Strigops habroptila (Kakapo): 115600763
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Entry
115600763 CDS
T08851
Symbol
TNPO1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115600763 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115600763 (TNPO1)
03009 Ribosome biogenesis [BR:
shab03009
]
115600763 (TNPO1)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115600763 (TNPO1)
Ribosome biogenesis [BR:
shab03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
115600763 (TNPO1)
Pre-60S particles
115600763 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_2
Arm
IBN_N
TOR1L1_N
Vac14_Fab1_bd
HEAT_EF3_N
Cnd1
PDS5
Adaptin_N
CEP104-like_TOG
MMS19_C
INTS7_N
Dopey_N
UNC45-central
RTP1_C1
TPR_TTI1_C
HEAT_DAAF5
DUF3689
Motif
Other DBs
NCBI-GeneID:
115600763
NCBI-ProteinID:
XP_030325948
LinkDB
All DBs
Position
Z:74814617..74885568
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AA seq
890 aa
AA seq
DB search
MEYEWKPDEQGLQQILQLLKESQSPDTTTQRAVQQKLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHFHNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFL
QFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVRKNVCRALV
MLLEVRMDRLLPHMISIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLCRHLTKL
IPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRFHRSRTVAQQHEEDGIEDDDDD
DDELDDDDTISDWNLRKCSAAALDVLANVFRDELLPHILPLLKELLFHPEWVVKESGILV
LGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKP
LMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLAQAMLHNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIE
QLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPE
FISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGY
VCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVVQDFIFFCDAVA
SWISPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAYYGV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgagtggaagcctgacgagcaggggctccagcagatcctgcagctgctcaag
gagtcccagtccccggacaccaccacgcagagagcagtgcaacaaaaactagaacaactc
aatcagtatccagatttcaacaactacctgatttttgttcttacaaagttgaagtctgaa
gatgaaccaacacgttccttgagtggtctcatcttgaagaataatgtaaaagcacatttt
cacaactttcccaacggggtaactgacttcattaaaagtgaatgtctgaacaacattggt
gattcctcccccttaattagagctactgtaggcattctgataacaaccattgcctcaaaa
ggggaattacagaattggcctgaactcttaccaaagctttgcagtctgttggattctgaa
gattacaatacctgtgagggtgcttttggcgctcttcagaagatatgtgaagattctgct
gaaattttagatagtgatgtattggaccgaccactcaatatcatgataccgaagttcttg
cagttcttcaagcacagcagtccaaaaataaggtctcatgctgttgcatgtgtcaatcaa
tttatcatcagcagaactcaagctcttatgttgcacatagattcttttattgagaatctt
tttgcactggctggcgatgaggagcctgaagtacgcaaaaatgtttgccgtgctctcgta
atgttgctggaagttcgaatggatcgcctgcttcctcatatgattagtatagttgagtac
atgcttcaaaggacccaggaccaagatgaaaatgtggctttggaggcttgtgagttttgg
ctgactttggctgaacagccaatttgtaaagatgtattatgtcggcatcttacgaagctg
atacctgtgctggtaaatggtatgaaatattcagagattgatattattttgttgaagggg
gatgttgaagaagacgaagctattccagatagtgaacaggacatacgacctcgttttcat
cgttcacgaacagtggctcagcaacatgaagaagatggtattgaagatgatgacgatgat
gacgatgaacttgatgatgatgatactatttctgactggaatttaaggaaatgttctgct
gctgctctagatgtcctggccaatgtatttcgtgatgaacttctgccacacatcttgccc
cttttgaaggaattgctcttccatcctgaatgggtagttaaagaatctggtatccttgtt
cttggagcaattgctgaaggctgcatgcagggtatgattccatatcttccagagctgatc
cctcaccttattcagtgcctctccgacaaaaaggctcttgtgcgctccattacatgctgg
actcttagtcgctatgcacactgggtagttagtcaacccccggacacatacttgaagcca
ttaatgactgagttgctaaagcgtatcctggatagcaacaagagagtacaagaagctgcc
tgcagtgcctttgctactctagaagaggaggcttgtacagagcttgttccttatcttgca
tatatacttgacactttggtcttcgcatttagtaaataccagcataaaaacctgctcatt
ctttatgatgctataggaactctagcagattctgtaggacatcatctaaataaaccagaa
tatattcagatgctaatgcctccattaatccagaagtggaacatgctgaaggatgaggat
aaagatctcttccctttattagagtgcctgtcgtcagttgctactgccttgcaatctggc
tttcttccatactgtgaacctgtgtaccagcgttgtgtaaatctggtgcagaagacactt
gcacaagccatgttgcataatgctcagccagaccaatatgaggctccagataaagatttc
atgattgtggctcttgatttactcagtggtttagctgaaggacttggaggcaacattgaa
cagctagtggctcgtagcaatatcctgacactaatgtaccaatgcatgcaggataaaatg
cccgaggtacggcagagttcttttgcgttgttaggtgatctgacaaaggcgtgttttcag
catgttaagccttgcattgctgatttcatgccaattttgggaaccaacctaaaccctgaa
ttcatttctgtgtgtaacaatgccacctgggcaattggagaaatctccatacagatgggt
atagagatgcagccttatattccaatggtgttgcaccagcttgtagaaataattaacaga
cccaacacaccaaagacgttgttagagaacacagcaataacaattggtcgtcttggttac
gtttgtcctcaagaggtggcccccatgctacagcagtttataagaccctggtgcacctct
ctgcgaaacataagagacaatgaggaaaaggattcagcattccgtgggatatgtaccatg
atctctgtcaaccccagtggagtagtccaagactttatttttttttgtgatgctgttgca
tcgtggattagcccaaaagatgatctccgagacatgttctgtaagattcttcatggattt
aaaaatcaagttggggatgagaattggaggcgtttctctgaccagtttcctcttccctta
aaagagcgccttgcagcttactatggagtttaa
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