Strigops habroptila (Kakapo): 115601272
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Entry
115601272 CDS
T08851
Name
(RefSeq) E3 SUMO-protein ligase RanBP2-like isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
shab03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115601272
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115601272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115601272
03110 Chaperones and folding catalysts [BR:
shab03110
]
115601272
04121 Ubiquitin system [BR:
shab04121
]
115601272
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115601272
Chaperones and folding catalysts [BR:
shab03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
115601272
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
115601272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Pro_isomerase
IR1-M
Zn_ribbon_RanBP
WH1
TPR_1
TPR_2
TPR_CcmH_CycH
TPR_14
ARM_TT21_C
ANC1_spectrin
TPR_8
TPR_16
Motif
Other DBs
NCBI-GeneID:
115601272
NCBI-ProteinID:
XP_030326903
LinkDB
All DBs
Position
2:61421596..61454975
Genome browser
AA seq
3037 aa
AA seq
DB search
MMRRTKPEVERYVASVQAAAPSPREKSMKGFLFAKLYFEIKEYELAKRYISTYLNVQERD
PKAHRFLGQIYEAEDNIEKAFGCYKRSVELNPTQKDLVLKIAELLCNNDITDGRAKYWVE
RAAKLFPGSPAVYRLKEQLLDCKGEDGWNQLFDLIQAELYARPDDVYINIRLVALYRSNN
RLRDAVLHCQEAEKKIPLQSSLEWCSCVVETFEEYLESLQDLESDKSNWRAIKKDHLLAY
SSFVRMTLSSRDVQECREALESFDRVLQSVKPYVNGADELSRTFVEMKGQLYMHAGTLLL
KMAQHNEAQWRVVCELAALCYLISFQVPKPKSKLIKGDQTGQDTLEMLACDRKSQSGHML
LNLSHGKQDFFKEIVESFANKTGSFTLFDSLFESGASRERSFIGTNDIGNVSTQAPVQME
LNKYDTGAVRMHNDSLQHLVWLGLQWNSMSVLPPVRKWLKQLFHLPQETSRLETDAPESI
CLLDLEVFLLGVVFTSNLQLQEKFNSHYGAHQPQFLPLPVCKQLYTEKQKSWWDAVRTLI
QRKTTPGTAAKLRLIVQHGLSTLRTLVKHGLQPALIIHWAKSLQKTGISLNSFYDQKEYI
GRSVYYWKKVLPMLETIKKKRSIPEPTDPLFKHFHSVDIQVFQVAAYEEEARIAFAMLDA
VDGKTDDALSAFEAINNVVSYWNLAMIFQRKAEEMENDTMLPEEQEEHKTYLLKSRHYLM
KIIEESSSDMSVTEKLPVSIETVREMLDTVIQELGENAEEGGPAFRNGLSRAVDSEVKHS
TPSPTKFSLSPSKSYKFSPKTPPQWAEDHRSILQMICQQVEALKNEMQEMKLNNSNSNAS
SHRWPAESYGTDTMSEGYQRAQNLHEAPLTVATTGPSVYYSQSPAYNSQYLLRTAPTNVT
PTKAPVYGMNRLAPQQHIYAYQQPMHTPPLQNPSCMFSQEIYGTPLRFDSPATGLISPRV
GDDYYNYSVPPASTNPSLPKPGYFTKPVESKVVETPKSKFGQPGTAEGSKPPVPPPAQLS
QPTTFKFNNNFKSNDGDFTFPSLQVGTPPGNTAFNNSDSLLSLLTSDKPLQDDRYMEQKP
VNDRLNSQRNTFTFGNKHTPGISFGEGMGQNMHKTLGFEKGDTFSAQEPSKLLYMTSNSD
