KEGG   Strigops habroptila (Kakapo): 115601212
Entry
115601212         CDS       T08851                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab03420  Nucleotide excision repair
shab04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:shab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115601212 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    115601212 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shab04121]
    115601212 (ERCC8)
   03400 DNA repair and recombination proteins [BR:shab03400]
    115601212 (ERCC8)
Ubiquitin system [BR:shab04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     115601212 (ERCC8)
DNA repair and recombination proteins [BR:shab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      115601212 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_RIG_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD_LRWD1 Beta-prop_EML ANAPC4_WD40 NBCH_WD40 Beta-prop_IFT122_1st WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_LRRK2 eIF2A Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 115601212
NCBI-ProteinID: XP_030326749
LinkDB
Position
Z:81037582..81127021
AA seq 398 aa
MLGLISARQAGLDDPLRLRRAECTRRVLSLELNKDRDVERIHGNGVNTLDIEPVEGRYML
SGGSDGVIVLYDLENLTREPSYTCRALGSVGRSHPDVHTFSVETVQWYPHDTGMFTSSSF
DKTLKIWDTNTLKSADAFHFKGTVYSHHMSPVATNHCLVAVGTKSPKVQLCDLKSGSCSH
ILRGHRQEVLAVAWSPRHEYVLATGSADGRVKLWDVRRASGCLSTLDQHNGEKSKSSSET
ANSAHTGRVNGLCYTNDGLHLLTTGTDDRMRLWNSSTGENTLVNYGKVCNESRKGLKFTI
SFGCDPEFAFVPYGSTIAVYTVFTGELITMLRGHYTAVNCCVFQPNFQELYSGSRDCNIL
AWIPALREPIPDDVSEKSLPQQHLNPAYEDAWSSSDEG
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgttggggttaatctcggctcgtcaggccgggctcgatgacccattgcggctgcgccgg
gccgagtgcacccgcagggttctaagtttggaattaaataaagatagagatgtggaaagg
atacatgggaatggtgtcaacacccttgacattgagcctgtcgaaggaagatacatgtta
tctggtgggtcagatggtgttattgtgctttatgaccttgaaaatttgaccagagaacca
agttacacatgtagagcacttggttctgtgggaaggagccatcctgatgtacatacattc
agcgtggagacagtccagtggtatcctcatgacactggcatgtttacatccagctcgttt
gataaaaccttgaaaatatgggatacaaatactttaaaatctgcagatgcctttcacttt
aaaggaacagtttatagccatcacatgtctccagttgctacaaatcattgtttagtagca
gttggtaccaaaagccccaaagtacagctctgtgacttgaagtctggatcttgttctcac
attctgcggggtcacaggcaagaagtactggcagtggcttggtccccacgtcatgaatat
gttttggcaacaggaagtgctgatggtagagtgaaattatgggacgtgaggagagcatct
ggatgtctgagtacacttgatcagcacaatggagaaaagtccaaatcatcttcggagaca
gcaaacagtgctcacactgggagagttaatggtttatgctatacaaatgatggacttcat
ctgttaaccactggtacagatgatcggatgcgactctggaacagctccactggagaaaat
acattagtgaattatgggaaagtctgcaatgaaagcagaaaaggactcaaatttacaatc
tcctttggctgtgatccggagtttgcctttgtaccatatggtagtaccattgctgtttac
acagttttcacaggagaactgataactatgcttagagggcattacactgctgtcaactgc
tgtgtatttcagcctaattttcaggaactttatagtggtagcagagattgcaatatcctt
gcatggataccagctcttcgagagccaattcctgatgatgtttctgaaaagtctctgcct
caacagcatttaaatccagcatatgaagacgcatggagcagcagtgatgaaggctga

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