Strigops habroptila (Kakapo): 115603087
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Entry
115603087 CDS
T08851
Symbol
MED12
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12 isoform X1
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115603087 (MED12)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
115603087 (MED12)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
115603087
NCBI-ProteinID:
XP_030330541
UniProt:
A0A672V4L0
LinkDB
All DBs
Position
9:44090118..44128704
Genome browser
AA seq
2162 aa
AA seq
DB search
MAAFGVLSYEHRPLKRPRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSAK
NVNFNPAKISSNFSSIIAEKLRCNTLPDTGRRKPQVNQKDNFWLVTARSQSAINNWFTDL
AGTKPLTHLAKKVPIFSKKEEVFGYLAKYTVPVMRAAWLIKMTCAYYAAITETKVKKRHV
IDPFIEWTQIITKYLSEQLQKIAEFYRQLPGQGCGSPSGPMPQEVEQALKQWDYNEKLAM
FMFQDGMLDRHEFLTWVLECFEKIRSGEDEFLKMLLPLLLRYSGEFVQSAYLSRRLAYFC
TRRLAMQLDGAGGHPPHILSAQTGNALPSTPTPQPAAGNPPPSPFSDLLLCPQHRPVVYG
LSCILQSIILCCPSALVWHYSLTDSRIKTGSPLDHLPIAPSNLPMPGGNSTFTQQVRAKL
REIEQQIKERGQAVEVRWSFDKCQETTAGFTIGRVLHTLEVLDSHSFERSDFSNSLDSLY
NRIFGLGPTKDSHEISPDDDAVVALLCEWAVSYKRSGRHRAMVVAKLLEKRQAEIEAERC
GDSEVVDEKGSISSGSLSAASAPVFQDVLMQFLDTQAPMLTDPGKENEKVEFFNLVLLFC
ELIRHDVFSHNIYMCTLISRGDLAMDSHGPRPPSPFDDPAEEHDRKETEGNSGIKLEDTG
LSEPIDIDHNSSMLFDDMEKTDFSMFSPPMHCESKASPSPEKPDPEKEAKPLLKDKSVEG
MLASLYDQPRHIQYATHFPIPQEESCSHECNQRLVVLFGVGKQRDDARHTIKKITKDILK
VLNRKSTAETGGEEGQKRKKSKPEAFPTAEDIFAKFQHLSHFDQHQVTSQVSRNVLEQIT
SFALGMSYHLPLVQHVQFIFDLMEYSLNISGLIDFAIQLLNELSVVEAELLLKSSDLVGS
YTTSLCLCIVAVLRHYHSCLILNQDQMAQVFEGLCGVVKHGMNRSDGSSAERCILAYLYD
LYTSCSHLKSKFGELFSDFCSKVKNTIYCNVEPSDSNMLWEPEFMIDTIENPSAHNFTYT
NLGKSLNENPANRYSFVCNALMHVCVGHHDPDRVNDIAILCAELTGYCKSLSAEWLGVLK
ALCCSSNNGTCGFNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLIRCAAIPSLLN
AACSEQDSEPGARLTCRILLHLFKTPQLNPCQQDGNKPTVGIRSSCDRHLLAASQNRIVD
GAVFAVLKAVFVLGDAELKGSGFSHLGGVDDLMDDELGTRKASGRVVTVETASLDIYAKY
VLRSICQQEWVGERCLKSLCEDSNDLQDPVLSSTQAQRLMQLICYPHRLLDNEEGENPQR
QRIKRILQNLDQWTMRQSSLELQLMIKQTTNNEMNSLLENIAKATIEVFQQSAETSSASC
AGNGVNNISSSASATPASNKSKPILSSLERSGVWLVAPLIAKLPTSVQGHVLKAAGEELE
KGQHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQVQQIVT
NWREDQYQDDCKAKQLMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLDIISSGTVDM
QSNNELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKLRKELGDRQSDSL
EKVRQLLPLPKQTRDVITCEPQGSLIDTKGNKIAGFDSIFKKEGLQVSTKQKISPWDLFE
GLKHSAPLSWGWFGTVRVDRKVSRFEEQQRLLLYHTHLKPKPRSYYLEPLPLPPEEEEPP
TPVALEPEKKAAEPAKADKTSSNPATSTEERKKKQSKTKKRNQSASKTEDFVLGPSRGVS
YGVGMPTDLLHHQSGSTMSRLAYGQSPVGLYAQNQPLPAGGPRLDTSYRPVRMPLGKLVQ
SRPPYSGVLPPGMGSMMGIDPSYKPAVYRQQPPVSQGQILRQQLQAKLQGQGIMGQQPVR
QMAPTPSYGALQPSQGYTPYVSHIGLQQHPPQSGTMVPPTYSGQPYQNSHPSSNPALVDP
VRQMQQRPSGYVHQQAPGYGHTLGNTQRFPHQSIQQAPMMSGMNHLGPQGVPSGIRPSQI
LPDQQQQQYLRQQQQQQQQMLRQQQQQQQQQQQQQQQQQQQQQPQPPQPQQQPQVSTVPQ
PQAQGQPPGLGMQALPPQQPIFQRQGLQQTQQQQQTAALVRQLQQQLSNTQTQQNNNPFG
RY
NT seq
6489 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttcggcgtcctcagctacgagcaccgcccgctcaagcgcccgcgcctcggc