LANRSHETEGGSTHGGDEDDDGPHFDPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDAE
SKEWKERGIGNVKILKHKVSGKFRLLMRRDQVLKICANHYINTDMKLTPNAGSDKSFVWH
ALDYADEFPKPEQLAIRFKTPEEAMLFKNKFEESQNILKTMGSNVDTSVTQSSGTTREAT
NQDIKEPSRSISGTLNSGFQLPKYGSSSESDNKDSLTAISTTLGTTTSSFGKEAPQTYSS
GGLGQHLLRKDQWECKICFVPNEATVKSCVSCQNPNPDMWETPGTPLTDSAESFKASGNT
VQDTFGSAFAKKEGQWDCTVCSVRNEPTASKCVACRNPNKTNTAVSGQETSSKFGQAIAP
KAVQNDLNTAFSKKEGPWECSTCLVQNEAKDVNCRSCHNPNSQSQPNVSIPTVQASPAPK
FGFIPDLSKPQKNGFEGLFTKKEGQWDCSTCLVRNEGFSPACIACQTPNPSAKTAGDSSP
APAFGMKSKLPEPAGGQLGTGFKCDFLEKGFKFGHEPGKTPSFTFQIPTDTETKPAKEGF
SFSMPVPANGFKFGIQESNKNTTKKDEPSKECTAGFLKSIDEKDKKELPSDSGITFQFQE
TANKEKGDFVFGQNSSTFTFAELAKNTPKEGFQFGKKDPDFKGFSGAGEKLFSSQDSKMD
HKANSSADLGEKDDDVYKTEDSDDIHFEPIVQMPEKVEPFTGEEDEKVLYSQRVKLFRFD
PETSQWKERGVGNLKILKNEVNGKVRILMRREQVLKVCANHWITTTMNLKQLSGSDKAWM
WMANDFSDGDAKLEHLAAKFKTPEQAEEFKQKFEECQRLLLDIPLQTPHKLVDTGRTAQL
IQKAEEMKCGLKDLKTFLTDDKTKLSEEENVNSVCASSTSDLVIKPHAESTGPTLEWDNY
DLREEALDDSVSSSVYASPLASSPVRKNLFRFGESTTGFSFSFKSALSPSKSPAKQNQSR
TSVGTDEDSDVTQEEERDGQYFEPVVPLPDLVEVTSGEENEQVVFSHRAKLYRYDKDANQ
WKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCANHRITPDMNIQQMKGSDRAWVWTACD
FADGERKVELLAVRFKLQDVADSFKQIFDEAKHAQERETLITPLSSRANTPKESPCGKNA
VAVLEETTRERTDLSHGDDTSDATAEVAEVSSTSETPTKTVVSPPKFVFGSESVKSIFSN
EKSKTFTFGNTSATGSLFGFSFNPPKKNEDHIPVAQSTARKELEVSEPPKSSSAPQKPLD
SKVEKLPTSTQDGPSNFSFRIMEKAEKTTTSEDDLPSDEVTIVYELTPTPEQRALAGFLK
LPSTFFCYKNKPGYVSDEDDDEDYETAVKKLNGRLYPSDSGKKKKLQDPVKVGITGKSEF
NNEGECATTWEEKPAPEEKAEAETLEVPSTSVCGVSSDTEDDSPEDFQAEVKTQTKENEV
TSSSDLVCTSEGEVPTPSTSEVTVFAQSAPNSEEPDSTTETVCVSQTGSGAEDTPVDLST
KKSDSDSSQSTQETRVISFGFGNTAGLSFADLASKNSGNFAFGSKDKNFKWANTGAAVFG
ETACKADEDEGGSDDEVVHSDDIHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRWDRDA
TQWKERGVGEIKILFHTQKKYYRVLMRRDQVLKVCANHVITKEMNLVPSDTSNNALIWTA
TDYADGEVKVEQLAVRFKSQELANSFKRRFEECQLSLSELQKGHLSLAAGLSKDTNPIVY
FEVSADDEPLGHITMELFSNIVPRTAENFRALCTGEKGFGFKNSSFHRIVTDFVCQGGDI
TNHDGTGGRSIYGSAFEDENFEVKHTGPGLLSMANKGRDTNTSQFFITLKKAEHLDFKHV
VFGFVKDGMDVVKKIESFGSPKGLVNGRIVITDCGQI
NT seq
9114 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggcgcacgaagcccgaagtggagcggtatgtcgcctctgtgcaggctgccgcg
ccttcccccagagagaaatcaatgaaaggattcctctttgctaagctatattttgaaata
aaagaatatgaacttgctaaaaggtatatatctacatacctcaatgtacaagagagagat
cccaaagcacacagatttcttggacaaatttatgaagctgaggataacatagaaaaagct
