaatatacaacttaaaagtgagagtttctgat
ggagtttgtcctgatgttatatctacagtacaaatccatgtcgaagagctggaaaatgaa
gccatacaaaactcagccactgtgcatctatcagatgtcacagcagaggagttcataagg
agagatgaacacggcaaaacgagacataccaagttcaaggaattactagcaaagatgtta
ttcactaagtccagtgatgtcatggtcttcagtgtgatgaacattgttggaaaacagata
gatgtaagatttgcagtccgtgatggctcagcatattacagacctgagaaactgcatgcg
gagatggcagcatttaaaaatgagatccagtcagctttacaactgaacatttcacagatc
gatgtagatgaatgcaggagtgcaaactgcagcgagggcagtggctgcacaagctacctc
gctgtgagtgacatcccgacagtggtggatacgggaagtgtgtcgtttgtgtcagtaaca
gccaccaccaatgcagtctgcacctgctcagctcgggaccaagttcatcactcctgttcc
tcctaccctcgaagcccttgtctcaatggtggcatgtgtatcgacactttgaatggttac
agatgtctttgtcctgcttcatttcacggaccagactgccaacagacaaagcacagtttc
catggaaatggttatgcatggtttcgtcccatcaggccttgttttgaaagctcactctct
ctcgagtttattactgtggttccagatggacttttactgtatagtggtcctttatcaaat
ccagaacctgggagtacagaaaacttcattgcaatagaactctacagtggcattcctgtg
ctgaagatgagccatgaatcgggttttctggtgctgcagtttccaagtcacctgaacgta
gcagacaaaaagtggcatcaactagaagtcagaaccagtggtcagaatgttcgattcatt
ttggatcactgcagtgcagctgttgtttcggagattgaaggagtaggcaaatgcctgtcc
actgaagatcgtacaaactgtgaagtcttagggtctgttccaggaagagcaaggtatttg
aatgtgaaccacgttctacagctgggtggtgtaaaagaatcattaccatattcctaccca
cagctgctacacaaacacttttctggttgtttgcgcaatttcatcttggatactcaggta
tatgaccttcagtctcctgcagagtccctgaatagcttccctggctgcacacttacagat
gggagctgtgagactatggggtcttctttgtgtggtattcatgggaggtgtcttggagac
tggggctcattttcttgtcactgtttgccgggttactacggctatcgatgtgataaagtt
gccaatgaatatacatttgggccaggaagtcacattcgctatcagcttcccgtcagtgtg
cctgcccggaggatgctgtttgaagccatgattaggacacggcagcctgacggtgtcatc
acaagcatgttgtctcgaaataaggatgaacacatcaccctgcaggttgttcagggatta
ttagtggtctcgtataatctgggtgatggagactattctgtaagccttccctcgtaccac
attgataatggtgaatggcatcatatcgcactggagagaaatgaaaatgaatttacgctt
cgcctttatgaaggaggcggaaagagagaaatttggaaagcagcaggaatatacaaagag
attgtgattgatcccagcagcttggtccttggaaacacccacccattcagtcaaaacagg
agttttcaaggatgtatgaaggatgtcagatttaataactacagaatccctctggacact
cacatgaaggagctggtgtcagtattaagtgcccaaggtgtcaaagaaggatgttcttca
gaggcttgtaggaataacccttgtaaccaggaatttatttgtattgatttgtggatgatg
catgaatgcagttgccctccaggacatatgatcatggagaatgccacgggtagacaatgt
gtccacactgcgtgtgctaaaaggccctgtaactatggcacctgcatctcacagtcacca
actgagttccagtgccgctgccctgatggctatactggacgtaactgtgaaatcatacta
gccatctttcacaaagatacaggcctcagctttagatccatgtttgccatctgcatttgc
tttttggcgctgttagctctgctcagtgctggattcttgtgggctcactggaagactcac
aagggtcagaagggaggagtttaccatgtatctgcccagcatgaggatctggaggacacc
agagaaaatagcctcaactacaatgaagaagggggcggagagcacgatgtggctgcatac
aacatggcagagctgcaggcgtctattcaaaccagcgctgcctattccctctgcaagaag
aaacaaccagcaagactgagccgtctcctcagtggcacatccccaggcacgcaggagcag
accagacccccggtgactgcaggagcttcctgcactagcgcagacttcggtcagtacttg
tcagacgctgtccgaggtgctgactgtcatccccaggcagtaccacaagactcgctgcgg
gtgttctgcatggaaggagaaggcttggtgggcagcagcctgagcaccctgagctcctct
ggactggaggaggacattgtgtgtgatgatattgaagagtggggaccgaagtttctcaaa
ctaagtgaactgtacttgcacacagatgcagaagagctgtag
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integrated database retrieval system