Strigops habroptila (Kakapo): 115602782
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Entry
115602782 CDS
T08851
Symbol
BCAN
Name
(RefSeq) LOW QUALITY PROTEIN: brevican core protein
KO
K06795
brevican
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
shab00535
]
115602782 (BCAN)
00536 Glycosaminoglycan binding proteins [BR:
shab00536
]
115602782 (BCAN)
04091 Lectins [BR:
shab04091
]
115602782 (BCAN)
Proteoglycans [BR:
shab00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
115602782 (BCAN)
Glycosaminoglycan binding proteins [BR:
shab00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
115602782 (BCAN)
Lectins [BR:
shab04091
]
C-Type lectins
Lecticans
115602782 (BCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
hEGF
ig
Ig_3
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
115602782
NCBI-ProteinID:
XP_030330045
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All DBs
Position
22:complement(375519..389726)
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AA seq
931 aa
AA seq
DB search
MEQGQRMPPALPLLLLWVFAPAVVPEVFGTGDGAEDLKALQVSIPRHPALDAVLAGDITI
PCLITYLGPQPTSSSTAGRRAVLGTPRVKWTFISEGREVEILVARGDRVKVSEDYRFRAS
LPIFHQRYTNASLLLTELRPNDSGIYRCDVQHGIEDGHDILNLRVKGVVFHYREGSMRYA
YTFAEAQEACAKIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIHTPREACYGDMN
GFPGVRNYGVVDPEDMYDVYCYAEDLPGEIFLETAPARFTLQEAAARCRARGAALASTGQ
LYAAWSAGLDACSPGWLADGSVRYPIVTPRERCGGALPGVKTIFVFRNQTGFPDAQSRYD
AYCFREGTNSFPEAPGSSEGLQEIVTVAEKLEELQLPKAQVEIESRGAIYAVPFFMDDDL
GQPSPAPEDAPGTGARHPPIDTSMSSEEEQGAAPGSTFEGRDPSQPMEQDGAISLQMLSI
APRVGAEGPTGAPSVLGAAEGDPEPPEGFPRPPSPTHHPEHPRDAVGRSAHTVSPGAPGH
RLPSPTSAASATSTDSREHGGTPSGGVSTPVPVAEDVELSGDVVESPGVSPLPAAPVRPQ
EEGEEPSGALWLPSPVAPADGGTVPAAEVTVVTPWHTEGPGGSSSTTAMGGEEAPPGTDH
GMPAASSEEEEEEEEEEPPAPSAATVEGFLAAVPGEPGGCIPNPCLNGGTCTEDDGPVSC
LCLPGYGGTSCERPLRQCSPGWDSFQGACYKHFSTRRSWEDAEGQCRHYGGHLATILTPE
EQDFINDQYREYQWIGLNDRTIEGDFQWSDGSPLLYENWHHGXPDSYFLSGXNCVVIVWH
DGGQWSDVPCNYHLPTTCKMGLVQCGPPPAISNARAFGKPKQRYEIGSTARYRCRPGFLP
RRSPLLRCRDDGMWDPPQLICRPGLAQPPGD
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagggcagaggatgcccccagccctcccgctgctgctgctctgggtgtttgcc
cccgcggtggtcccggaggtgtttggcaccggagatggcgcagaggacctcaaggctctg
caggtctccatcccacggcacccagccctggatgctgtgctggcgggcgacatcaccatc
ccctgcctcatcacctacctcggcccccagcccaccagcagcagcaccgccgggcgccgc
gcggtgctggggaccccccgggtcaagtggaccttcatctccgagggccgggaggtggag
atcctggtagcgcgcggggaccgggtgaaggtgagtgaggactatcggttccgcgcctcc
ctgcccatcttccaccagcgctacaccaacgcgtccctgctgctcaccgagctgcggccc
