Strigops habroptila (Kakapo): 115601377
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Entry
115601377 CDS
T08851
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115601377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115601377
03036 Chromosome and associated proteins [BR:
shab03036
]
115601377
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115601377
Coactivators
SAGA/TFTC/STAGA complex
115601377
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
115601377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
115601377
NCBI-ProteinID:
XP_030327154
LinkDB
All DBs
Position
Z:11655753..11800721
Genome browser
AA seq
1039 aa
AA seq
DB search
MAAGASDPLEEMLLFSEEVDEKAVSDLVGSLESQLAGGRSSAEAPQPRTSAPSQQQQPQQ
HQGSLAGGSSPVRQQQGHPAPPPAPVAEEAVAGCPGAAESRAPTQGQLPSPSPPAAAAAA
AAAAAGRGVSVNSSSVQQSHGAALLSSGGSPGAPAAPAPPQPAAPPPSGAPAQPVNNHVA
AGATAREAGSPSPGGSPPAADSTLPPPQRNEAAEGSGTPAGGGGPAGVAEGASAAATAPL
PGEAAPNGEGAGGRPAAVPPVSSHGRANAATAQIKPAHGPLPAVNALSNSASPAPAAPPG
QGSAANCAPPVPAAPKPAVSAAKAGAAPLAAPQALSPRPALGAAPRIVAPQLIMRPPHQT
TIQLPPGFTIPPGMVLVRTDAGQLVMVPQQALAQAQMQAQVHTQAQGPASISPRLSVPTA
GPVFRLSATQQPTSVATSPVRLGLPVQAKVVQSTAPVSATSAATLPGGSILSHTTVSVAT
TSAQNLFKTTVATGASASQQLAVITGGQTQASAQTQGQPRLPLPPHTTAQVPAQPHVIPS
SPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAKIDPEE
FTARLQSELKSSPQPYLVPFLKKSLPALRQSLLNSQHSVLQGQPSQQSLQQTKLSQVIPQ
SASGSISSVVTTQTMGIRQPNNICTVSVSNTVQPPQVKVVQSNQSSQLQIIQSTSAQTVK
RTPACQTTQIRMPVVITQTIRPQGTVGKAPTIQASKSPGGFGVQVSANQKNKLNDPGGGS
FRDDDDINDVASMAGVNLNEESARIMATNSDLVGTQIQSCKDEPFLAAIPLHKRILEMAK
KLGITDVPAEVVTFISHATQNRLKTVIEKVTMITQHRVESYKDDEWYEQSTDVRSQLKFF
EQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLT
ALAAIGPRKKRKLDSPGLLTTGGEGLGMSSGGQAGLGPPSSRQYARQKITRINLRDFIFY
MEQEREMSHSLLLYRALLK
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcctcggaccccctggaagagatgctgctcttctccgaggaggtggac
gagaaggcggtcagcgatctggtgggctccttggaatcgcagctggccggcggccggagc
tccgccgaggcgccccagcccaggacctccgccccgtcccagcagcagcagccgcagcag
caccaggggagcctagcggggggcagcagccccgtccggcaacagcaagggcatcccgcg
cctcctcccgctcccgtggcagaggaggcggtggcggggtgtcccggagccgcggagagc
cgagcccctactcaggggcagctcccgtccccgtcccccccggcggcggcagcggcggcg
gcagcagcggcggcagggaggggagtgagtgtaaacagtagtagtgtgcagcaatcacat
ggagcggctctcctcagcagcggcggcagccccggcgcgcccgccgcccctgcccctccg
cagcccgccgctcctccgccctccggcgcccctgcccagcctgtcaacaaccatgtggct
gccggcgccactgcccgggaagcggggagccccagccctggcggcagcccgcccgccgcc
gacagcacgctaccaccgccgcaacgcaacgaggccgcggaggggagcgggaccccggcc
ggggggggcgggccggcgggagtggcggagggtgcttctgctgccgccaccgcgccgctc
