Strigops habroptila (Kakapo): 115601944
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Entry
115601944 CDS
T08851
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115601944 (SUPT6H)
03036 Chromosome and associated proteins [BR:
shab03036
]
115601944 (SUPT6H)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
115601944 (SUPT6H)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
115601944 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
clamp_Gag1-like
Tex_N
DUF6656
Motif
Other DBs
NCBI-GeneID:
115601944
NCBI-ProteinID:
XP_030328389
UniProt:
A0A672TVP7
LinkDB
All DBs
Position
13
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVR
KMSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPPEEEEEEEEDESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYE
YEDEEAEGETRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLR
SIPVKNAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKE
ALNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKAARKKQKRIREDGEEEEGDGEDAEDDEQKGPELKQASRRDMYTICQTAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYLKNKPVKELRDDQFLKMSLAE
DEALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQF
LYVQMAKELKNKLLVEAKDYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFL
LNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
NEFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTM
CHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTP
YRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDLKRKQ
QRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQH
VDVREEGKENAFSLGSMLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDK
KKLEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQV
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPS
YSYTTPSQPITTPQYQLQANTTPQSTQSQTQSQPSSSSRQRQQPKTTNHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcgtagaaagtgaagcagaagagtcagaggaagagtacaaccaggacggg
gaggttgtgcccagagtaaccaagaagtttgtggaggaggatgaggatgatgaagaggag
gaggaggagaatcttgatgatcaagatgagcaggggaacctgaaaggattcattaatgat
gatgacgatgaggaagaagaagaggaggaagaagccagtgactctggagactccgaagat
gatgttggccacaaaaagagaaagcgcacttttgatgaccgcctggaggatgatgatttt
gacctcattgaagagaacttgggtgttaaagtcaaaagacaaaaattcaggcgtgtgcgg
aaaatgtctgatgatgaggatgatgaggaggaagactatggaaaggaagaacacgagaag
gaagccattgctgaagaaatctttcaggatggcgaaggcgaggaaggaggggaagctgtt
gaagctcctgttgctccaccagaagaggaagaggaggaggaggaagatgaatctgacatt
gatgacttcattgtggatgatgatggacaacctctgaagaagccaaaatggcgaaagaag
ctccctggatacacagatgctgctttgcaggaagcccaggaaatcttcggtgtggacttt
gactatgatgagtttgagaagtacaatgagtacgatgaggagatggaggaggaatatgag
tatgaggatgaagaagccgaaggggagacccgtgtacgacccaaaaagactgccaagaag
cgcgtcagtcggcgaagcatctttgagatgtatgaacccagtgagctggagagcagtcat
ctaacggaccaggacaacgagatccgcatgacagacatgcctgagaggttccagttgcga
tccatcccggtgaagaacgctgaggatgatgagctggaggaagaagctgattggatttat
aggaacgcatttgcgacacccaccatctccttgcaggaaagttctgactacctcgaccgt
ggacaagccagcagcagcttcagccgcaaggggcccagcaccatccagaagattaaagaa
gccctgaatttcatgagaaatcaacattttgaggtcccattcatcgccttctacagaaag
gagtatgtggagccagagctgcacatcaacgacttgtggagggtttggcagtgggatgag
aagtggacccagctgaagatccgcaagcagaacctgacacggctgtttgagaagatgcag
gcctatcagtatgaacaaatctctgctgacccagataagcccttggctgatggaataaga
gccctggatactactgacatggagaggctgaaggacgtgcagtccatggacgagctgaag
gacgtgtataatcacttcctgctgtactatgggcgagacatccccaagatgcagaatgct
gccaaggctgctcgaaagaagcaaaagcgtatccgagaggatggtgaagaggaggaaggt
gacggggaggatgcagaagatgatgagcagaaggggcctgagctgaagcaggcttcccgg
cgggatatgtacaccatctgtcaaacagctgggctggatggcctggctaagaagtttggt
ttgactcctgagcagtttggagagaatctccgagacagttaccagcgtcacgagacagag
cagttccctgcagagcccctggagctggccaaggattatgtgtgtagtcagttcccaagc
