Strigops habroptila (Kakapo): 115602835
Help
Entry
115602835 CDS
T08851
Symbol
HCFC1
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1
KO
K14966
host cell factor 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03083
Polycomb repressive complex
shab04980
Cobalamin transport and metabolism
shab05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115602835 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
115602835 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115602835 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shab01009
]
115602835 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shab03036
]
115602835 (HCFC1)
03029 Mitochondrial biogenesis [BR:
shab03029
]
115602835 (HCFC1)
Protein phosphatases and associated proteins [BR:
shab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115602835 (HCFC1)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
115602835 (HCFC1)
HMT complexes
COMPASS/SET1 complex
115602835 (HCFC1)
MLL-HCF complex
115602835 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115602835 (HCFC1)
Mitochondrial biogenesis [BR:
shab03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
115602835 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
115602835
NCBI-ProteinID:
XP_030330123
LinkDB
All DBs
Position
Unknown
AA seq
1946 aa
AA seq
DB search
MAAPGGGGSPPRAAAAPPALQPRWKRVLGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGI
VDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQA
SRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYI
LELRAGSGVLSWDIPITYGVLPPPRESHTAVVYTERAARRSRLVIYGGMSGCRLGDLWTL
DIETLTWNKPSVSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNT
LACLNLDSMAWEPIVMDTLEDNVPRARAGHCAVAIATRLYIWSGRDGYRKAWNNQVCCKD
LWYLETERPPAPARVQLVRANTTSLEVSWGAVPTADSYLLQLQKYELPAAASPAPAPVPS
VPANPPKSPAPAAAAPGPAAPPPQPVVPPVGLTLLPPAPAAAPPAPAPTTAAAGAASAAP
PGGALQVVPAATPPAAGSAAAAAGGGAAAGRAAGVPAVLKVTGPPAAAAGTPLVTVRSAG
PPGKAPVTVTSLPGVRMVVPGQSPQGTVLGSSPQLTGMAALAAAAAATQKIPPAAPAVLS
VPPGATIVKTVAVTPGTPSLPPSVKVASAPVMVTNPATRMLKSAAAQVGTSGGAAATNPP
PARPIITVHKSGAVTVAQHQAQVVTTVVGGVTKTITLVKSPISVPGGSALISNLGKVMSV
VQTKPVQSSAVTGQASTGPVTQIIQTKGPLPAGTILKLVTSGDGKPTTLLSTSQAGAGAA
KPTLLGISSVSPSTTKPGTTTIIKTIPMSAIITQAGATGVTSSPGIKSPITIITTKVMTS
GTGTPAKIITAVPKLASGHGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVK
PTVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGHSATASLATPITTLGTIATLSSQVLNP
AAITVSAAQSTVTATGALGTPTITMQPMAQPTQVTLITAPGGGVEAQPVPDLPVSILASP
TAEQPAPAGTEPDPGTVTLVCSNPPCETHETGTTNTATTTMATGPCSNPPCETHETGTTN
TATTTMATGPCSNPPCETHETGTTNTATTTMATGPCSNPPCETHETGTTNTVTTTASRLC
SNPPCETHETGTTNTATTTMATGPCSNPPCEMGTTTTATTSTTMVTASQPCSNPPCETHE
TGTTNTVTTTASRLCSNPPCETHETGTTNTATTTMATGPCSNPPCETHETGTTNTVTTTA
SRLCSNPPCETHETGTTNTATTTMATASQPCSNPPCETHETGTTTTATTTTVAPGPCSNP
PCEVHNTGTTNTATTTMATADNDRGAPPGCSNPPCETHETGTTPTATTVTATIGTNPGDT
GTAEGGTHTHNPPQGSPPQRPPMDKGSRSPPPPRVRGPPPGTPSPGPSTAGTPQPRAVTN
VTAATPVPAPALPSISSLTEPPPAPPDPPSTATAAAAALPPELMAEAPLGAAGGAAPALV
VTGLTPEELAVTAAAEAAAAAAATEEAQAQAQAQALAIQAVLQAAQHAVMGTAEPLDSSA
EPGGAPPELGVPEGPGGPIPIVLTQQDLAALVQQQQQQQQLEAAPPGTPPAPAPPPAPPQ
LPTEALAPADSLNDPPGTDSNGLAEVGAASGAPGDGLAPPSAFVPPPPVVGTSPAKLQAA
AALAEVANGIESGPAKPEPPPPKALLKKENQWFDVGVIKGTSMMVTHYFLPPEDAPPPDD