ccgcccgacgtgtacccgcaggaccccaagcagaaggaggacgagctgactgcgctgaac
gtcaagcaaggcttcaacaaccagccggcggtctccggggacgagcacggcagtgccaaa
aatgtcaacttcaacccggcgaagatcagctcaaattttagcagtattattgcagaaaag
ctgcggtgcaatacactgcctgacacaggaagacggaaaccccaggtgaatcagaaggat
aacttttggctggtgacagcgcgttcccagagtgccataaacaactggttcacagacctg
gctggaactaagcccctcactcatcttgctaagaaggtgccaatctttagcaagaaggaa
gaagtctttggttatttggcaaaatacaccgttccagtaatgagagcagcctggctcatc
aaaatgacttgtgcttattatgctgccatcacagaaaccaaggtgaaaaagcgtcatgtc
attgatcccttcattgaatggacacagatcatcaccaagtacctgtcggagcagctgcag
aaaatcgcggagttctatagacagctcccagggcaaggatgtggttcaccatctgggcca
atgcctcaggaggtggaacaagctttgaagcagtgggactacaatgagaaactagctatg
tttatgttccaggatggcatgctggaccggcatgagttcctgacgtgggtccttgaatgc
tttgagaaaatacggtcaggagaagatgaatttctgaaaatgctcctgcccctgctgctg
cggtactctggagagtttgtgcagtctgcatacctgtccagacgcctggcctacttctgc
acccgcaggcttgctatgcagctggatggtgctggtgggcacccaccccacatcctgtct
gcccagacagggaacgctcttccttcaactcccacccctcagccagctgcagggaatcct
cctcccagccctttcagtgacttactgctgtgcccccagcaccggccagtggtttatggg
ctcagctgcatcctccagagtataattttgtgttgcccaagtgcccttgtgtggcattac
tcactgactgacagcagaataaagactggctctccattggaccacctgcctatagccccg
tccaacttgcccatgccaggagggaattcaacctttacacagcaggttcgggcaaagctg
cgtgagattgagcagcagataaaggaacgtggccaggctgtggaggttcgctggtctttt
gacaagtgccaggaaaccacagcaggcttcactattggccgtgtcttgcacactttagaa
gttctggacagccatagctttgaaagatctgacttcagcaactctttggattccttgtat
aacaggatatttgggctgggcccaaccaaagacagtcatgagatctccccagacgacgat
gcagtggtggccttgctgtgcgagtgggctgtcagctataagcgctctggacgccacagg
gctatggttgtggccaaactcctggagaagcgtcaagcagagatagaagctgagagatgt
ggggactctgaagttgtggatgagaagggctccatctcctcaggctctctctcagcagcc
agcgctcctgtctttcaggatgtccttatgcagttccttgacactcaagctcctatgtta
actgatcctgggaaggaaaatgagaaggtggagttctttaacctggtgctgctgttctgt
gagttaatccgacacgatgttttctctcacaacatctacatgtgcacactcatctcccgg
ggtgaccttgccatggattctcatgggcctcgcccgccgtcgcccttcgatgaccctgct
gaggagcatgacaggaaggagacagaaggaaacagtggcatcaagctagaggacacaggt
ctttctgagcccattgacattgaccacaactccagcatgctttttgatgacatggagaaa
acagacttctcgatgttttctcctccaatgcattgtgaatctaaagccagcccttcccct
gagaaaccagatcctgaaaaggaagcaaagcctctgctgaaggataagtctgtagaagga
atgctagcatccctatatgaccagcctcggcatatccagtatgcaacacacttccctatt
cctcaggaggagtcatgcagtcacgagtgtaaccagcggctggtagttctttttggagtt
ggaaagcaacgagacgatgctcggcatacgatcaagaagataaccaaagacattctaaaa
gttttaaacagaaagagcactgcagagacaggtggagaggaaggccagaagaggaaaaag
agcaagccagaagcattcccaacagctgaagatatctttgcaaagttccagcacctttct
cactttgatcagcaccaagtcacatctcaggtatctcgcaatgtcttggaacagatcacc
agctttgccttgggaatgtcataccacctgcctctggtacagcacgtgcagttcatattt
gacttgatggagtattcactcaatatcagtggtctcatcgactttgccatccagttgctg
aatgaactgagcgtggtggaggcagaactgctgttgaaatcctccgaccttgttggcagc
tacactaccagcttgtgcctgtgcatcgtggctgtgctgcggcactaccactcctgcctt
atattgaaccaggaccagatggctcaggtcttcgaaggtctgtgcggggtggtgaaacat
ggcatgaaccgctcagatggctcctccgcagagcgctgtatcctggcctatctctacgac
ctgtatacctcctgcagtcacctcaaaagtaaatttggggagctcttcagtgacttctgc
