Strigops habroptila (Kakapo): 115601396
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Entry
115601396 CDS
T08851
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115601396 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115601396 (SMARCA2)
03036 Chromosome and associated proteins [BR:
shab03036
]
115601396 (SMARCA2)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115601396 (SMARCA2)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
115601396 (SMARCA2)
Chromatin remodeling factors
BAF complex
115601396 (SMARCA2)
PBAF complex
115601396 (SMARCA2)
GBAF(ncBAF) complex
115601396 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
115601396
NCBI-ProteinID:
XP_030327239
LinkDB
All DBs
Position
Z:complement(73498151..73629589)
Genome browser
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIMPGDPQAMNQPNRGPSPFSPVQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPNAFNRQSGIGLHTMSGATTGP
GPAPGMPGHTAAITPKTWTEGQAPDMSVSNAQQKLPAAPPSGRPSPAPVAAQPAAAMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDEEESSRLEADEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDDEE
EEEEESESESKSVKVKIKLNKKEEKTREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacctacagaccctggcgccatgcctcatcctggtccttcccctggaccggga
ccttcacctggacctattctaggacctagcccaggaccagggccatctcctggctcagtt
cacagcatgatggggccaagtcctggtccacccagtgtcccgcatccaatgccaacaatg
gggcctactgattatccacaggaaggcatgcaccaaatgcataagtctattgatggcttg
catgaaaaaggaatggttgaagatgttcattgtggctccatgaagagtatgcgacctccc
caccctggaatgggaccacctcagagtccaatggaccagcatagccaaggttacatgtct
ccacatccatctccgctgggagcaccggagcatgtgtccagtccgatgtctggaggaggt
ccaactccaccccagatgactcccagccagccaggacccattatgccaggagacccacaa
gctatgaatcagcctaatagaggtccttcccctttcagccctgtacagctgcatcagctg
cgggctcagattctagcatacaaaatgttagctagaggtcagcctttaccagaaaacctt
cagcttgctgttcagggcaagaggacactccctggcattcaacagcagcagcctcccaat
gccttcaacagacagtctgggattgggttacatacaatgagtggtgctacaactggacca
gggcctgctccagggatgcctgggcatacagctgccattacccctaaaacttggactgaa
ggccaagccccagatatgagtgtctctaatgcacagcagaagcttcctgcagcaccccca
agtgggaggccttctcctgcccccgttgctgcccagccggctgccgccatgcccgggcct
tctgtaccacagccaccgcctggacagccttcacccattgttcagctgcagcaaaagcag
aatcgcatcagccctatccagaagccacaagggttggatcctgttgaaatactccaagaa
cgtgaatataggcttcaggctcgaattgctcacagaatccaagaactggagaacttgcct
ggttctctgccccctgatctgcgaaccaaagctacagtggagttgaaggcacttaggtta
ctgaatttccagcgccagctaagacaagaggtggtagcttgcatgcgacgtgacacaacg
ctggaaacagcactgaactcgaaagcttacaaacgaagcaagcgccagactttgagggag
gccaggatgacagagaagcttgagaaacagcagaagatagaacaggagaggaagcgtagg
cagaagcatcaggaatacctgaatagcatattgcagcatgctaaagattttaaagagtac
caccggtcagttgctgggaaaattcagaagctttctaaagctgtggcaacttggcatgcc
aacactgagcgtgagcagaaaaaagaaactgagagaattgagaaggaaagaatgaggaga
ctaatggctgaagatgaagaaggctaccgtaagctgattgaccaaaagaaagatagacgc
ctggcatacctattgcagcagacagatgagtatgtggctaacttgactaacctggtatgg
gagcataaacaggcacaagcagccaaagagaagaagaagagaaggagaagaaagaagaag
gctgaagaaaatgcagagggaatggcatctggtcttggtccggatggagagcccatagat
