Strigops habroptila (Kakapo): 115601318
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Entry
115601318 CDS
T08851
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115601318 (TOPORS)
03036 Chromosome and associated proteins [BR:
shab03036
]
115601318 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
shab03037
]
115601318 (TOPORS)
Enzymes [BR:
shab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115601318 (TOPORS)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115601318 (TOPORS)
UBL E3 ligases
115601318 (TOPORS)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
115601318 (TOPORS)
Cilium and associated proteins [BR:
shab03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115601318 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
PWI_Topors
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
115601318
NCBI-ProteinID:
XP_030327033
LinkDB
All DBs
Position
Z:complement(46328494..46332975)
Genome browser
AA seq
1096 aa
AA seq
DB search
MPAAYGRFGVAAGGGDTHAHTFPGNAAFAAAAAAHVRAVPALGRGRPPPPPWLSAGRGAV
GGCRRRTLPNAPQAEDGRSPHGERGPGSAGYDLLRGLLQRNMTSADKEFSEDSNFSPKAG
TSKLPTDASPDSKCPICLDRFDNVAYLDRCLHRFCFRCVQEWSKNKAECPLCKQPFFSIF
HTIRAEDDFKEYILSPLENSSFASPDGRRFRYRTTLTGDRRAGRCPSQRTLSPPDNSLFF
EGFFGEPVRQRDGEIQQMMRRLASRRQASAEGRALRQIQEEDLINFRRALYRTGVRIRSI
QDGGRYRDISAEFFRRNPACLHRLVPWLKRELTVLFGAHASLINIVQHIIMSNVTRYDLE
SQAFADELKPFLLNRTEHFLHEFISFARCPFNLEAYDQHANYDCPAPSYDEGSHSDLSVI
TISPDTAYSQGPDNSLSVTGLGQAPWDDETPGPSYSISEEVPATLEMSESSDEDSAAKSQ
RTNLQAQLQANADSNDSDSSSDNCVIVGYVKPLAERTPEVVELSSDSEEPVREEKREDVK
KQQPVCCRSWSDSEPSRSLSPHSTTYKENVGSCRSCLSPAVEKTETKDDDKYKCKVKDLS
SQVLSWSPPPGSDTVCSPWNHRSSRKGKSRSPQSYSRNSHGSHGHRSRRDHHGKSQTKRR
RSRSRDSSKRRNKRSSRRSRAHESKVSLESQRGSFSHESTPSREVSRSRSRSKGHGKRRS
RSRDSDRYYVKDSYQSRHQWGYAFCSRKVFGDGYESSSRRKTQSNDIYSRQSPSPEYRIR
SFIERADPHSQRGLRERHYYCYERCRSRSRSSNRSRTPPGGTERMKSEKPGGKRKYKTRH
LESAFMESTNLERESDPKKTFSEFSDCYKNEDSLSDNRASSDIKHKKKKKKTRSPSVEII
YEGKATDSTRHLKKKKKKHKKKHRKHHTSNSSHSSPPVITIDSDSSRELQIDGSCSSITW
TGTTRVSERGNESPSSVLGRRGSEDYRVVEETEGVARKFSIPTRKGNLDGDIRSAEVELQ
ETTADQNLTMPDASSSTPQTETLTSYVQEAPAAPSSQLPSPRISFLESPERQPLILRVLK
GFVNRSSWFNFPEEKL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgccggcggcttacgggcgcttcggtgttgcggcgggggggggggacacacacgcacac
acgttccccggcaacgccgcgttcgccgccgccgccgccgcccatgtcagagccgttccg
gcccttggccgagggcggccgccgccgccgccgtggctctccgccgggagaggagcggtg
ggaggctgccggcgccggacgctgccgaacgcgccacaggctgaagacggccgcagcccg
cacggggagcgagggcccggcagcgccggttacgacctgctccgtggcctgctgcaaagg
aacatgacttcagcagataaagagttttcagaagatagcaacttttcaccaaaagccggc
acaagcaagctgccaacagatgcttctcctgactctaaatgccccatctgcttggataga
tttgacaatgttgcatatctggatcgctgtttgcacaggttctgtttccgctgtgtccag
gagtggtcaaaaaacaaagcagaatgcccgctctgcaagcagcccttcttttccattttc
catacaattcgtgcagaagatgatttcaaggagtacatacttagcccgttagaaaacagc
