Strigops habroptila (Kakapo): 115601086
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Entry
115601086 CDS
T08851
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab02010
ABC transporters
shab04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115601086 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115601086 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shab02000
]
115601086 (ABCA1)
Transporters [BR:
shab02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115601086 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
115601086
NCBI-ProteinID:
XP_030326465
LinkDB
All DBs
Position
Z:complement(51450298..51544826)
Genome browser
AA seq
2261 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDAKRLLLYSQQDT
SIRDVQKVLGKLRKLGNSSGTDLKLRDFLIDNETFSDFLHHNVSMPSSAVQDLLDADVNL
QQVFLSGYRMQVQDLCNRSALSEFLTIQNQMVAMDSEAYICTLPKEKLHAAEQAFRANLS
PLKPLQRLSFNSSLWDLSETVEALRASLRKLVKELLSMKSWSDMRQEVMFLTNVNASNSS
TQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEDDVTNFYDNSTTPYCNE
LMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAVRKVMTEVNRTFQELGVFRDLGGMWE
EISPKIWTFMESSQEMDLVRTLLKSKALWDLHMPSSNWTVEDVARFLSNQPEDFETANGS
VYTWVDAFNETDRAIQTISRFMECVNLDKLEPVATEVRLINKSLELLDERRFWAGVVFTE
IAPNSTELPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVQTGTEKTTGVYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAGLLVLILKMGNLLPYSDPSVVFV
FLSIFGIVTILQCFLISTMFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVSFSLKIFAS
LLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMMFDTFLYGVMTW
YIESVFPGQYGIPRPWYFPFTKSYWFGEKPQDREHRYPDQKGPSEVCKEEEPTHLSLGVS
IQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFIL
GKDIRSELSNIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEVEQMAVDVS
LPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQG
RTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSS
CRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVAEARLVEDIG
HELTYVLPYKAAKEGAFVELFHEIDDRLADLGISSYGISETTLEEIFLKVADDSGVDAET
SDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQMK
GWKLTQQQFMALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQ
PWMYDEQYTFISNDAPEDPSTQRLLDALLNKPGFGTRCMQGHSIPDTPCTVGQTEWTTAS
VPDSVLNIFLKGNWSMENPSPSCECSNEKIKKMLPVCPPGAGGLPPPQREQDTTDILQNL
TGRNISDYLVKTYVQIIGKSLKNKVWVNEFRYGGFSLGASSSLMLPPSLEVTDAIKQVKK
ILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLEQ
GKNPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVLAL
LLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINSSVATFVLELFTNNKLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTKI
YRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILSN
IQEVHQNMGYCPQFDAVNELLTGREHLEFYALLRGVPEKEVCKVGEWAIRKLGLVKYGEK
YAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFFG
HAFPGSVLKEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHTKDLSLHKSQTVVDIAILNSFLQDEKVKESCV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctgggattgctgctatggaagaacttcacctacagaagacga
cagactttccagctgctgattgaggttgcctggcctctgtttatcttcttcatcttgatc
tctgtaagactttcatatccgccctacgagcagcatgaatgtcacttcccaaacaaagcc
atgccttcagcaggaaccttgccatggatacaggggatcatctgcaatgccaacaaccct
tgcttccgctacccgactcctggggaatcccctggtatcgttgggaacttcaatgcctcc
attgtttcccgcctgttctcagatgccaagaggttacttttgtacagccaacaggatacg
agcatacgggatgtccagaaggtcctgggaaaattgcgcaagttgggaaattcctctggc