tttgggtgttacaagcgttctgtggagttgaacccaacacagaaagatcttgtattgaag
attgcagagttactgtgcaataatgacattactgatggaagagcaaaatactgggttgag
agagctgctaagctctttccggggagtcctgctgtttacaggttgaaggagcagttactg
gattgtaaaggtgaagatggatggaatcagctttttgacttgattcaagcagaactttat
gcaagaccagatgatgtctacataaacatcagactagttgcactctaccgttcaaataat
agattaagagatgctgtgctccattgtcaggaggcagagaagaaaatacctttgcagtca
agcttggaatggtgctcctgtgttgtagagacatttgaggaatatctggaatctttgcaa
gacttggagtctgataaaagtaactggagagctatcaagaaagatcatctgctggcctac
tccagctttgtcagaatgacactttcttctagagatgttcaggaatgcagagaggcactt
gagagttttgatcgtgtgcttcagtcagtgaaaccatatgtgaatggggctgatgagttg
tctcgtacctttgtggaaatgaaaggacagctatacatgcatgctggcactttgctactg
aaaatggcccaacacaatgaggcacagtggagagttgtgtgtgaactagcagcattgtgc
tatctgataagcttccaggttcctaaaccaaagtcaaaactaataaagggggatcaaact
ggacaagatacactagaaatgttggcctgtgatcggaaaagccagtctggtcatatgctg
ctgaacttaagccatggcaagcaagacttctttaaagagattgtggaatcatttgcaaac
aagactggttcatttacattgtttgatagcctgtttgagagtggagcttctagagagaga
tcttttattggcacaaatgatattggaaatgtcagtacacaagcaccagtgcaaatggaa
cttaataaatatgatactggtgctgttcgaatgcacaatgacagtctccagcacctcgtg
tggcttggcttgcagtggaactctatgtcagtcttgcccccagtgcgcaaatggctaaaa
cagctctttcacttgccccaagaaacatcgagacttgagacagatgctcctgaatccatt
tgcctgttggaccttgaagtattcctccttggggtggtattcaccagcaacttacaattg
caagagaagtttaattctcactatggtgcacatcagcctcaattcttaccattgccagtg
tgcaaacagctctataccgaaaagcaaaaatcctggtgggatgccgttcgtactcttatt
cagagaaaaacaacaccaggaacagcagcaaaactgaggcttatcgtacagcatggatta
agtactctgcgaacactggtgaagcatggccttcaacctgccttaattatccactgggca
aaaagcctgcaaaaaacaggcattagccttaactctttctatgaccagaaggaatatatt
ggacgaagtgtctattactggaagaaagttttgcctatgttggaaactatcaaaaagaag
aggagtattcctgaacctactgatcctctcttcaaacacttccatagtgtagacattcag
gtctttcaggttgcagcgtatgaagaagaggcacgtatagcatttgcaatgttggatgca
gttgatggcaaaactgatgatgctttatcagcatttgaagctattaacaatgtggtttca
tactggaatcttgccatgatcttccaaagaaaggcagaagaaatggaaaatgataccatg
ctgccagaagaacaagaagagcacaaaacctatcttcttaaaagcaggcattatctaatg
aagatcattgaggaaagctcctcagatatgtcagtaactgagaaactgccggtgtctatt
gaaactgtgagggaaatgctagatacagtgatccaggaacttggtgagaatgctgaggag
ggaggtcctgccttcagaaatggtctgtcacgagctgtagattcagaggtgaaacactct
actccatcaccaactaagttctctctttcaccatctaagagctacaagttttctcccaaa
actcctcctcagtgggcagaagatcacagatctatacttcaaatgatctgtcagcaagtg