EAGGVPDHSQLRRQELQPGTAYKFRVAGVNVCGRGAFSELAAFKTCLPGYPGAPCAIRIS
KSPDGAHLTWEPPSVTSGRILEYSVYLAIAGGAGGAAEPRGGSGSGSGAAGGGPAPLAFM
RVYCGPSPSCLVPAGSLATAHIDHSTKPAIIFRIAARNDKGYGPATQVRWLQESSKDGAG
AKPASKRPLSSPDLKSAPKKPKADGQ
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccgggcggggggggctcccccccgcgcgccgccgcggccccccccgcgctg
cagccgcgctggaagcgggtcctgggctggtcggggccggtgccgcggccgcgccacggg
caccgcgccgtggccatcaaggagctcatcgtggtgttcggcggcggcaacgagggcatc
gtggatgagctgcacgtctacaacaccgccaccaaccaatggttcatcccggccgtgcgc
ggggacatccctcccggctgcgccgcctacggcttcgtgtgcgacgggacgcggctgctc
gtgttcggcggcatggtggagtacggcaagtacagcaacgacctctacgagctgcaggcg
agccggtgggagtggaagcggctgaaggcgaagacccccaagaacgggccccccccgtgc
ccccgcctgggccacagcttctccctggtgggcaacaagtgctacctctttggggggctg
gccaacgacagcgaggaccccaaaaacaacatcccccggtacctgaacgacctgtacatc
ctggagctgcgggcgggctcgggggtgctgagctgggacatccccatcacgtacggggtg
ctgccgccgccgcgcgagtcgcacacggccgtggtgtacacggagcgcgccgcgcgccgc
tcccgcctcgtcatctacggcggcatgagcggctgccgcctcggcgacctctggacgctc
gacatcgagacgctgacgtggaacaagcccagcgtgagcggggtggccccgttgccgcgc
agcctccactcggccaccaccatcggcaacaagatgtacgtgttcggggggtgggtgccc
ctcgtcatggatgacgtgaaggtggcgacgcacgagaaggagtggaagtgcaccaacacg
ctggcctgcctcaacctggactcgatggcgtgggagcccatcgtgatggacacgctggag
gacaacgtgccgcgggcgcgcgccgggcactgcgccgtggccatcgccacccgcctctac
atctggagcgggcgcgacggctaccgcaaggcctggaacaaccaggtgtgctgcaaggac
ctctggtacctcgagaccgagcgcccccctgcgcccgcgcgggtgcagctggtccgcgcc
aacacgacgtctctggaggtgagctggggcgcggtgcccacggccgactcctacctgctg
cagctgcagaagtacgagctgcccgcggccgcgtcccccgcgcccgcacccgtgccctcc
gtgcccgccaacccgcccaagagccccgcgcccgccgccgccgcgcccggccccgccgcg
ccccccccgcagcccgtggttccgcccgtggggctcacgctgctgccgcccgcgcccgcc
gcggcgccgcccgcgccggcgcccaccactgctgcggcgggggcggcctctgcggcgccc
cccggaggggctctgcaagtggtaccggccgccaccccacccgccgccggcagcgccgcc
gctgctgcgggggggggagcggccgcgggaagagcggccggggtgccggcggtgctgaag
gtgacgggcccccccgcggcggcggccgggacccccctggtgacggtgcgctcggccggg
ccccccggcaaggccccggtgaccgtcacgtccctgcccggcgtcaggatggtggtgccg
ggccagagcccccagggcacggtgctgggcagctccccgcagctgacgggcatggctgcc
ctggcggccgccgccgccgccacgcagaagatcccgcccgcggcgcccgcggtgctgagc
gtgccccccggcgccaccatcgtcaagacggtggccgtgacccccggcaccccctcgctg
ccccccagcgtcaaggtggcctcggcccccgtcatggtgaccaacccggccacgcggatg
ctgaagtcggcggcggcgcaggtggggacgtcggggggggccgcggccaccaaccccccc
ccggcgcggcccatcatcacggtgcacaagtcgggcgcggtgacggtggcgcagcaccag
gcgcaggtggtgaccacggtcgtggggggggtcaccaagaccatcaccctggtcaagagc
cccatctccgtgccggggggcagcgccctgatctccaacctgggcaaggtgatgtccgtg
gtgcagacgaagccggtgcagagctcggccgtcaccgggcaggcgtccaccgggcccgtc
acccagatcatacagaccaagggcccgctgccggcggggaccatcctgaagctggtgacg
tcgggggacgggaagcccacgacgctgctgagcacgagccaggcgggcgccggcgcggcc
aagcccacgctgctgggcatcagcagcgtgtcccccagcaccaccaagcccggcaccacc
accatcatcaagaccatccccatgtcggccatcatcacccaggccggggccacgggtgtc
accagcagccccggtatcaagtcccccatcaccatcatcaccaccaaggtgatgacttca
ggcaccgggaccccggccaagatcatcaccgctgtccccaagctggccagcgggcacggc
cagcaaggggtgacacaggttgtcctcaagggcgccccggggcagccgggcaccatcctg
cgcacggtccccatggggggggtccgcctggtgacacccgtcaccgtctctgccgtcaag
cccacggtcaccacgctggtggtgaagggcaccaccggtgtcaccacgctgggcacggtg
acggggacggtgtccaccagcctggccggcgcgggcgggcacagcgccacggcgtctctc
