Strigops habroptila (Kakapo): 115601823
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Entry
115601823 CDS
T08851
Symbol
NUP88
Name
(RefSeq) nuclear pore complex protein Nup88 isoform X1
KO
K14318
nuclear pore complex protein Nup88
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115601823 (NUP88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115601823 (NUP88)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115601823 (NUP88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
STX6_10_61_N
Citrate_synt
Motif
Other DBs
NCBI-GeneID:
115601823
NCBI-ProteinID:
XP_030328108
UniProt:
A0A672UGW3
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Position
13
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AA seq
724 aa
AA seq
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MAAESGPAEQWRSALPQHEVLGRLRERQSAAPPAAARPPLIRNLLFGLDGDLFLWDGEHS
ALHTIGLRRLGGPDAAGLSRYQTLMCINPPLFEVYQTLLSPTQHHVALIGTKGLMVLELP
KRWGKNSEFEGGKSTVNCSTVPIAERFFTSSTSLTLKHAAWYPCETLEPHIVLLTSDNTI
RFYSLKVPHTPIKVIALSDTEEETFTIKKGRAYTASLGETAVAFDFGPLVPVPKNTLGQR
GSDEVLAYPLYILYENGETFLTYIRLLQSTGSLGKLLGPLPMHPAAEDNYGYDACAVLCL
PCVPNILVIATESGMLYHCVVLDGEEDDDQSEKSWDPRSDLIPSLYVFECVELELALKLA
SGDEEEPLESDFSCPIKLHRDPKCPSRYHCTHEAGVHSVGLTWINKLHKFLGSDEEDKDS
LQELGAEQKCFVEHILCTKPLPCRQPAPIRGFWIVSDILGPTMICITNTYECITRPLLST
VHPASPPLLCTREDKEVAVSPLRILAESQHSFEKHIRGILQRSSANPLLLKSADKDAAPP
PEECLQLLSRATQVFREEYILKQDLAKEEIQQRVKLLWGQKKKQLEELNYCREERKSLRE
MAERLADKYEEAKEKQEDIMNRMKKVLRSFHSQLPVLSDSEKDMRKELQTIHDQLQHLSN
AIRQVKMKKEYQQKKMEKGSSPRKPSISLSAYQSKCIQTVLKEEGEHIREMVKQINDIRS
HVNF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagagcggcccggcggagcagtggcgctcggccctgccgcagcacgaggtg
ctcggccgcctccgggagcgccagtctgccgcgcctcccgccgctgcccggccgccgctc
atccgcaacctcctcttcggcctcgacggagacctcttcctctgggacggcgagcacagc
gccctccacaccatcggcctccgccgcctcggcgggcccgacgccgcggggctcagccgg
taccagaccctgatgtgcataaacccgcccctgttcgaggtttatcagacgctgttaagc
cccacgcagcatcatgtggcgctcatcggtacgaaggggctcatggtgctggagctgcct
aaacgctgggggaagaattcagagtttgaaggtgggaaatccacggtgaactgtagcact
gtccctattgcggaaaggttcttcacgagctcaacatctctgactttaaagcacgctgcc
tggtatccctgcgagacactggagccccatattgtgctcttgacttcagataacactata
cggttttacagtctgaaggtacctcacacacccatcaaagtgattgctctttcagacact
gaggaggagacttttacaatcaaaaaagggagagcctacacagcatcgctgggagagacc
gcggtggcgtttgacttcggcccgctggtgccggtcccaaagaacacgctgggacagcga
ggcagtgacgaggtgttggcctatccactgtacattctgtatgaaaatggagagacattc
ctcacctacatccgcctgctgcagagcactgggagccttggcaagctgcttggccctctg
cccatgcaccctgcggcagaagacaactacggctacgatgcctgtgctgtcctctgcctg
ccctgtgttccaaacatcctggtgattgccaccgagtcgggaatgctttatcactgcgtg
gtactggatggagaagaggatgatgatcagtcagaaaagtcatgggacccaagatctgat
cttattccttccctgtacgtgtttgaatgtgttgagctggaacttgcactgaaactggca
tcaggagacgaagaggagcctttggaatctgacttctcttgcccaatcaaattgcatcga
gatccgaaatgtccctctcgctaccactgcacacatgaagctggtgtccatagcgtgggg
ctgacgtggatcaataaactgcacaaattccttggctcagatgaagaagacaaagacagt
ttacaggaattgggagcagaacagaagtgctttgttgaacatattctttgtacaaagccg
ttgccatgcaggcagcctgctccgatccgaggcttttggatcgtttctgacatcctgggg
cccacgatgatctgcatcaccaacacctacgagtgtattacgaggcctctcttaagtaca
gtccatcctgcatcccctccgctgctgtgtaccagggaggacaaagaggttgctgtttcc
cctctccgtatcctggctgagtcacagcattcatttgagaagcatatccgaggcatcctg
cagcgcagctctgccaatcccttgcttctgaagtctgctgataaagatgctgctcctccc
cctgaagaatgccttcagcttcttagtagagccacccaagtgttcagagaggagtacata
ctgaaacaggatctggcaaaagaggaaattcagcaaagagtgaagctgctctggggacag
aaaaagaaacaactggaagagcttaattactgccgagaggaaaggaaaagcctgcgggaa
atggccgagcgcttggctgacaagtatgaagaagccaaagagaagcaagaagatattatg
aacaggatgaagaaagtacttcggagtttccactctcagcttcctgttctgtcagacagt
gaaaaagacatgaggaaagagctgcagacaatccatgaccagctgcagcacctgagcaat
gccatcagacaggttaaaatgaaaaaggaataccagcagaagaagatggagaagggttcc
agcccccgaaaacccagcatcagcctcagtgcctaccagagcaagtgcatccaaaccgtc
ctgaaagaagagggagaacacatcagggaaatggtcaaacagatcaacgacatcagaagc
cacgtgaacttctga
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