aacgactcgggcatctaccgctgcgacgtgcagcacggcatcgaggacggccacgacatc
ctcaacctcagagtcaaaggggtggtgtttcactaccgggagggctccatgcgttatgcc
tacaccttcgccgaggcgcaggaagcctgtgccaagatcggggcccacatcgccaccccc
gagcagctctatgctgcctacctcggcggctacgagcagtgcgatgctggctggctctcg
gaccagaccgtcaggtatcccatccacacaccccgtgaagcctgttatggagacatgaac
ggcttccccggggtgaggaactacggggtggtggacccggaggacatgtatgatgtgtac
tgctacgctgaggacctcccaggggagatctttttggagacggcccccgcgcggttcacg
ctgcaggaggcggcggcgcggtgccgggcgcggggcgcggcgctcgccagcaccgggcag
ctctacgcggcgtggagcgcggggctggacgcctgcagccccggctggttggccgacggc
agcgtccgttaccccatcgtcaccccgcgggagcgctgcggcggggctctgcccggcgtc
aaaaccatcttcgtgttccgcaaccagacgggtttccccgatgcccagagcagatacgat
gcctattgcttccgagaagggacaaactctttccctgaggctccaggaagctccgagggc
ctccaggagattgttacagtggcagaaaagctggaggagctgcagcttcccaaagcgcaa
gtggagattgagtcgcgaggggctatttacgccgtccctttctttatggacgatgatctg
ggacagccgagcccggcccccgaagacgcaccagggacaggggcccggcaccccccaata
gatacctccatgtcctcagaggaggagcagggagcagccccgggcagcacgtttgaaggg
cgagaccccagccagcccatggagcaggatggagccatcagcttgcagatgctctccata
gccccgcgggtgggcgcagagggacccaccggtgccccgtccgtgctgggggccgcagaa
ggtgacccagagcctcccgaggggttcccccggccgcccagccccacacatcaccccgag
cacccccgggatgctgtggggcgctcagcccacaccgtcagccccggggcaccggggcac
cggttgccatcgccgaccagcgccgcttctgccacctcgacagacagccgagagcacggc
gggaccccctccggcggggtgagcacccccgtccctgttgctgaagacgtggagctctcg
ggagacgtggtggagagccccggagtgtccccgctgcccgcggcgcccgtgcggccgcag
gaggagggagaggagccgtcgggggccctgtggctcccatcgcccgtggccccggcggac
gggggcaccgtccctgcggcggaggtgacagtggtcaccccgtggcacacggaggggcct
ggcggcagcagcagcactacggccatgggaggcgaggaggctccgcctggcactgaccat
gggatgcctgcagcatcttcggaagaggaggaggaagaggaggaggaggagccgcccgct
ccctccgctgcaaccgtggagggtttccttgcagccgtgcccggagaaccaggtggctgc
atccccaacccctgcctgaatggagggacctgcacggaggatgatggtcctgtctcctgc
ctctgcctgcctggctatggaggcaccagctgcgaaagaccactgaggcagtgcagccct
ggctgggacagcttccagggagcctgctacaagcacttctccactcggaggagctgggag
gatgcggaggggcagtgcaggcattacgggggacacttggccaccatcctgacccctgag
gagcaggacttcatcaatgaccagtacagagaataccagtggatcggcttgaacgaccgg
accatcgagggggatttccagtggtccgacgggagccccttgctctatgagaactggcat
cacggcnagcccgacagctacttcctcagtggangaaactgtgtggtcatcgtgtggcac
gacgggggccagtggagcgacgtgccctgcaactaccaccttcctaccacctgcaaaatg
gggctggtgcagtgcgggccgccccccgccatcagcaacgcccgtgccttcggcaaacca
aagcagcgctatgaaatcggctccacggcgcggtaccgctgccgccccggcttcctcccg
cgccgctcgcccctgctccggtgccgggacgacgggatgtgggacccgccgcagctcatc
tgccgccccggcctggctcagccccccggtgactga
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