cctgaagctgtgctggaaggagcccggtacatggtggctttgcagatagccagggagcct
ttggtcaggcaggtcctgagacagactttccaagaaagagctaaaatcaacatttcacca
actaaaaaggggaagaaggatattgatgaagcccactatgcctattcctttaaatacttg
aagaacaagcctgtgaaggagctgcgagatgaccagttcctgaaaatgagcctggcagag
gacgaggcactgctcactatagatatcagcattgacatgaaaggagtggagggctatggt
agtgaccagacatactttgaggaaatcaagcagttctattaccgggatgagttcagccat
caggtgcaggagtggaatcggcagcgtacgatggccatcgagcggtccctcaaccagttc
ctctacgtgcagatggctaaagagctgaagaacaagctgctggtggaggccaaggattat
gtcctcaaggcttgcagccggaaactgtacaactggttaaaagtagcttcctaccgtcct
gatcagcaagtggaggaagatgatgatttcatggatgaaaaccaagggaaggggattcgg
gtgctgggcattgccttttcctcagccagggaccaccccgtgttttgtgcccttgttaat
ggagagggtgaggttacagacttccttcgactgccacatttcacaaagagaaggaatgcc
tggcgtgaggaggagagggagaagaaggcccaggatattgaaaccttgaaaaaattcctt
ctgaacaagaaacctcacgtggtgacaattgcaggcgagaacagggatgctcagatgctg
atggaggatgtaaagagaattgttcacgagctggatcaagggcagcagctgtcctctatt
ggtgtggagctggtggacaatgaactggccatcctctacatgaacagcaagaagtctgag
aatgaattcagggattaccctcctctgctgcgtcaagctgtctcccttgctcgccgcatc
caggaccctctcatagagtttgctcaggtctgcagctctgacgaggatattctctgcctg
aaactccaccctctgcaggagcatgtggtgaaggaggagctgctcaatgccctctactgc
gaattcataaaccgtgtgaacgaggtgggagtggatgtcaatcgggccattgctcaccct
cacagccaggctttgctgcagtatgtgtgtggcctgggaccacgcaaaggcactcatctg
ctaaagatcttaaaacaaaacaacacacgtctggagaacaggacccagctggttaccatg
tgccacatgggacccaaggtgtttatcaactgtgctggcttcatcaagattgacacggcg
tcgctgggcgatagcactgattcctacatcgaagtcctagatgggtccagggtccatcct
gaaacctatgaatgggcaagaaaaatggcagtggatgccttggaatatgacgagtcggcg
gaggatgctaatcctgcaggagctctagaggagatcctggaaaaccccgagcgtctgaag
gacctggatctcgatgcctttgctgaagaactggaaagacagggctatggtgacaagcat
atcactttatatgacattcgagctgaactaagctgcaggtacaaggacctgagaacccca
tatcgttctccaaacacagaagaggtcttcaatatgctgaccaaagaaactccagagact
ttctatataggtaaaatgatcatctgcaatgtgactgggatagcccacaggcggccgcaa
ggagagagctacgaccaggcgatacggaacgatgagactggcctttggcagtgtcctttc
tgtcagcaggacaacttcccagagctcagcgaggtttggaaccactttgacagcggttcc
tgcccaggtcaggccattggagtgaagacgcgtctggataatggtgttgctggcttcatc
ccaacaaaatttcttagtgataaggtggtcaagcggccagaagaaagagtgaaggtggga
atgaccgttcactgcaggattatgaagattgacattgagaagttcagtgcagacctgacc
tgcaggacctcagacctgatggataagaacaatgagtggaaactgcctaaagacacctac
tacgactttgactctgaggcagcagatcacaaacaggaggaagacctgaaaagaaagcag
cagcggacaacatacatcaagagagtaattgctcacccatcattccacaacattagcttc
aagcaagctgagaagatgatggagaccatggaccaaggggatgtgattattcggccaagt
agcaaaggggagaaccacttgactgtcacctggaaggtgaatgatgggatttaccagcat
gtggatgtccgagaagaaggcaaggagaatgccttcagcctgggctccatgctttggatt
aacacagaggagtttgaagacctggatgaaattgttgctcgctatgtccagccaatggct
tcttttgccagagacctgttgaatcacaaatactaccaggactgcaacggtggagacaag
aagaagctggaagagctgctgataaagaccaagaaagagaagccaacgtttattccctac
tttattagtgcctgtaaagatctacctggcaaattcctcttgggatatcagcctcgaggc
aaaccaaggatagagtatgtgacagtgacaccagaaggattccgctaccggggccaggtc
ttccctactgtgaacggactcttccgatggtttaaggatcattatcaggaccctgttcca
ggtattaccccaagcagtagcagtcggaccaggactccagcctccattaatgctactcca
gctaacattaacctggcagacctgacccgtgcagtgaatgctctaccacagaacatgact
tcccagatgttcagtgccatcgctgccgtgacaggccagggacagaatccaaatgccacc
cctgcacaatgggcatccagtcagtatggctatggaggcagcggaggtggcagcagcgcg
taccacgtcttcacgactccagcacagcaaccagtggccacccctctgatgacccccagt
tactcctacactacccccagccagccgatcacaacaccccagtaccagctccaggccaac
accacaccccagtccacccagtcccagacacagtcccaaccatcatccagctccaggcag
aggcagcagccaaagaccacgaatcacgctgccatagactgggggaagatggccgagcag
tggctgcaggagaaggaggctgaacggaggaaacagaagcagaggttgactcctcgcccg
tctcccagccccatgatcgagagcacacccatgtccatcgctggggacgccacaccactg
ctggatgagatggatcgatag
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integrated database retrieval system
