Strigops habroptila (Kakapo): 115602094
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Entry
115602094 CDS
T08851
Symbol
MED13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115602094 (MED13)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
115602094 (MED13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
115602094
NCBI-ProteinID:
XP_030328731
UniProt:
A0A672UKS6
LinkDB
All DBs
Position
13:complement(4220248..4275233)
Genome browser
AA seq
2179 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLSVWRRDQRPGRRELWIFWWGDDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
SQHQPVYLLSEEHLTLAQQSNSPFQVILSPFGLNGTLTGQSFKLSDSSTKKLIGEWKQFY
PVTSNLKEGSEEKQEDMDWEDDSLAAVEVLVAGVRMVYPACFVLVPQTDIPAPSTVGASH
CSTTCLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDAQSAQKWVKFSSVSDGFISDST
SHHGGKIPRKLANQVVDRVWQECNMNRAQNKRKYSATSNGLCDEETAEKIACWDFVEATQ
RTNCNCSRHKNLKPRNSGQQGQAPPVGQQQQAAPKHKTNEKQDKGDKPQKRPLTPFHHRV
SISDDVAMEADSASQRLVMTAPDSQVRFSNIRTNDVAKTPQMHNAEMANSPQPPPLSPHP
CDVVDEGVAKAPSTPQSQHFYQMPTPDPLVPTKTMEDRLDGLSQPFPAQFPEVIEPTMYV
GTAVNLEEDEADTTWKYYKVPKKKDGEFLPPQLPNDKLRDDPVIPAGQENLTSVTELMVQ
CRKPLKVSDELVQKYQSKNQYLAAVATEADQEPEIDPYAFVDGDVEFLFPDSKKDRQNIE
REAGKKHKAEDGTSGVTVLSHEGEDAMSLFSPSVKQDAQRIAAHARTASTSLFHETDLVV
SYTDLDNLFNSDEDELTPGSKRTVNGADDKSNCKEAKAGNLDPLSCISTADLHKMYPTPP
SLEQHIMGFSPMNMNNKEYGSMDTTLGGTVLEGSSSSVGAQFRIEVDEGFCSPKPAEIKD
YSYVYKPENCQALVGCSMFAPLKTLPSQCLPPIKLPEECIYRQSWAVGKLDLLPPGPAMP
FIKDGDGSTMDQEYGPAYTPQTHTPFGMPPSSAPPSNSGAGILPSPSTPRFPTPRTPRTP
RTPRGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILS
ESVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNSS
GLFLEDELDILGRNTECGKEAEKRFEALRATSIEHGSGGLKEPEKLPDELILLLQDQCTN
LFSPFGAADQDSIPKVGAVSNLVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKT
TCLHHWSKRNVVDVSMQCSQDILRMLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKM
AGRGSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDVAYVVVCP
ENEALLNGAKSFFRDLTAIYESCRLGQHRPICKLLPDGIMRVGPTASKKLSEKLVTEWFS
QTANANNEAFSKLKLYAQVCRYELGPYLASQPLDNSLLSQINLVPPSSQPASALPPVTAN
TGNPNTPSSAPAAPTSSTITVTSNSAMSSAATTANSTLTTTAPSSSSANLGSGIPTSKPS
SFPPFSSMNNTTSASLPTQAATVQNGQTGGQQQQPTLQTAGMSGDATSAPAQPHPEVSES
TMDRDKVGVPTDGDSHAITYPPAIVVYIIDPFTYEKKDENSSSSSLWTLGLLRCFLEMVQ
VLPPNIKNIISVQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTL
TGFGPGLAMETALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYC
LSHDQRWLLASCTDLYGEQLETCIINIDVPNRARRKKGSARRLGLQKLWEWCLGLVQMSS
LPWRVVIGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLV
AMEPQGSFIIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASST
YTTENLDLAFNTNNDGADGMGIFDLLDTGDDLDPDIINILPASPTGSPVHSPGSHYPHGG
DMGKGQGTDRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLF
LKASLHLHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSC
LPIHFVVLNQLYNFIMNML
NT seq
6540 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctgcttcgtgccgaacggggccagcctggaggattgccattccaacctcttc
tgcctggctgatctaactgggattaaatggaagcgatatgtgtggcaaggtccaacatct
gcccccattctcttcccggtcacggaagaagaccctattttgagcagcttcagccgctgt
ctgaaggcagatgtactcagtgtttggcgccgagaccagaggccaggacgcagggagcta
tggatattttggtggggtgatgaccccaactttgctgaccttattcatcatgatctctca
gaagaggaagatggtgtttgggagaatggactttcttatgaatgtcgcactctgcttttc