tcttttgccagtcctgatggccggagatttcgttaccgtaccaccttaacgggggatcgc
cgcgctggccgttgcccttcccaaaggacgctgtcccccccagataattcactgtttttt
gaagggttctttggcgaaccagtgcggcagagggatggggagattcagcagatgatgagg
aggctggcctcaaggaggcaggcgagcgcagaggggagagctctgcggcagattcaggag
gaggacttgatcaacttccgcagagctctgtaccgtactggtgtgcgtattcgtagcatt
caggatggtggccgctatcgagacatttcagcagagtttttccgccgcaaccctgcctgc
cttcacaggttggttccttggttgaagcgagaacttacagttctgttcggtgcccatgca
tctttgattaatattgtacagcacattatcatgagcaatgtgactaggtatgatctggaa
agtcaggcctttgctgatgagttaaagccatttttgttgaatcgaactgaacacttcttg
catgaattcatcagttttgcccgttgtccttttaacttagaagcatatgatcaacacgcc
aattatgattgtcctgcaccatcatacgatgaaggaagccactcagacttgtcagttatt
acaatatctccagatacggcgtattctcaaggcccagataacagtttgtctgtgactggt
ctgggtcaggccccctgggatgatgaaactccagggccttcctattccatttcagaagag
gttcctgcgactctggagatgtcagaaagttctgatgaagactctgctgcaaaaagtcaa
agaaccaacctgcaggctcagttacaggctaatgctgactcaaatgacagcgattcttcc
tcggacaattgtgttattgttgggtatgttaagccactagctgagaggacaccagaagtc
gttgagctgtcctcggactctgaggaacctgtcagggaagagaaaagggaagatgtgaag
aaacagcagccagtctgttgtcgcagctggagtgatagtgaaccaagcaggagtttatcg
ccacattccaccacatacaaggagaatgtaggtagctgtagaagctgcttatctcctgca
gttgagaagacagaaacaaaagatgatgataagtacaaatgtaaggtaaaagatttgtct
tcacaggtcttaagctggagcccacctccagggagtgacacagtatgctccccttggaat
cacagatcgtctagaaagggaaagtccaggagcccacaatcctattcacggaacagtcat
ggcagtcatgggcatcggtctaggagggaccatcatggcaaaagccaaactaaaaggaga
cgatcaagaagcagagatagtagcaaacgtagaaacaaaagaagcagcaggaggtcaaga
gctcatgaaagcaaagtctctctagaaagccagagaggctcttttagtcatgagagcact
ccatccagagaagtgagcagatcacgatcacgtagcaaaggccatggcaaaaggagatca
agaagtagagacagtgatcgttattatgtaaaagatagttatcaaagtagacaccagtgg
ggatatgctttctgtagtcgaaaggtgttcggagatggctatgaatcctccagcaggagg
aagactcagtctaatgatatctactcaaggcaatctcctagtccagaatatcggatacga
tcatttattgaaagggcagatccacatagccagaggggacttcgtgagagacactattac
tgttatgaaagatgcaggtcaaggagtcgatcaagcaacagatcaaggactcctcctggg
ggaactgagagaatgaaaagtgaaaaacctggtggaaaaaggaagtacaaaactcgccac
ctggagagtgcattcatggagagcacaaatctagaaagagaaagtgaccccaagaaaact
ttctcagaattcagcgactgctacaaaaatgaagacagcctttcagacaatcgagcaagc
agcgatataaagcataagaaaaagaaaaaaaagacaagaagtccaagtgtggagatcatc
tatgaaggaaaagcaacagattccacaaggcatcttaaaaagaaaaagaaaaagcataag
aagaaacaccggaaacatcatacaagtaactcgtcacactcttctccaccggtgattaca
attgatagtgatagtagcagggagctacaaattgatggaagttgcagcagtattacttgg
acaggcaccactcgggtaagtgagaggggaaatgagtctccatcttctgttctgggaagg
agaggatctgaagattacagagttgttgaggaaactgaaggagtagccagaaagttcagt
attcctaccagaaagggaaacttagatggtgacattagaagtgctgaagttgaactccaa
gaaacaacagctgatcagaatcttaccatgccagatgccagcagtagcacccctcaaaca
gaaactctaaccagctacgttcaagaagcaccagcagcgccttctagtcaactgccttcc
cccaggatttccttcctagagagtcctgagagacaaccattgatactaagagtgctaaaa
ggatttgtcaacagatcatcttggtttaatttcccagaagaaaaactgtag
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