Strigops habroptila (Kakapo): 115602182
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Entry
115602182 CDS
T08851
Symbol
SORT1
Name
(RefSeq) sortilin isoform X1
KO
K12388
sortilin
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115602182 (SORT1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Mo-co_dimer
Motif
Other DBs
NCBI-GeneID:
115602182
NCBI-ProteinID:
XP_030328861
UniProt:
A0A672UPZ1
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Position
18:complement(6606193..6613364)
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AA seq
785 aa
AA seq
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MGARGAAVLTVLMAAAVAAAGPALGLRLRGRHRAPRGGTGALAAAAAAGGEACGGLRGVP
AALGNNTHQCVFDDLSSSVSLSWVGDSTGVIMSFGQSKLYRSEDYGKTFLDISSLINNTF
IRTEFGVAIGPGNSGKVILTGDVSGGSRGGRIFRSMDFARNFVQTDLPFQPLVQLSYSPR
DPDCLLALSTENGLWVSRDFGHKWALIHRAVCLAKWGADGTIFFTTFLNNSCKADLGFLE
LKKTSDFGSSFKVIGTRIYSFGLGGRFLFASVMTEKGTTRRIHVSLDQGESWNMAQLPSV
GHEQFYSILAANEDLVFMHVDEPGDTGFGTIYTSDDRGIVYSKSLERHLYTTTGGETDFT
NVTSLRGIYITSVLSEDNSIQSVITFDRGGQWVPLRKPKNTTCDSTARSKDECSLHIHAS
YSISQKLNVPMAPLSEPNAVGIVIAHGSVGGAISVMTPDVYISDDGGYTWARMLEGPHHY
SILDSGGLIVAVEHSSQPVNTIEFSTDEGQCWYRYVFSKEPIFFTGLASEPGARSMTVSV
WGFRGSFFFRKWVSYTIDFSELLSRSCEDKDYTIWLAHSSEPGEPGDGCILGYKEQYRRL
RKSSVCRNGHDYVVTKQPSVCPCTLQDFLCDFGYYRPENQSVCVEQPELKGHDLEFCLYG
RRELLRTSGYRKIPGDKCSGGESPAREETDMKKKCTSNLLSPGQLAAPRSPAAAVLAVGA
ALLLAAAGAVLLVKKYVCGGRFLVQRYSVLQQHAEANDVETIDVLGPPAPPKPGYHDDSD
EDLLE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgcgcggggcggcggtgctgaccgtgctcatggcggccgcggtggcggcggcg
gggcccgcgctggggctgcggctgcgggggcggcaccgggccccccgcggcggcaccggg
gcgctggcggcggcggcggcggcgggcggcgaggcctgcggcggcctgcgcggggtcccg
gccgccctcggcaacaacacgcaccagtgcgtcttcgacgacctcagcagctccgtgtcg
ctgtcctgggttggtgacagcactggggtgatcatgagcttcgggcaatccaaactgtac
cggagcgaggactatgggaaaaccttcctggacatctccagcctcatcaacaacaccttc
atccgcaccgagttcggtgtggccatcgggccgggcaactccgggaaggtgatcctgacg
ggggatgtctccggtgggagccgtgggggccgcatcttccgctccatggattttgccagg
aatttcgtccagacggatctgcccttccagccactggtgcagctcagctacagcccgcgg
gaccccgactgcctgctggcgctcagcaccgagaacgggctctgggtctccagggacttc
gggcacaagtgggccctgatccacagagccgtgtgcttggccaagtggggcgccgatggc
accatcttcttcaccaccttcctgaacaactcctgcaaagctgatctgggcttcctggag
ctcaagaaaacctcggacttcggctcctccttcaaggtcatcggcaccaggatctactcc
ttcgggctgggaggacgcttcctcttcgcctctgtcatgacagagaaggggaccacgagg
cgcatccacgtctccctggaccaaggggagagctggaacatggcccagctcccctctgtt
gggcacgagcagttttactccatcctggctgccaacgaggacctggtgttcatgcacgtg
gatgagccgggcgacacggggttcggcaccatctacacctcggacgaccgcggcatcgtc
tactccaagtccctggagcggcacctttacaccacgacgggcggagagaccgacttcacc
aacgtcacctccctgcggggcatctacatcaccagcgtcctctcggaggacaactccatc
cagtccgtgatcacgtttgaccgcggggggcagtgggtgccgctgcggaagcccaagaac
accacgtgcgactccacggccaggagcaaggacgagtgcagcctccacatccacgcgtcc
tacagcatctcccagaagctcaacgtgcccatggcgccgctctcggagcccaacgccgtc
ggcatcgtcatcgctcacggcagcgtggggggggccatctcggtgatgacccccgacgtg
tacatctccgacgacgggggctacacgtgggcgcggatgctggaggggccgcaccattac
tccatcctggactcgggcggcctcatcgtggccgtggagcacagcagccaacccgtcaac
accatcgagttctccacggacgaggggcagtgctggtaccggtacgtgttctccaaggag
cccatcttcttcacggggctggcgtcggagccgggcgcccgctccatgaccgtcagcgtg
tggggcttccgcggcagcttcttcttccgcaagtgggtctcctacaccatcgacttcagc
gagctgctcagcaggagctgtgaggacaaggactacaccatctggctggcgcactccagc
gagcccggcgagcccggcgacggctgcatcctgggctacaaggagcagtaccggcggctg
cgcaagtcctcggtgtgccgcaacggccacgactacgtggtcaccaaacagccgtcggtg
tgcccctgcacgctgcaggacttcctctgtgatttcggctactaccgcccggagaaccag
tccgtgtgcgtggagcagccagagctgaagggccacgacctggaattctgcctctacggc
cgccgggagctgctcaggaccagcgggtaccggaagatccccggggataagtgctccggg
ggggagagcccggcacgggaggagacggacatgaagaagaaatgcaccagcaacctgctg
agccccggccagctggccgccccccgcagccccgctgccgccgtgctggccgtgggggcc
gcgctgctcctcgccgcggccggcgccgtgctcctggtcaagaaatacgtgtgtgggggc
aggttcctggtgcagcgctactcggtgctgcagcagcacgcggaggccaacgacgtggag
accatcgacgtgctgggcccccccgcgccccccaagcccggctaccacgatgactccgac
gaggatctcttggaatag
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