gagagcagtcaaatgagtgaccttccagtcaaagtgactcatactgaaacaggcaaagtt
cttcttggcccagaagcaccaaaagcaagtcagctggatgcttggctggaaatgaaccct
ggctacgaagttgctcccaggtcagacagtgaagatgaaagtggatctgaatacgaggag
gaggatgatgaagaagaatcaagcagattagaagcagatgagaagatactcctggatccc
aacagcgaggaagtttctgagaaagacgcaaagcaaatcatagagacagccaaacaagat
gtggatgatgaatatagcatgcagtatagtgctagagggtctcagtcctattacactgtt
gctcacgcaatcacagagagagtggaaaagcagtcttctctacttattaatggcacacta
aaacattaccagctccagggactggagtggatggtttcactctataataacaatctgaat
ggaattttagctgatgaaatgggactaggaaagacaatacagactattgcactcatcact
tacctgatggagcacaaaagactcaatggcccatatctcatcattgttcccctttcgact
ttatcaaattggacgtatgaatttgacaaatgggctccttctgtggtgaagatatcttac
aagggcacacccgcaatgcgccgctcactcgttcctcagcttcgaagtggaaaatttaat
gttcttttaactacttatgagtacataataaaggacaaacatatccttgctaagattcga
tggaaatacatgatagtagatgaaggccatcgaatgaagaaccatcattgcaaactgact
caggtcttgaatactcattatgtggcccctaggagaatactgctgactgggactccattg
cagaacaaattgcctgaactttgggctcttctcaatttcctccttccaaccattttcaag
agctgtagcacctttgaacagtggttcaatgctccatttgctatgactggagaaagggtg
gacttaaatgaggaagaaactattctgatcatccgtcgtctccacaaagtgctccgaccc
ttcctgctgagaagattgaagaaggaagttgaatctcaactgccagaaaaggtggaatat
gtgattaaatgtgatatgtcagcgcttcagaagatcctgtaccgtcacatgcaagccaag
ggaatccttctcacagatggttctgaaaaagataagaagggaaaaggtggggcgaaaact
ctcatgaacacaatcatgcaattgagaaagatatgcaatcacccatacatgtttcaacat
attgaggagtccttcgctgaacatttaggctactcaaatggtgtcatcaacggagctgaa
ctttatcgggcctcagggaagtttgagctgctcgatcgtattttaccaaaattacgagcc
actaaccatcgtgtgctccttttctgtcaaatgacatcactcatgaccattatggaagac
tactttgcctttcgaaatttcctttacctgcgtcttgatggcacaacaaaatcggaggat
cgagctgctctgttgaagaagttcaatgaacctgggtcacaatacttcatcttcttgcta
agtacaagggctggagggctaggcttaaatctccaggctgctgacactgtcataatcttt
gatagtgactggaatcctcaccaggacttgcaggcccaagatagagctcaccgaattggt
cagcagaatgaagttcgagtcctgcgtctgtgcactgtgaacagtgtggaagagaagata
cttgctgctgcaaagtataagctgaacgtagatcaaaaagtcattcaggctggaatgttt
gatcagaaatcttcaagccatgaaaggagagccttcctacaggctatattagagcatgaa
gaagaaaatgaggaggaagatgaagttcctgatgatgagactctgaatcagatgattgct
cgacgagaggaggaatttgatctctttatgcgcatggacatggaccgtcgcagggaggat
gcaagaaaccccaagcgtaagccccgcttgatggaggaagatgaattaccatcctggatt
attaaggatgatgctgaagttgaacggcttacgtgtgaagaagaagaagagaaaatattc
ggaagaggatcccgtcaacgcagggatgtggactacagtgatgctctcacagagaagcag
tggctgcgggcaattgaagacggcaacttggaagaaatggaagaggaagtccggcttaaa
aaacggaagagacgaagaaatgtggataaggattctggaaaggaggatggagagaaagca
aagaaaagaagagggagacctcctgcagagaagttgtcacccaacccacccaaactgaca
aaacaaatgaatgcaatcattgatactgtgataaactacaaggatagttcaggacgtcag
ctaagtgaagtcttcattcagctcccctctaggaaagagctaccagagtattatgaattg
attaggaaaccagtcgacttcaaaaagataaaggaaagaattcgcaatcataagtatcgg
agtcttggagatttggagaaagatgtgatgttgctgtgtcacaatgctcagacattcaat
ttggagggatcacagatctatgaggattctattgttcttcagtctgtgttcaaaagtgca
cgacagaagattgccaaagaagaagaaagcgaggatgaaagtaatgatgatgatgaagaa
gaagaggaagaagaatcagaatcagaatcaaaatccgtgaaagtcaaaatcaagctaaat
aagaaggaggaaaaaactcgggagaagggaaaaggcaagaagaggcaaagccgagcaaaa
gccaagcctgttgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