gaagctttaaagaatgaaatgcaagaaatgaaacttaataattccaactcaaatgcatca
tctcatcggtggcctgctgaaagctatggaacagatacaatgtcagagggttatcagaga
gcacaaaatcttcacgaagctccattaacagttgctaccactggcccctctgtttactac
agccagtcacctgcctataactctcagtatcttctcagaactgccccaaccaatgtaaca
ccaacgaaggctcctgtctatggcatgaaccgacttgcacctcagcaacatatatatgct
tatcaacaaccgatgcatacaccgcctctgcaaaacccttcttgtatgttttcccaagaa
atatatggcacacctctgcgttttgattctcctgctactggactcatttctcctcgtgtg
ggtgatgattattacaattacagtgttccaccagcaagcacaaatccgtcattgcctaaa
cctggctatttcacaaagcctgtagaatcaaaagtggtagaaactccaaagtctaaattt
ggacagccaggaacagcagaaggatcaaaaccacctgtgccgccaccagcacagttgagt
cagccaacaacttttaaattcaacaataacttcaagtctaatgatggagacttcaccttt
ccttctcttcaagttggaacgccgcctggtaatacagcttttaataacagcgacagcctc
ttgagtctgctgacatctgataaacctttacaagatgatagatacatggaacaaaaacca
gttaatgatcgcttaaacagtcaaagaaataccttcacttttggcaataaacatactcca
ggcatctcttttggagagggcatggggcaaaatatgcacaaaaccctggggtttgagaag
ggtgatacatttagtgctcaagaaccaagcaagcttttatatatgacttcaaattctgat
ttggccaatagaagtcacgaaacagagggaggaagcacccatggtggagatgaggatgat
gatggtcctcattttgatcctgtggtgccactgcctgacaagattgaagtaaagacaggt
gaggaagatgaagaagaattcttctgcaacagagccaagctctttcgttttgatgcagaa
tctaaagaatggaaagaaaggggtattggtaatgtgaaaatactgaaacataaagtatct
ggcaaatttcgtctcttaatgagacgggaccaagtgttgaaaatctgtgcaaatcactac
ataaatactgatatgaaattaactccaaatgctggatcagataagtcatttgtatggcat
gctttagattatgcagatgagtttccaaaaccagaacagcttgcaattagatttaaaaca
cctgaggaagcaatgcttttcaaaaataagtttgaggagtctcagaatattttaaaaacc
atgggatcaaatgttgacacatctgtgactcagagtagtggaactacaagagaagcaaca
aatcaggacatcaaggagcctagcagatccatttctggaacccttaactctggctttcag
ttaccaaaatatgggtcgagcagtgaatctgataacaaagacagccttacagctatatca
actacacttggcactaccacttcttcatttggaaaggaagccccgcaaacctattcttct
ggtgggcttgggcagcatctcttgaggaaggatcaatgggagtgtaaaatatgttttgtt
ccaaatgaagcaactgtgaagagttgtgtatcgtgtcaaaatccaaatccagatatgtgg
gaaacacccggcacgccattaactgactctgctgaaagtttcaaagccagtggtaacact
gtgcaggacacatttggatctgcttttgctaaaaaggaaggtcaatgggactgcaccgtc
tgttcagtaagaaatgaacccactgcttccaagtgtgttgcctgccggaatccaaacaaa
accaatacagcagtatctggtcaagaaacttcttctaaatttggccaagcaattgctcca
aaggctgttcaaaatgacttgaatactgctttttctaaaaaggaaggtccgtgggaatgc
tccacatgcctagtccaaaacgaagcaaaagatgtgaactgtcgttcttgtcataatccg
aactctcaaagtcaaccaaatgtgtctatacctactgttcaggcatcccctgctcccaag
