Strigops habroptila (Kakapo): 115601157
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Entry
115601157 CDS
T08851
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115601157 (CTCF)
03036 Chromosome and associated proteins [BR:
shab03036
]
115601157 (CTCF)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115601157 (CTCF)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115601157 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
115601157
NCBI-ProteinID:
XP_030326632
LinkDB
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Position
Z:21518590..21554173
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AA seq
750 aa
AA seq
DB search
MKRTNQSRQKCRSIKNLNQEGEMEGEAVESIVEESETFIKGKERKTYQRRREGGQEDDAC
HIPPNQADGGEVVQDVNSGVQMVMMEQLDPTLLQMKTEVMEGAVPQETEATVDDTQIITL
QVVNMEEQPINLGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTL
PLPEGFQVVKVGANGEVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEG
KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRR
SNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELV
RHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHM
RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK
QHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHT
GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCS
GLDGGEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPE
VEQEAPAPPPSKKRRGRPPGKAATQPKQSQPAAIIQVEDQNTGEIENIIVEVKKEPDAET
VEEEEEAQPAVVEAPNGDLTPEMILSMMDR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaacaaatcagtccaggcagaagtgcagaagcatcaagaacctaaatcaggaa
ggtgaaatggaaggtgaggcagtcgaatctatcgtggaggaatcagaaacttttattaaa
gggaaagagagaaaaacctatcaaagacgccgtgagggtgggcaggaggacgatgcttgt
cacataccaccaaaccaagcagatgggggtgaagtagtgcaggatgtcaacagtggtgtg
cagatggtgatgatggagcagctggatccaactcttcttcaaatgaagactgaagtgatg
gaaggcgcagtgcctcaagaaacggaggctacagtggatgacacgcagatcataacgctt
caggttgttaacatggaagagcagcccataaaccttggtgagcttcagctggtccaagta
cctgtaccagtgactgtacctgttgccaccacatctgtggaagaacttcagggagcttat
gaaaatgaggtttccaaaggaggcctgcaagagggagagcccatgatatgtcacaccctc
cctttaccagaaggcttccaagtagtgaaagtgggtgcaaatggtgaggtggagacactg
gaacaaggtgaacttcagccacaagaagatcccaattggcaaaaagatccagactaccag
ccaccagccaaaaaaacaaagaaaaacaaaaaaagtaagcttcgctatactgaggaaggc
aaagatgtggatgtctctgtgtatgacttcgaagaggagcaacaggagggtttgttgtct
gaggtcaatgcagaaaaggtggtgggcaatatgaagccgcccaaaccaacaaaaattaaa
aagaaaggtgtaaagaagacattccagtgtgaactgtgcagttacacttgtccacgtcgt
tccaacttggaccgccacatgaaaagccacactgatgaaagaccgcataagtgccatctc
tgtggcagggctttccggacagtcacgttgctgaggaaccacctcaacactcacacaggt
actcgccctcataagtgcccagactgtgacatggcctttgttaccagtggagagttggtt
cggcatcgccgctacaaacatacccatgagaaaccattcaaatgttcaatgtgtgattat
gctagtgtggaggttagcaaattgaaacgccacatccgttctcacaccggagagcgtcca
ttccagtgcagcttgtgcagctatgccagcagggatacctacaaactgaagaggcacatg
aggacccactctggggagaagccatatgaatgttacatctgccatgctcgcttcactcag
agtgggaccatgaagatgcacattttgcagaagcacacggagaatgtggccaaatttcac
tgtcctcactgtgatactgttatagcgagaaagagtgacttgggtgtccacttgcgaaag
caacattcctacattgagcagggcaagaagtgtcgctactgcgatgcagtgttccatgag
cggtatgccctcatacagcatcagaagtctcacaagaatgagaagcgcttcaagtgtgac
cagtgcgattatgcatgcagacaggagcggcacatggtcatgcacaaacggacccatact
ggagaaaagccttatgcctgtagccattgtgataaaaccttccgtcagaaacagcttctc
gatatgcacttcaaacgataccatgatcctaactttgtccctgctgcctttgtctgttcc
aagtgtggcaaaacattcactcgcaggaatacaatggccagacatgctgataattgctct
ggcctagacggtggggaaggagagaatggaggagagacaaagaagggcaaacgtggccga
aagagaaagatgcggtctaagaaagaagactcctctgacagtgaggaaaatgctgaacca
gatttggatgataatgaggatgaagaggagacagcagtagaaattgaggctgaaccagaa
gttgagcaagaggctcctgcaccacctcctagtaagaaacgaagaggaagaccaccaggc
aaagctgccacccagccaaaacaatctcagcctgcagcaatcattcaggttgaagaccag
aacactggtgaaattgaaaatattatagttgaagtaaagaaggaacctgatgcagaaaca
gtagaggaagaggaggaagctcagcctgctgtagtggaagctcccaatggagacctcact
cctgagatgattctcagcatgatggaccggtga
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