aaagccgttcacaacctgttggagaggtgtctgatgaacaggaattttgtacgcattggg
aagtggtttgtgaagccttatgagaaagatgaaaaacctataaacaaaagcgagcacttg
tcctgctcattcaccttcttcttacatggagatagcaatgtttgcaccagtgtggagatc
agtcagcatcaacctgtgtacctgctcagtgaagaacacctcactctcgcccagcagtcg
aacagcccttttcaagttattctaagtcccttcggattaaatggcacgctcacagggcag
tcattcaagctttctgattcatcgacaaaaaagcttattggtgaatggaaacaattctat
cctgtcacatccaacttgaaggagggatctgaggaaaaacaggaagacatggattgggag
gatgattctttagctgctgttgaagtccttgttgctggtgtgcgaatggtatacccggca
tgcttcgttctagttccccagacagacatccctgcccctagtactgtaggggcatcgcac
tgttcaactacttgcttgggtgtccaccaagtgcctgcttccacaagagatcctgccatg
tcttcagtaactctgactccaccgacatccccagaggaagttcaaacagttgatgctcaa
tctgcccagaagtgggtgaagttctcttcagtttctgatggattcatctctgacagtacc
agccatcatggtggcaaaatacctagaaagctggccaaccaagtggtggacagagtttgg
caagaatgcaatatgaacagagcacagaacaagaggaagtattctgctacatcaaatggc
ttgtgtgatgaagagacagctgaaaagatagcatgctgggattttgttgaagccacgcag
aggacaaattgcaattgttcaaggcacaaaaatctcaaaccaagaaattcaggtcaacag
gggcaggcaccacctgtgggccaacaacagcaagcagctccaaagcacaagacaaatgag
aagcaagacaaaggggataagccacagaaacgccctttgactccttttcatcatcgtgta
tctatcagtgatgatgttgccatggaggcagattcagcgagtcagaggcttgtgatgact
gcaccagacagtcaagtgagattttcaaatatccgaactaatgatgtagcaaagactcct
cagatgcataatgctgaaatggcaaattcacctcagccaccaccacttagtcctcacccg
tgtgacgtagttgatgaaggggtagctaaagctccttctacgcctcagagtcaacatttc
taccagatgccaacaccagaccccttggttcccacaaaaacaatggaagacagactcgat
ggcttgtctcagccttttccagctcaatttcctgaagttatagagcctaccatgtatgtt
ggtactgcagtgaatttggaggaagatgaagctgatactacttggaagtattataaagtt
ccaaagaaaaaggatggggaattcttaccacctcagcttccaaatgacaagttgagagat
gatccagtaatacctgctggacaggaaaacctaacatcagttacagaattaatggtgcaa
tgtaggaaacctctaaaggtttcagatgaactggtgcaaaagtatcagagtaaaaaccaa
tacctagcagcagtagcgacggaagctgaccaggaacctgaaattgatccttatgccttt
gttgatggtgatgtggaatttttattccctgatagtaaaaaagataggcagaacattgag
agggaagctgggaagaaacacaaggctgaggatgggacatctggtgttacagttttatcc
catgaaggagaggatgctatgtctctatttagtccttctgtcaagcaagatgcccaacgt
attgctgctcatgctcgcactgcatcaactagcctattccatgaaacagacttagtggtc
tcttacactgaccttgacaatctcttcaattctgatgaagatgaactaacacctggatct
aaaagaacagtgaatggcgctgatgacaaatccaactgcaaagaggcaaaagcaggaaat
ctagacccactgtcatgcataagcactgcagatctccataaaatgtatccaactccacct
tcactggaacaacatattatgggattttctccaatgaacatgaataataaggaatatggc
agtatggacactacacttggaggaacagtacttgaagggagtagctcgagtgtgggagct
cagttcagaattgaagtagatgaggggttttgcagccccaaacctgctgaaataaaggat
tattcttatgtttataaacctgagaattgtcaagctttagtgggatgttccatgtttgca
ccactgaagacgcttcccagccagtgtcttcctcccatcaaactgccagaagaatgcatt
tatcgccagagttgggctgtgggaaagttggatttacttcctccaggacctgccatgcca
ttcatcaaagatggtgatggaagcactatggatcaagagtatggccctgcatacacacca
caaactcatactccatttgggatgccaccaagtagcgcacctcccagtaacagtggagct
ggaattctcccttctccttccacccctcgtttcccaactcccagaacaccaaggactcct
cgaacccctcgtggggctggtggacctgcaagtgcacagggttcagtcaaatatgagaac
tctgatttgtactcaccagcttccacaccatcaacatgtagaccgcttaattctgttgaa
cctgcaaccgtgccttccattccagaggcacacagtctttatgtgaatctcatcctctca
gagtctgtaatgaatctcttcaaagactgtaactttgacagctgctgcatatgtgtttgc
aatatgaacatcaaaggtgctgatgttggagtttacattcctgatccaacacaagaggcc
cagtatagatgtacctgtggtttcagtgctgttatgaatagaaaatttggcaacagttct
ggactgtttcttgaagatgaattggatattctaggacgtaatacagagtgtggcaaagaa
