Strigops habroptila (Kakapo): 115602069
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Entry
115602069 CDS
T08851
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115602069 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115602069 (TRPV1)
Ion channels [BR:
shab04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115602069 (TRPV1)
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Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ion_trans
Ank_3
Ank_5
Ank_4
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
115602069
NCBI-ProteinID:
XP_030328668
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Position
13
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AA seq
923 aa
AA seq
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MLFFQSDSKDTRNLKDCLLIMSSVLAKMKKFGSSDMEESEATDEHTDGEDSAVEMPDSLQ
GTLNTKVQPPKSNIFARRGRFVMGDSDKDMAPMDSLYQMDHLLAPSVIKFQANSERGKLH
KLLSIDSITGCSEKAFKFYDRRRIFDAVAQGNTRDLDDLLLYLNRTLKHLTDDEFKEPET
GKTCLLKAMLNLHDGKNDTIPLLLDIAKKTGTLKEFVNAEYTDNYYKGQTALHIAIERRN
MYLVKLLVQNGADVHARACGEFFRKIKGKPGFYFGELPLSLAACTNQLCIVKFLLENPYQ
AANIAAEDSMGNMVLHTLVEIADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKG
LTPLTLAAKTGKIGIFAYILRREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKN
SVLEIIAYSSETPNRHEMLLVEPLNRLLQDKWDRFVKHLFYFNFFVYTMHIIILTAAAYY
RPVEKKEKPPFTFGHSTGEYFRVTGEILSVLGGLYFFFRGIQYFVQRRPSFKTLIVDSYS
EVLFFVHSLLLLSSVVLYFCGQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKM
ILRDLCRFMFVYLVFLLGFSTAVVTLIEDDNEGQDTNSSEYSRCCQVKRGRTSYNSLYYT
CLELFKFTIGMGDLEFTENYRFKSVFVILLVLYVILTYILLLNMLIALMGETVSKIAQES
KSIWKLQRAITILDIENSYLNCVRRSFRSGKQVLVGVTPDGQDDYRWCFRVDEVNWSTWN
TNLGIINEDPGCFGDLKRNPSYSVKPGRVSGKNWKTLVPLLRDGSRREETQKLPEEVKLK
PILEPYDEAEYSETLKESLPNNHTGKDIWCCKSIWLDYKENQEQYLREKIGRCSKTTDRN
PGKRGNNRRNFGILLKSGWPGRN
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgttattctttcagagcgattctaaggacacaaggaacctgaaagactgcttgctcatc
atgtcttctgttcttgcgaagatgaagaaatttggcagttctgacatggaggaatctgaa
gcgacagatgaacacacggatggggaggactccgcagtggaaatgcctgacagcctccaa
ggtacactaaacaccaaggtgcagccacccaaaagcaacatctttgcaagacgtgggagg
tttgtgatgggggatagtgacaaggacatggctcccatggactccttgtaccagatggat
cacctgttggcaccttctgtcatcaaatttcaagccaattcggaaagggggaaacttcac
aagctcctatctatagattccatcacaggctgctcagaaaaggctttcaaattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaagggacctggatgatctgcta
ctctaccttaatagaaccttgaagcatctcacagatgatgagttcaaagagccagaaact
gggaaaacctgtttactgaaagccatgctgaatcttcatgatgggaaaaatgacaccatt
cccttgctgctggatattgcaaagaaaactggaactctgaaagagtttgttaatgcagag
tatacggacaactactacaagggccagactgcacttcacatcgccattgagagaaggaac
atgtacctggtgaagctcttggtccagaatggagcagatgttcatgcaagagcctgtggg
gagttcttcaggaaaatcaaagggaaacctggcttttattttggggagctgcctctatcc
ctggctgcctgcaccaaccagctctgcattgtgaaattcctccttgagaacccctatcag
gccgccaacatcgctgctgaggactccatgggcaacatggtcctgcacacgctggtggag
attgcagataatactaaggataataccaagtttgttaccaagatgtacaataacatattg
atccttggtgccaaaattaatccaatcctgaagctagaagaactcaccaacaagaaaggg
ctcactccattaactctggcagccaaaacagggaagatagggattttcgcttacatcctc
agacgagagatcaaagatcctgagtgcagacacttgtctaggaagttcactgaatgggct
tatggacctgtccactcatccctttatgacctgtcctgtatagacacatgtgagaaaaat
tcagtgcttgagattattgcctacagcagtgaaaccccaaaccgtcatgagatgctgctg
gtggaaccccttaacaggctgctacaagacaagtgggaccggtttgtcaaacacttattt
tacttcaacttctttgtctatactatgcacatcatcatcctcactgcagcagcttactac
agacctgtagagaagaaggagaagccgcccttcacatttggtcacagcactggggaatac
tttcgagtgactggagagatcttgagtgtactgggaggtctctatttttttttcagaggg
atacagtatttcgtgcagaggcgcccgtcattcaagacactgatagttgacagctacagt
gaggttcttttctttgttcactccttgctccttctgagctctgtggtgctatacttctgt
ggccaggaactgtacgtggcttctatggtcttctccttggcgctgggctgggctaacatg
ctgtactacacccgtggcttccagcagatgggcatttactctgtcatgattgccaagatg
atccttagagacttatgtcgcttcatgtttgtctatctagtattcctcttgggattttct
acagctgtggtgactttaattgaagatgacaacgaggggcaagacacaaatagctctgaa
tattcccgatgttgccaggtgaaacgaggccgcacatcctacaacagtctgtattatacc
tgcttggagctcttcaagttcactattgggatgggggacctggagttcacagagaactac
aggttcaagtcagtgtttgtcatccttttggttctttatgtcatccttacatacatcctc
ctgctcaacatgcttattgcactgatgggggaaactgtgagcaaaattgcacaggagagc
aagagcatctggaaactccagagagccatcacaatcttggatattgagaacagctacttg
aactgtgtgaggcgctcgttccggtctgggaagcaagtcttggtgggggtcacacctgat
ggccaagatgattacagatggtgctttagggttgatgaagttaactggtccacgtggaat
actaatctgggcataatcaatgaagaccctgggtgctttggggacctcaaacgaaatccc
agttactctgttaagcctggcagagtttcagggaaaaactggaaaacactggttccgctt
ttaagagatggaagccggagagaagagacacaaaaactaccagaagaagtcaaattaaaa
cctattttggaaccttatgatgaggcagaatattctgagacgttgaaggagtcacttcca
aacaaccacacggggaaagatatctggtgctgcaaatccatctggctggattacaaagag
aatcaggaacaatatctgagagagaaaataggcagatgttccaaaactacagataggaac
cctggaaagagaggaaataataggaggaactttggcatcctcttgaaaagtggctggcca
ggacggaactaa
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