gccacccccatcacgacgctggggactatcgcgacgctgtcgagccaggtgctcaacccc
gccgccatcaccgtgtccgcggcgcagagcacggtgacggccaccggcgcgctcggcacc
cccaccatcaccatgcagcccatggcccagcccacccaagtgacgctgatcacggccccc
ggggggggggttgaggcgcagccggtgcccgacctgcccgtgtccatcctggcgtcaccc
acggccgagcaaccggcacccgccggcaccgagcccgaccccggcaccgtcaccctcgtg
tgctccaaccccccctgcgagacccatgagaccggcaccaccaacacggccaccaccacc
atggccacggggccctgctctaaccctccttgtgagacccacgagacggggacaaccaac
acggccaccaccaccatggccacgggaccctgctctaaccctccatgtgagacccatgag
accggcaccaccaacacggccaccaccaccatggccacgggaccctgctctaaccctcca
tgtgagacccatgagactggtaccaccaacaccgtgaccaccacagcgtcccggctctgc
tccaaccctccttgtgagacccacgagacggggacaaccaacacggccaccaccaccatg
gccacggggccctgctccaaccctccctgtgagatgggaacgaccaccacggccaccacc
agcaccaccatggtcacggcgtcacaaccatgttccaacccaccctgtgagacccatgag
accggcaccaccaacaccgtgaccaccacagcgtcccggctctgctccaaccctccatgt
gagacccatgagacggggacaaccaacacggccaccaccaccatggccacgggaccctgc
tccaaccctccttgtgagacccacgagacggggacaaccaacaccgtgaccaccacagcg
tcccggctctgctccaaccctccatgtgagacccatgagaccggcaccaccaacacggcc
accaccaccatggccaccgcgtcccagccctgctccaaccccccctgcgagacccacgag
acgggcaccaccaccacggccaccaccaccacggtggcgccggggccctgctccaacccc
ccctgcgaggtgcacaacaccggcaccaccaacacggccaccaccaccatggccaccgct
gacaatgaccgaggggccccccccggctgctccaaccccccctgtgagacccatgagacg
gggacgacccccacggccaccacggtcaccgccaccatcggcaccaacccaggtgacacc
ggcaccgcggagggggggacacacacacacaaccccccacaggggagccccccccagcgg
ccgccaatggacaaggggagccggagcccccccccgccccgggtgaggggcccccccccc
ggcacccccagccccgggcccagcaccgcggggaccccccagccccgcgccgtcaccaac
gtcaccgcggccacaccggtgccagcgcccgccctgccgagcatctcctcgctgacggag
ccccccccggcacccccggacccccccagcaccgccacggcggcggcggcggcgctgccc
ccggagctgatggcggaggcgccgctgggggccgcggggggggcggcgccggcgctggtg
gtcaccgggctcacccccgaggagctggcggtgacggcggcggcggaggcggcggcggcg
gccgcggccaccgaggaggcgcaggcgcaggcccaggcgcaggcgctcgccatccaggcc
gtgctgcaggccgcgcagcacgccgtcatgggcacggcagagcccctggacagcagcgcg
gagccggggggggccccccctgagctgggggtgcccgaggggccgggggggcccatcccc
atcgtgctgactcagcaggacctggcggcgctggtgcagcagcagcagcagcagcagcag
ctcgaggccgccccccccggcacccccccggcccctgcgccccccccggcccccccccag
ctccccaccgaggccttggcccccgctgacagcctcaacgacccccccggcaccgacagc
aacgggctggccgaggtgggggccgcgagcggagcccccggcgatggcctggcccccccc
agcgccttcgtgccccccccgcccgtggtgggcaccagcccggccaagctgcaggcggcc
gcagccctggcggaggtggccaatggcatcgagagcggccccgcgaagccggagccgccc
cccccgaaggcgctgctcaagaaggagaaccaatggttcgacgtcggcgtcatcaaaggc
acctccatgatggtgacacactacttcctgccccccgaggacgcgcccccccccgacgac
gaggccgggggggtcccggaccattcccagctccggcgccaggagctgcagccgggcacc
gcctacaagttccgcgtggccggggtgaacgtctgcggccgcggcgccttctccgagctg
gcggccttcaaaacctgcctgcccggctaccccggcgcgccctgcgccatccgcatcagc
aagagcccggacggggcgcacctcacgtgggagccgccgtcggtgacgtccgggcgcatc
ctggagtactcggtgtacctggcgatcgcggggggcgcggggggcgcggccgagccgcgg
gggggctccggctccggctccggcgccgcgggggggggcccggcccctctcgccttcatg
cgggtctattgcgggcccagcccctcctgcctggtccccgccggcagcttggccacggcg
cacatcgaccacagcaccaaacccgccatcatcttccgcatcgccgcccgcaacgacaag
ggctacgggcccgccacgcaggtgcggtggctgcaggagtccagcaaggacggagccggg
gccaaacccgccagcaagcgcccactgtcttcccctgacctgaaatccgctccaaagaag
ccgaaggccgacgggcagtga
DBGET
integrated database retrieval system