gcagaaaaacgctttgaagctctcagagctacttctattgagcatggcagtggaggactg
aaagaacctgagaagctgcctgatgagttaatactgctgctgcaggatcagtgcaccaac
ttgttctcaccgtttggagcagcagatcaagattccattcccaaagttggtgcagttagc
aacctggtacgtgtagaagaaagggattgttgcaatgactgctacttagccttggaacat
ggacggcagttcatggacaatatgtcaggagggaaagttgatgaagcacttgtgaaaact
acttgcttgcaccactggtcaaaaagaaatgttgtggatgtgagcatgcagtgttcccag
gacatcctccgcatgctcctctcgctccagcccgttcttcaggatgcaatccagaaaaag
cggacggtccgctcctggggtgtgcaggggcccctcacgtggcagcagttccacaagatg
gctggcagaggctcttacggaactgatgagtccccggaaccactgccaatcccaacattt
ttgttgggatacgattatgattttctggtgctgtctccatttgcattgccgtattgggag
aggctgatgctggaaccgtatggatctcaaagagatgttgcttatgttgtggtgtgccct
gagaatgaggctctgctgaatggagcaaaaagcttctttagggatctgactgcaatatat
gagtcatgtaggcttggtcagcacagacctatctgtaagttactgcctgatgggatcatg
cgagttggacctactgcttcaaagaaactttctgagaagctggtcacagagtggttctca
cagacagctaatgccaacaacgaagcgttttccaaactcaaactatatgctcaagtttgc
agatatgagctgggtccttatcttgcttctcagcctttggacaattctttactttcccaa
ataaatctggtccctccctccagccagccggcctctgctctgcccccagtgacagctaac
actggaaatcctaacactccgtcatctgctcctgcagctcccaccagtagtactattaca
gtgacatcaaacagtgccatgtcttctgcagctactacagctaattcgacgttgactacc
actgccccatcatcctcttctgccaacctaggcagtgggatcccaacaagcaagccttct
tcatttccaccttttagcagtatgaacaataccacttctgcctccctgcccactcaggct
gcaacagtccaaaatgggcaaacaggaggacagcagcaacagccaacactgcaaacagct
gggatgtctggagatgctacttcagcacctgcacagccccatccagaagtttctgaaagc
actatggatcgtgataaagttggagtccctacagatggagattcacatgctatcacctat
ccacctgcaattgtagtttacattatcgatccttttacgtatgaaaaaaaggatgagaac
agcagctcatctagtttatggacacttggacttctgcgctgctttttagagatggttcag
gttcttcctcctaacatcaagaatataatttctgtgcagattgtcccgtgtcagtacctt
ctccaacctgtgaaacatgaggaccggcagatttacactcagcatttaaaatctctggca
ttttcagcttttactcagtgtcggagacctcttccaacttccaccaatgtgaaaacatta
actggctttggcccaggtttagccatggaaacggctcttaagagccctgatagacctgag
tgtattcgactatacacccctccttttatactggctccagtaaaggacaagcaaacagaa
ctaggagaaactttcggagaagctggccagaagtataacgtgctttttgtaggctactgt
ttgtctcatgatcaacgatggcttcttgcatcttgtacagatctctacggagaacagtta
gaaacttgcataattaatattgatgtaccaaacagagctcgcaggaaaaagggttctgcc
cgcagacttggtcttcagaaactctgggaatggtgcttgggacttgtgcagatgagctct
ttgccatggagagttgtaataggccgcttaggaagaataggacatggggaattaaaagac
tggagttgtttgctgagtcgccgaaaccttcagtcccttagcaagagactaaaagacatg
tgcagaatgtgtggtatctctgctgcggactcccccagcattctcagtgcttgtttggtg
gcaatggaaccacaggggtccttcattattatgccagattctgtatcgaccggctctgta
tttggacgtagcaccactttaaacatgcagacatctcagctgaacaccccacaggacaca
tcatgcactcatatacttgtgtttcccacatctgcatctgtgcaagtagcatcgtcaact
tacaccactgaaaacttggatctggcctttaacacaaacaatgatggagcagatggaatg
ggaatctttgacttgttagacactggagatgatcttgatcctgatattataaatattctt
cctgcatcccctactggatcccctgtacattctccagggtcccactacccccatggaggt
gatatgggcaagggtcaaggtacagatcgattgctttcaacagaatctcacgatgaagta
acaaatatactgcaacagccattggcccttggctattttgtgtcaactgccaaagcaggt
ccattgcctgactggttttggtcagcgtgccctcaagcacaaaatcagtgtcccttgttt
cttaaggcctctttgcacctccacgtgccttcagtgcaatcagacgagctactccacagt
aaacactcccatccacttgattctaatcaaacttctgatgtgctcaggtttgttctggaa
cagtacaatgcactctcctggctaacctgtgatcctgcaacccaggacagacggtcatgt
ctcccaattcattttgtggtgctgaatcagttgtataactttatcatgaatatgctgtga
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