acagacttgaaacttcgggatttcctgattgacaatgagacattctcagacttcctccat
cataatgtgtccatgccatcatctgcagtgcaggatctactggatgcagatgtcaatctc
cagcaggtctttttatccggttaccgaatgcaagtgcaagatctctgcaatagatcagca
ctgtctgaatttcttacaatccaaaatcagatggtggccatggactctgaagcctacatt
tgtaccttgccaaaggaaaaactccatgcagccgaacaagccttccgtgctaacctgagt
cctttgaagccccttcagagactttcttttaattcatcattgtgggacctgtcagaaaca
gtggaagctctgagagccagccttcggaagcttgttaaagagttgctgagcatgaagagc
tggagtgacatgaggcaagaggtgatgtttctgaccaatgtgaatgcctcaaactcctct
acgcagatctaccaggctgtgtcacgaattgtgtgcggccatcccgaaggtggagggctc
aaaattaaatctcttaactggtatgaagataacaattacaaagcgctgtttggaggcaac
ggcactgaagatgatgtaactaacttctatgataactccacaacaccttactgcaatgaa
ctgatgaagaacctggaatccagcccgctttccaggattatctggagggctttgaaaccg
ttgctgattgggaagatcttgtacactccagacacaccagctgtaaggaaggtcatgact
gaggtgaacaggacattccaggagctgggtgtgtttcgtgacctcggggggatgtgggag
gagataagcccgaagatttggacgtttatggaaagtagtcaggaaatggatctcgttcgg
acattgctgaagagcaaagctctctgggacctgcacatgccgtcttccaactggacagtg
gaggatgttgctcggttcctgtcaaaccaacctgaggactttgagacagcaaatggctca
gtgtatacctgggtggacgccttcaatgagacagaccgggctatccagaccatctcccgc
ttcatggagtgtgttaacttggacaaactggagcctgtggccacagaagtccggcttata
aacaagtccttggagcttctggatgaaaggaggttctgggctggtgtagtcttcactgag
atcgctcctaacagcacagagctccctcaacatgtgaaatacaagatacgcatggatatc
gataatgtggaaaggaccaacaagatcaaggatgggtactgggatcctggtccccgtgct
gacccctttgaggacatgcgctatgtttggggaggctttgcctacctgcaggatgtagtg
gaacaggccatcattagggtgcagacaggcacggagaagacaacaggcgtttatatgcag
cagatgccctacccttgttatgtcgatgacatatttctgcgtgtcatgagccgctccatg
cctctcttcatgactttagcctggatctactcagtagctgtgataattaagggcattgtg
tatgagaaggaagcccggctgaaggagacaatgaggattatgggacttgacaacggtatc
ctttggctaagctggttcattagcagcctcatccctctcctgatgagtgcaggcctgctg
gtgctgatccttaagatggggaatctgctgccgtacagcgacccgagtgtagtctttgtt
ttcctctcgatctttggcattgtgaccattctgcagtgcttcctcatcagcaccatgttt
tccagggccaacctggcagctgcctgtggtggcattatctatttcacactatacctgcct
tatgtgctgtgcgttgcctggcaggactatgtcagcttctcactcaagatatttgcgagc
ctgctgtctccagtggcctttggctttggttgtgaatactttgcactgtttgaagagcag
ggagttggtgttcagtgggacaacttctttgagagcccactggaagaagatggctttagc
atcaccacatctgctgtcatgatgatgtttgacaccttcctatatggtgtcatgacctgg
tacattgaatctgtcttcccaggccagtatgggattcccaggccctggtactttcctttc
acaaagtcgtattggtttggtgagaaaccacaggacagggagcaccgttatcctgaccag
aaggggccttcggaagtctgcaaggaggaagagcctacacatctaagccttggtgtttcc
atccagaacctggtcaaggtttatcgtgatggcaagaaagttgctgtagatggtctcaca
ctgaacttctatgaaggacaaattacctcctttctaggacataatggagcagggaaaacc
actaccatgtccatcttgactggcttgttccccccaacatcgggtacagccttcatcctg
ggcaaagatatccgctctgagctcagcaacatcaggcagaacctgggtgtctgtccacaa
cacaatgtgctgtttgacttgctgactgtggaggagcacatctggttctatgcacggctc
aaaggactgccggaaaagaaagtgaaagaggaggtggagcagatggcagtggatgtcagt
ttgcctcacaaactgaaagctaggacaagcaaactctcaggtggcatgcagaggaagctc
tcagttgccttagcctttgttggtggctccaaggttgtcattctggatgagcctacagct
ggggtggatccttattctcgcagagggatatgggaattgctcctgaagtatcggcaaggt
cgcactatcattctctccacacaccacatggatgaggcagacattctgggggaccggatt
gccatcatttctcatggcaagctctgctgtgttggatcttctctcttcctgaagaaccaa
ctaggaacaggctattatttgaccctggtcaagaaggatgtggactcctctctgagctcc
tgcagaaacagcagcagcacagtgtcctatctgaagaaggatgacagtgtttcccagagc
agctctgatgctggccttggcagtgaccatgaaagtgacacactgacaatagatgtctct
gcaatttcaaatctcattacaaagcatgttgctgaggccaggctggtagaggacatcggc
catgaattaacctatgtcttgccgtacaaggctgctaaagagggagcttttgtggaactg
