Strigops habroptila (Kakapo): 115601800
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Entry
115601800 CDS
T08851
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115601800 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115601800 (RABGEF1)
Membrane trafficking [BR:
shab04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115601800 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
115601800 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
115601800
NCBI-ProteinID:
XP_030328065
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Position
13
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AA seq
564 aa
AA seq
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MKKSVSCCCGCGAICIDKKGICLLSPWEGRKKMSLKSERRGIHVDQSELLCKKGCGYYGN
PAWQGFCSKCWREEYHKARQKQIQEDWELAERLQREEEEAYASSQSTQGAQSLTFSKFEE
KKTNEKTRKVTTVKKFFTASSRTGAKKVAQEKGVKQGQLGRERNADNILRDLKEIFTPSW
ELASPTEAEIQEAKAPSPSINRQASIETDRVSKEFIEFLKTYHKPGQDIYKQCKLFLDTM
NHKRDLSIEEQSECAQDFYQNVAEKLQTRWKVPPEKVEKAMDQIEKYIMTRQYKYVFCPE
TTDDEKKDLAVQKRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDK
LACITKCSKHIFNAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRL
MTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRFMTGQTSPKKQESDSFSPDVCLGV
KQMYKNLDLLSQLNERQERIVSEAKKLEKDLIDWTEGITKEVQDIVEKYPLEIKPKSQAL
AAIDSENVENDKLPPPLQPQVYAG
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcagtatcttgttgttgtggctgtggtgcaatctgcattgacaagaagggt
atctgcttactcagtccctgggaaggaaggaagaaaatgagcctgaaatctgaacgcaga
gggattcacgttgatcagtcggagctactgtgcaagaagggatgtggttactatggcaat
cctgcttggcagggtttttgctccaagtgctggagagaggaataccataaggccaggcag
aaacagattcaagaggactgggagctggcagagcggcttcaacgtgaggaagaagaagcg
tatgccagtagccagagtacccaaggggcacagtcactcaccttttccaagtttgaagaa
aagaaaaccaatgagaaaacacggaaagtcactactgtgaagaagttcttcactgcttct
tcgagaacaggagctaagaaggtggctcaagagaaaggcgttaagcaaggacagcttggg
agggagcgaaatgctgataacattctcagggatttgaaggagatttttactccctcctgg
gaactggcttcccctactgaagcagagatccaagaagccaaggctcccagcccttctata
aacaggcaggctagcatcgagacggatcgagtatccaaggaattcatagaattcctcaag
acataccataagcctggacaagatatctataagcaatgtaaactctttttggacaccatg
aatcataaaagggacttaagtattgaggagcaatctgaatgtgctcaggacttctatcaa
aatgtagcagagaaattacagacacgttggaaagtgccccctgaaaaagtggagaaagca
atggatcagattgaaaaatacattatgactcgacagtataaatacgtcttttgccctgaa
acaactgatgatgagaagaaagatcttgctgtccaaaagagaatcagggctttgcactgg
gtaactccacaaatgctctgtgttcctgtcaatgaagaaatcccagaagtctctgatatg
gtcgtaaaagcaattacagatatcattgaaatggattcaaagcgtgtccctcgtgataaa
ctagcatgcatcaccaagtgcagcaagcatatatttaatgcaataaaaatcacaaaaaat
gaaccagcttctgctgatgactttcttccaacacttatatacatcgttttgaagggaaac
ccaccccgtctgcagtctaacatccagtatatcacacgcttctgtaatccaagcaggtta
atgacaggagaagatggctactattttacgaatctgtgctgtgccgtggccttcattgaa
aaactggatgctcagtctttaaacctaagccaagaagactttgatcgttttatgactggt
cagacatcgccgaagaagcaagaatctgacagtttctcacctgatgtgtgcctgggtgtt
aagcagatgtataaaaacttagacctcctgtctcagttgaatgagaggcaggaaagaatt
gtcagtgaagccaagaagcttgagaaagacctaatagattggactgaaggaattacaaag
gaagtccaagatattgttgagaaatatccattagaaataaaaccaaaaagtcaagcctta
gcagctattgactctgaaaacgtggagaatgacaagctgcccccgccactgcagcctcag
gtgtatgcaggataa
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