cccggcgaggcggcgcccaacggggagggtgccgggggccggccggcggcagtcccacca
gtcagcagccacggcagagcaaacgccgccacggcacagataaaacccgcgcacggcccg
ctccctgcagtaaacgcactcagtaactccgccagccccgcgcccgccgccccgccgggg
cagggctcggccgccaactgcgctccgccggtccccgcagcgcccaagccggcagtcagc
gctgcgaaggcgggcgctgcccccctcgccgccccccaggctctttcgccccgtccggca
ctgggcgctgcgcccaggatcgttgccccgcagctgatcatgaggccgccgcaccagacc
accatccagctgccccccggcttcaccatcccgccgggtatggtcttagtgcgcacggat
gctggacagcttgtaatggtgcctcagcaggctctagcacaggctcagatgcaggctcaa
gtacacacgcaggcacagggtcctgccagcatctcaccgagactctccgtgcccacagct
ggccctgtttttcgcctgtcagcaactcagcaaccaacttctgtagccacatctcctgtc
cgcctgggacttccagtgcaagccaaagttgttcagtcaactgcacctgtcagtgctaca
tctgctgcgactctgccaggaggctcgattctctcccataccacagtatcagtagctacg
acgagtgctcagaatttattcaagacaacagtagcaactggagcatcagcttctcaacaa
cttgcagtaattactggtggacaaactcaagcttcagcacaaacccagggtcagcctcgg
ctgccacttccacctcatacaacagcacaagtaccagcacagccccacgtcataccaagc
tctcctgtacctggaactacagttgtatcacaggaaatgcaagagaatgtgaaaaaatgc
aaaaactttttagctacccttataaaacttgcttctcataattcaccatctccggaaaca
tcccgtaatgtgaaagctctggttcaagatttgctggatgcaaagattgatccagaagaa
tttacagcccgccttcagtcggaactgaaatcatctcctcagccatatcttgtacctttc
cttaagaaaagtctacctgcattgagacaatctttactgaatagtcaacattcagttttg
caaggacagccgtctcagcagtcgcttcaacaaaccaagctatcacaagttatacctcaa
tctgcctctggaagcatttcctctgttgtcaccacacagacaatgggaataaggcaacca
aacaacatttgcacagtctctgtatcaaatacagttcagcctcctcaggttaaggtggta
cagtcaaatcagagttctcaactgcagattatccagtcaacatctgctcaaactgtgaaa
cgaacccctgcttgccagactacccagattaggatgccagtggtaataactcagaccatt
agaccacaaggcacagtagggaaggcaccaacaatacaagccagcaaaagtcctgggggc
tttggtgttcaggtctctgcaaatcagaaaaacaagctgaatgaccctggaggtggttct
ttcagagatgatgatgacatcaatgatgttgcctctatggctggcgttaatcttaatgaa
gaaagtgcccgcattatggctaccaactctgacttggttggaacccagatacagtcctgt
aaagatgaaccctttcttgctgctatacctctacataaacgcatacttgaaatggctaaa
aaactcggaattactgatgtgccagctgaggtggttacttttatttcccatgcaacacaa
aacagattaaaaacagtgatagaaaaagtaacaatgataacccagcaccgggtggaatca
tacaaagatgatgagtggtacgaacaatctacagatgtccgatcacagttaaagtttttt
gaacagttggagcgtttagaaaagcaaaggaaagatgaacaagagagggaaatcttgctg
aaggctgccaagagtcgctcaaggcaagaagacccagagcaagccagactgaaacaaaaa
gcaaaggagatgcagcaacaagaacttgcgcagatgaggcagagggatgccaatctcact
gcgttggcagctattggtcctcggaagaaacgaaagcttgattcacctggactgcttacc
acagggggagagggtcttggtatgtctagtggaggccaggctggtttgggccctccttca
tcccggcagtatgcacgacagaaaataactcgcataaacctcagggacttcatcttctac
atggaacaggaaagagaaatgagccattctctcctgctctatcgagctctgcttaaataa
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integrated database retrieval system