ttccatgaaattgatgaccgtcttgctgatcttggcatttccagctacggcatctctgaa
accactctggaggagatctttctgaaagtggctgatgatagtggcgtggatgcagaaacc
tcagatgggacattgccagccagaaggaacaggcgtgtgtttggagacagacagagctgc
cttcgtccatttacagaagatgatgcatttgatcctaatgattcagacatagatccagca
gaatccagagagacagaccttctcagtggcatggatgggaaaggatcctaccagatgaaa
ggctggaagctcacccagcagcagttcatggctctgttgtggaagaggctgcttattgcc
aagagaagccggaagggcttctttgctcagatcgtgctgcctgctgtctttgtgtgtatt
gctctcatgttcagcctgattgttcctccctttggaaagtatcccagcctggaattacaa
ccctggatgtatgatgagcagtacacttttattagcaatgatgctccagaagatccaagc
actcagaggcttttggatgcccttctcaataaacctggctttggtacacgctgtatgcag
ggacactccatcccagacactccttgtactgtggggcagacagaatggaccactgcttca
gtcccagactcagtcctgaacatcttcttgaaaggcaactggagcatggagaacccttcc
ccatcttgtgagtgcagcaatgagaagatcaagaaaatgctgcctgtgtgtccccctggt
gcaggcgggctgccaccaccacagcgcgagcaagatactactgacatcctccagaatctg
acaggtcgcaatatatcagactacctagtgaagacctacgtgcagatcattgggaaaagc
ttaaaaaataaggtctgggtgaatgagttcaggtatggtggcttttccttgggagccagc
agttccctcatgcttcctccaagccttgaagtcactgatgccattaaacaagtgaagaaa
atcttggagctagcacaggggagttctggagatcggtttctcaacagcttgtcaagtttc
atgaaaggcctggatacaaagaacaatgtgaaggtgtggttcaataacaagggctggcat
gccattgcctccttcttgaatgtgatcaacaatgccatccttcgggctaacctggagcag
ggaaaaaatcctagtgcttacgggatcactgccttcaatcatccactcaacctcaccaag
caacagctctctgaagtggccctgatgaccacctcagtggatgtcctagtctctatctgt
gtgatctttgccatgtcctttgttcctgccagctttgtggttttccttatccaggaacgt
gtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcctgtgatctactggctg
gccaactttgtctgggatatgtgcaactacattgttccagccacgctagtcatcatcatc
ttcatctgcttccagcagaagtcctatgtatcctcctccaatttgcctgtgctggctctc
cttctgtttctctatgggtggtccatcacccctctgatgtatccagcctccttcgtgttc
aaaatccccagcacagcatatgttgtgctgaccagtgtgaacctcttcattggcatcaat
agtagtgtggccacctttgtcttggagctcttcaccaacaacaagctgaacaatatcaat
gacatcctgaagtctgttttcctcatcttcccccacttctgcctgggacggggactcatt
gacatggtgaaaaaccaggctatggctgatgctctggagaggtttggagaaaatcgtttt
gtgtctcctctgtcatgggacctggtgggaaggaacctctttgccatggcagtagagggc
gttgtcttcttcctcatcacagtgctcatccagtacaggttcttcatcaggcccaggcct
gtctatgccaagctgcctcctgtgaatgatgaagatgaagatgtaaccagagaaagacag
aggataattagcggaggaggacagagtgacatcttggaaatcaaggagctaaccaagatt
tacagaatgaagcgaaagccagctgtggataggatctgtgttggaataccccctggtgag
tgctttggactcctgggagtaaacggtgctggcaagtcatctacttttaagatgctaact
ggtgatacagatgtgacaggaggagaagctttcctcaaaggaaacagtatcttgtccaac
atccaagaagtccatcagaacatgggctactgcccacagttcgatgctgttaatgagctg
ctgacagggcgagagcacttggagttctacgcactcctgagaggtgttccagagaaggaa
gtctgcaaggttggcgagtgggcaattcggaaactgggtcttgtgaaatacggagaaaaa
tatgctgggaattacagtggagggaacaggcgcaagctctccacagccattgccctcatt
ggagggccacctgtggtgttcctggatgagccaacaacagggatggatcccaaagcacgt
cgtttcctgtggaactgtgctctgagtgtaatcaaagagggaagatcagtggtgctcaca
tctcacagcatggaagaatgtgaagccctgtgcacccgaatggcgataatggtcaatggg
cgattcaggtgtctgggcagtgtccagcatctaaagaacaggtttggagatggttacaca
atagtggtgagaattgcaggggcaaacccagacctgaagccggttgaggagttctttggg
catgccttccctggaagcgtcctgaaggaaaagcatcggaacatgctccagtaccagctt
ccctcttcaccatcctccctggccagaatattcagtattctctcccagaacaagaagaga
ctccacatagaagactactccgtttctcagaccacacttgaccaagtatttgtaaatttt
gctaaggaccaaagtgacgacgaccacactaaggatctgtcactgcacaaaagccagact
gtggtagacattgcaatccttaattccttccttcaagatgagaaggtaaaagaaagttgt
gtgtga
DBGET
integrated database retrieval system