tttggtttcattcctgatttaagtaagccacagaaaaatggatttgaagggctttttact
aaaaaggaagggcagtgggattgtagtacttgtcttgtgaggaatgaaggtttttcacca
gcctgcatagcttgccaaacaccaaatccatctgctaagactgctggtgattcttcacca
gctcctgcttttggcatgaaaagtaaattacctgaacctgctggaggacagttgggaaca
ggctttaagtgtgatttcttagaaaagggctttaagtttggtcatgagccaggcaagaca
ccatcatttacatttcagattcctactgatactgaaactaagcctgcaaaggaaggattt
agcttttcaatgccagtgcctgcaaacggatttaaatttgggatacaggagtctaataaa
aataccactaagaaggatgagccatccaaagagtgtacagctggcttcttaaaaagcatt
gatgaaaaagacaaaaaggaactgccttcagatagtggaattacattccaatttcaggaa
acggcaaacaaggagaaaggtgactttgtttttgggcaaaatagcagcacttttactttt
gctgagcttgcaaaaaatactcccaaggaaggctttcagttcggcaaaaaagaccctgac
ttcaaaggcttttcaggcgcaggtgaaaagctgttttcttcacaggattctaaaatggat
cacaaagccaactcatctgctgaccttggtgagaaggatgatgatgtgtataagacagag
gacagtgatgatatccattttgaacctatagttcagatgcctgaaaaagtagaaccattt
acaggagaggaagatgagaaagtgttatattcccaaagagtcaagctgttcaggtttgat
ccagaaacaagccagtggaaagaacgtggggtgggcaacctgaagattcttaaaaatgaa
gttaatggcaaagtaagaatactaatgcggcgtgagcaggtactgaaggtgtgcgcaaat
cactggataacaacaacaatgaacttgaaacagctgtctggctcagacaaagcatggatg
tggatggccaatgacttctctgatggtgatgcaaagttggagcatttggcagcaaaattc
aagacgccagagcaggctgaggagttcaaacagaagtttgaagaatgtcagaggctacta
ctagacataccactgcagacaccccataaacttgttgatacaggtaggacagctcaactt
atacagaaagcagaagaaatgaagtgtggcttaaaagacctcaaaacgtttctgacagat
gacaaaactaaactgtcagaagaggaaaatgtaaactctgtttgtgccagcagtacttct
gatctggttataaagccgcatgctgaaagtactgggcctactctggaatgggataactat
gatttgcgtgaagaagcattggatgatagtgtaagtagttctgtatatgcatcacctctt
gcaagtagccctgtaaggaaaaatctgtttagatttggagagtctaccacaggttttagt
ttcagctttaaatctgccttgagcccatccaaatctcctgccaaacagaaccagagtaga
acatcagtaggcacagatgaagattctgatgttactcaagaagaagagagagatgggcag
tactttgaacctgtggtacctctgcctgatcttgtggaagtgaccagtggcgaggaaaac
gagcaggttgtcttcagtcacagagctaagctctacagatatgacaaagatgctaatcag
tggaaagagagaggtattggggatatcaagatactacagaactacgacaacaaacaagta
cgtattgtaatgagaagggaccaggtactaaaactctgtgccaaccatagaataacacca
gatatgaatatacaacaaatgaaaggatctgatagagcatgggtatggacagcatgtgac
tttgcagatggggaaaggaaagtagaacttctagctgtccgattcaagctgcaagatgtt
gcagactcatttaagcagatttttgatgaagcaaagcatgcccaagagagagagacattg
ataacccctctttcttctcgtgccaatacgccaaaggaatctccctgtggtaaaaatgct
gtagctgtattggaagaaactaccagagaaagaactgacctcagccatggtgatgatact
