Strigops habroptila (Kakapo): 115602213
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Entry
115602213 CDS
T08851
Name
(RefSeq) bile acid receptor-like
KO
K08538
farnesoid X receptor beta
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115602213
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
shab03310
]
115602213
Transcription factors [BR:
shab03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115602213
Nuclear receptors [BR:
shab03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
115602213
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115602213
NCBI-ProteinID:
XP_030328942
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Position
18:complement(149674..162632)
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AA seq
514 aa
AA seq
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MKQCSWEQNMANTFVTVPDGYCLPEPIQYYDVLPEHINYQLQDTDFQTAPCCQYSTVQIP
PPVLQSQPPHSQYSTYSLDSQYSDGQCVISSCELSKPPFMTPHMDDGGYQGLKRPRLNHS
SLRLKGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYRCKNGGHCEMDMYMR
RKCQECRLKKCKAVGMLAECLLTEVQCKSKRLRKNFKQKSSFLYNIKLEDERLNSKHVSS
TTRSGKIPEKMELTPGEHQLLDHIVAAHQKYTIPLEEAKKFLQETASPEESFLHLSETAV
VHVQVLVDFTKRLPGFESLASEDQIALLKGSTVEAMFLRSAQIYNQRISECQASTSESHV
RLSDHGTYCHIQDLDRNNIYSMAMCHNEESPTSTTTTGITEEFITALFYFYRSMGELKVT
ETEYALLVATTVFFSDRPLLRNKRHVEELQEPLLGLLYKYSKIHHPEDPQHFARLIGRLT
ELRTLNHTHAEVLVTRRTKDPRLTPLLCEIWDLH
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtgcagttgggagcagaacatggcaaatacatttgtcactgtaccggatggg
tattgcctgcctgagcccatccagtattatgatgttctgccagagcacatcaactatcag
ctgcaagacaccgattttcagactgctccttgttgccaatactcaacagttcaaattcct
cctccagtattacagtcccaacctccccattcccagtacagcacatacagcctggactct
cagtacagcgatgggcaatgtgtcatcagcagctgtgaattaagcaaaccccctttcatg
actccccatatggatgatggtggataccaaggattaaaacggccaagattaaaccactct
tctttgagactgaagggacaggaggagctgtgtgtggtgtgtggtgacaaggcctcgggc
tatcactacaatgcacttacctgtgaaggctgtaaaggcttctttcgacgcagcataacc
aaaaatgcagtgtatcgatgcaagaatggtggtcactgtgaaatggacatgtacatgcga
aggaagtgtcaggaatgtcgcctgaagaagtgtaaagctgtgggaatgctagcagaatgt
ttgctgactgaagtacagtgcaagtcaaagcggctcaggaagaatttcaaacagaagagc
agttttctctacaatataaagctggaagatgagaggctgaatagtaaacatgtatcatct
acaacaagatctggaaaaatcccagagaagatggaacttactccaggggagcatcagctt
ctggaccacattgtagcagcacaccaaaaatacacaattcccctggaggaagcaaagaag
tttctacaagaaactgcaagtcctgaggaaagttttctccatctctccgagacagcagtt
gtccacgtacaagtgttagtggatttcacaaaaagacttccaggatttgaaagtttagct
agtgaagatcagattgcgctgctaaaagggtcaacagttgaggcgatgtttttgcgttca
gcccaaatatacaaccaaagaatcagtgaatgccaagcctcaacaagtgaaagtcacgta
aggctttctgatcatgggacatactgtcacattcaagatcttgatagaaacaacatttac
tccatggcaatgtgtcacaatgaagagagtccaacttccactactaccacaggtataacc
gaggagtttattaccgcgctgttttacttctacagaagcatgggggaactgaaagtgacc
gagaccgaatacgccctgctcgtagcaacgacggtgtttttttcagaccgcccgctcctc
aggaacaagcggcacgtcgaagagctgcaggagccgctcctgggcctcctctacaagtac
tccaagatccatcatcccgaggacccccagcatttcgcccgcctgatcgggcgcctcaca
gaactgcgcaccctcaaccatacccacgcggaggtgctggtgacgcggagaaccaaggac
ccgcggctgaccccgctgctttgcgagatctgggacctgcactag
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