Strigops habroptila (Kakapo): 115602220
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Entry
115602220 CDS
T08851
Symbol
SMPD2
Name
(RefSeq) sphingomyelin phosphodiesterase 2 isoform X1
KO
K12351
sphingomyelin phosphodiesterase 2 [EC:
3.1.4.12
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab00600
Sphingolipid metabolism
shab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115602220 (SMPD2)
Enzymes [BR:
shab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
115602220 (SMPD2)
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GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
115602220
NCBI-ProteinID:
XP_030328958
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Position
18:4551113..4556483
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AA seq
412 aa
AA seq
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MEGDPTLQLRVFDLNCWAIRYLSKRRQERIQLIGDMLRQERFDLVLLQEVRGAKPRAVHG
AVPELCHVLGICHMETPVLGVIGSGLCVFSRFTILDTLLYQYSLNGYPYMLQHGDWFCGK
SVGLVIIKISGIIFNVYVTHLHAEYCREKDAYLPHRLVQAWELAQFIRHTSKAADVVLLG
GDLNMHPEDVGIRLLRGWTGLRDAFAEAKHFEGCKDGCTLIPSNCFTIKTELLPFPLGIR
IDYILYKAISSFTVKCEELRTTTGSAPGMDIPFSDHEAVMATLHIRRQGEAASATLSTAE
LALVDVVTEARTEVGVGLRAAQRQRYSTGRLAVLALLLLLLQAAAVLGTLAGLGGQPFPK
LSFSLLAFLAIGILLLATGLHLFHTIEVKMLQGTEEQMRMVLRALQERPSDG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagggagatcccaccctgcagctccgcgtcttcgacctgaactgctgggccatccgc
tacctgagcaaacggcgacaggagcgcatccagctcatcggggacatgctgcgccaggag
cgcttcgacctggtccttctccaggaggtgagaggtgccaagcccagggctgtccatggg
gctgtgccagagctgtgccatgtccttggtatttgccacatggagacaccagtgctcggc
gtgatcggcagcggcctctgcgtcttctccaggttcaccatcctggacactctcctctac
cagtactcactgaatgggtacccctacatgctccagcacggggactggttctgcggcaag
tccgtcggcctcgtcatcattaagatctctgggatcatcttcaatgtctacgtcacccat
ctacatgcggaatactgccgggagaaggacgcctacctgccccaccgcctggtgcaggcc
tgggagctggcccagttcatccgacacacctcaaaggcagctgacgtggtgctgctgggg
ggggacctgaacatgcaccctgaggacgtgggcatccggctgctgcgtggctggacgggg
ctgcgggatgcctttgccgaggccaagcactttgagggctgtaaggatggctgcaccctc
atccccagcaactgcttcaccatcaagacagagctgctgcccttcccgctcggcatccgc
attgactacatcctctacaaggccatctccagcttcacggtgaagtgtgaagagctaagg
accaccacggggtccgctccaggcatggacatccccttctcagaccatgaagccgtgatg
gcaacgctgcacatcaggaggcagggagaggctgcgagtgccaccctcagcacagctgag
ctggcactggtggacgtggtgacagaggcacggacagaggttggtgtggggctgcgggca
gcgcagcggcagcgctactccacgggcaggctggcggtgctggcgctgctgctgctgctg
ctgcaggcagcggctgtgctgggcacgctggcggggctgggcgggcagcccttccccaag
ctctccttctccctgctggccttccttgccatcggcatcctcctcctcgccactggcctc
cacctcttccacaccatcgaggtgaagatgctgcagggcaccgaggagcagatgcggatg
gtgctgcgggcgctgcaggagcggcccagcgatggctga
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