tctgatgcaactgcagaggttgcagaggtgtccagcacttcagaaacaccaacaaaaaca
gtggtttctcctccaaagtttgtatttggatctgaatctgtcaagagcatttttagtaac
gaaaagtcgaagacattcacatttggaaatacttcagctactggttctctctttggcttc
agctttaatcctccaaaaaagaatgaagaccatattccagtggctcagagcacagcccgg
aaagaactggaagtttctgaaccaccaaaaagctctagtgctcctcagaagcctctagac
agcaaggtagaaaaattgcctacttcaacacaagatggaccctcgaacttctcatttaga
attatggaaaaagctgagaagacaacaacgtctgaagatgatcttccatctgatgaggtt
acaatagtttacgaattaacacctacccctgaacagagagctctcgctggctttctcaag
ctaccttcaacattcttctgttacaagaataagcctggatacgtgagtgacgaagatgat
gatgaagactatgaaacagctgttaagaaacttaatggaagactgtatcccagtgattca
ggaaagaaaaagaagttgcaagatcctgtaaaagtaggcatcacaggaaaaagtgaattc
aacaatgaaggagaatgtgctactacttgggaagagaaaccagctcctgaggagaaggct
gaagcagaaactcttgaggttccttctacatctgtctgtggtgtcagcagtgatactgag
gatgacagtccagaagacttccaggcagaagttaaaactcaaacaaaagagaatgaggtt
acaagctcaagtgacttagtctgtaccagtgagggagaggtgcctactccatcaaccagt
gaagtgacagtatttgcccagtcagctcccaacagtgaagaaccagattccaccacagaa
actgtatgtgtatcacagactggatcaggagctgaggacacacctgtagacttgtcaact
aaaaaaagtgattcagactcttcacagtcaacacaagaaaccagagtcatctcatttggt
ttcggcaatactgcaggcttgtcatttgcagatctggcttccaaaaactccggaaacttt
gcttttggctcaaaagataaaaacttcaaatgggcaaatacaggagcagctgtgtttgga
gagacagcctgtaaagcagatgaagatgaaggtggtagtgatgatgaggtggtacatagt
gatgatatccactttgagccgattgtgtccttaccagaggtggaagtaaaatctggagaa
gaagatgaagaaattcttttcaaagagagggcaaaactttacagatgggacagggatgct
actcagtggaaggagcgtggtgttggggagataaagatcctcttccatacacagaagaaa
tactatagagtcctaatgagaagagaccaagttcttaaagtctgtgcaaaccatgtcatc
accaaagaaatgaacttggtgccctctgatacatcaaacaatgctttaatttggacagcc
acagattatgctgatggtgaagtaaaagtagagcaacttgcagtcagatttaaaagtcaa
gaactggctaattctttcaagaggaggtttgaagaatgccagctaagcttgtcagaacta
cagaagggacacttatctctggcagcaggactgtcaaaggacactaaccctattgtgtat
tttgaagtttctgctgatgatgaacctttaggacacataaccatggagctattttcaaat
attgtccctcgaactgctgaaaacttcagggccctgtgcacaggagagaaaggatttgga
ttcaagaactccagttttcacaggatagtcactgactttgtgtgtcagggaggtgatata
actaaccatgatggaacaggcggacggtcaatttatggatcagcatttgaagatgagaat
ttcgaagtgaaacacaccggtcctggattgctgtcaatggcaaataaaggcagggatacg
aatacttcccagttcttcataacacttaaaaaagcagaacacttggacttcaagcatgtg
gtatttgggtttgtcaaagatggaatggatgttgtgaaaaagattgaatcctttggttct
cctaaagggctagtaaatggaagaattgtcattacagactgtgggcaaatatag
DBGET
integrated database retrieval system
