Strigops habroptila (Kakapo): 115602081
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Entry
115602081 CDS
T08851
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shab03009
]
115602081 (DDX52)
Enzymes [BR:
shab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115602081 (DDX52)
Ribosome biogenesis [BR:
shab03009
]
Eukaryotic type
90S particles
Helicases
115602081 (DDX52)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SecA_DEAD
DUF2934
Motif
Other DBs
NCBI-GeneID:
115602081
NCBI-ProteinID:
XP_030328713
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Position
13:complement(10731245..10739018)
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AA seq
616 aa
AA seq
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MEARELFRRLGAGARFDLRRFGLDARRFGVIRGNGGSASLESLDFFGHKEGAPEGSAEEG
WAGAEEEVKGGEEDGAGKSGGETTGKRKRAAESGEGKRKKKKTRGAVPELSESNGIKWMS
SLEAKYEDAKDKKPTAEKLERLRRQKINHFRNQHKISVQGTDLPDPIATFDQLQKEYKIH
PKIMENIQAAGFRVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFCIPLLTHLKQPRNK
GFRALIISPTRELASQTHRELVKLAEGTGFRIHMIQKAAEAAKKFGPKSSKKFDILVTTP
NRLIYLLKQDPPAIDLTSVEWLVVDESDKLFEDGKSGFREQLASIFLACTSHVVRRALFS
ATFAHDVEEWCKLNLDSVVLVSVGARNSAAETVEQELLFVGSETGKLTAMRELVKKGFAP
PVLVFVQSIERAKELFHELIYEGINVDVIHADKTQQQRDNVVRSFRAGKIWVLICSALLA
RGIDFKGVNMVINYDLPTSAVEYIHRIGRTGRAGHTGKAVTFFTEDDKPLLRSIANVIQR
AGCPVPDYIKHFPKLQSKQKKKFIKKPLTRESICTTPECFLKKAKRKMKTAKENFKEKKK
AKEDKNVSKLQAVSKS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcgggagctgttccggaggctcggcgccggtgcccgctttgacctgcggcgc
ttcgggctcgatgcgaggcgcttcggggtgataaggggaaacggcggcagcgcctcgctg
gagagcctcgacttcttcgggcacaaggagggggcccccgaggggtctgctgaggagggc
tgggcaggggctgaagaggaggtaaagggtggagaggaggatggagccgggaaaagcggt
ggagagacgacgggaaagaggaaaagagctgcagaaagcggtgaagggaagagaaaaaag
aaaaagacacgaggagcagtaccagagttgtcagaaagtaacggcataaagtggatgtcc
tctctggaagcaaaatatgaagatgcgaaagacaaaaaacctactgcagaaaaacttgaa
cgcttgagaagacaaaagataaaccacttcagaaatcaacataagatcagtgtccaagga
acagatcttcctgacccgattgccacgtttgatcagcttcagaaggaatacaaaatccac
cccaaaatcatggagaatattcaggctgctggtttccgggtgccaacacccatccagatg
caggcgattcccgtcatgcttcatggccgggaacttctggcttcagctcctactgggtct
ggaaaaacactggcattttgtattcctctcttaacacatctgaaacaacctaggaacaaa
ggattcagagctctaatcatatcgcctacccgagaacttgctagccagacacatcgcgag
ctggtgaagttggctgaggggacaggcttcaggatacacatgatccagaaagcagctgaa
gcagcgaagaagtttgggcccaagtcttcaaagaaatttgatatactggttactactcca
aacagactcatttatttgctgaagcaagatcctccagcaatagacttgaccagtgtggag
tggctggtggtggatgagtcggacaagctctttgaagatgggaagtcgggcttccgggag
caattggcctccatcttcctggcgtgcacgtcccatgtggtgagacgagccttgttcagc
gccaccttcgcccatgacgtggaggagtggtgtaagctcaacctggacagcgtggttctg
gtgtctgttggagcaaggaactcggcagcagagacggttgaacaggagctgctgtttgtt
ggctccgagacaggaaaactcacagccatgcgagagcttgtgaaaaagggttttgctcct
cctgtccttgttttcgtgcagtctattgagagggctaaagagcttttccatgaacttatt
tatgaaggcatcaatgtggatgtcatccatgcagacaaaactcagcaacagagagataat
gtagttcgcagcttcagagctgggaagatctgggtgctcatctgctcagccttactagct
cgagggattgacttcaaaggagtgaacatggtcatcaattacgatttgccaacgagtgca
gtggaatacatccacaggataggtcgtacaggacgagctgggcacacaggaaaagcagtc
acgttcttcacagaggacgataaacctttgttacggagcatagccaatgttattcagcga
gctggctgtcctgtgccagactacataaaacacttccccaaactgcaaagcaaacagaag
aagaaattcattaagaaaccattgacaagagaatccatttgtaccacccctgagtgcttc
ttgaaaaaggccaaaagaaaaatgaaaactgccaaggaaaattttaaggaaaaaaagaaa
gctaaagaagataaaaatgtcagtaaactacaggctgtttccaaaagctga
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