tccaaggtgaagaacacaatctactgcaatgttgagccatctgactccaacatgctatgg
gaaccagagttcatgattgacactattgaaaatccatctgcacataactttacgtacacc
aacctgggcaagagcctcaatgaaaacccagccaaccgctacagttttgtctgtaatgca
cttatgcacgtgtgtgtgggacaccacgacccagacagggtgaacgacattgctatcctg
tgtgctgagctaactggctactgcaagtctctaagcgccgagtggctgggtgtgctcaaa
gctttgtgctgttcctccaataatgggacctgtggcttcaatgatctcctctgcaatgtt
gatgtcagtgacttatctttccatgattccttggccacctttgttgccattctcattgcc
cggcagtgcttgctgctggaggacctgattcgttgtgctgctatcccctcactcctcaat
gccgcctgcagtgaacaggactcagaaccaggagcacgtctgacctgccgcatcttactc
catctgtttaagactccacagctgaacccatgccagcaggatggcaacaaacccacggtg
ggaattcgctcttcctgtgaccgtcacttactggcagcttcccagaatcgtattgtggat
ggagcggtcttcgcagtgctaaaggctgtctttgttctgggagatgcagaactgaaaggc
tctggcttttcccaccttggaggtgttgatgatctcatggatgatgaactgggcaccagg
aaggccagtggtcgggtagtaactgtagaaaccgctagcttggatatttatgccaagtat
gtactaaggagtatatgccagcaggagtgggtaggtgagcgatgtctgaagtccctctgt
gaagacagcaatgacttgcaggatcctgtcctgagcagcacacaggcccagaggctgatg
cagctgatttgttatccacaccgtctgctggacaatgaggaaggagaaaatcctcaacgc
cagaggattaaacgcatcttacagaatctggaccagtggaccatgaggcagtcctcactg
gagctgcagctcatgattaagcagacaacaaacaatgagatgaactccttgttagaaaat
atagccaaggccaccattgaggtattccagcagtcagcagagaccagctctgctagctgt
gctggcaatggagtcaacaatatcagtagctcagcaagtgctacgcctgccagtaacaaa
tccaaacccatcctcagctccctggagagatcaggagtgtggctggtggcccccctgatt
gccaagcttccaacgtcagtgcagggccatgtgctgaaagctgctggagaagaactggag
aaaggacaacatctggggtcatcatcccgcaaagagcgggaccgccagaagcagaagagc
atgtccctcctaagccagcagccatttctgtcactggtgctaacatgcttgaaaggacag
gatgagcagcgggaaggcctcctgacctctctgtacagccaggttcagcagatagtaaca
aattggcgggaagatcagtaccaagatgattgcaaagccaagcagctgatgcatgaggcc
ctcaagctacgtctgaatttggtcggaggaatgtttgacacagttcagcgcagtacacag
cagacaactgaatgggctgtgcttctcctggacatcatcagcagtggcactgtggacatg
cagtcaaacaatgaactcttcaccaccgttttggacatgctgagtgttctcatcaacggc
accctggctgctgatatgtctagcatttctcagggcagcatggaggagaacaagcgggca
tacatgaatcttgtcaagaaactcaggaaagagctgggggaccggcagtctgacagcctg
gagaaggtgcgacagctactgccacttcccaagcagacccgagatgtcatcacctgtgaa
cctcagggatccctcattgatactaaaggcaataaaatagctggctttgactccatcttc
aagaaggagggtttgcaagtctctacaaagcagaagatttccccttgggatctgtttgag
ggcttaaagcactcagcccccctctcctgggggtggtttgggacagtccgggtggatcgc
aaggtgtctaggtttgaggagcagcagaggcttcttctgtaccacacacacttgaaaccc
aagccccgcagttactacctggagccgttgccactgccccctgaagaggaagagcctcct
acacctgtggctttagagccggagaagaaagctgcggaaccagccaaggctgacaaaaca
agctctaatcctgccacctccactgaagaacgcaagaagaaacagagcaaaactaagaaa
cgcaaccaatctgccagcaaaaccgaggattttgtcttgggccctagccgcggggtttcg
tatggagttggtatgcctacagatctcttgcatcaccagtcaggaagcactatgtcaagg
ctggcatatgggcaatcaccagtgggtctctatgcccagaatcagcctcttccagcaggt
ggccctcgcctagatacatcctacagacctgtacgcatgccactggggaaactagttcaa
agtcgtcctccctatagtggtgtactgcctccagggatggggagcatgatgggcattgac
ccttcttacaagccagcagtgtacagacagcagcctccagtgtcccagggacagatacta
aggcagcagcttcaagcaaagttgcagggccaaggcataatgggacagcagcctgtgcgc
cagatggctccaaccccatcctatggagcactgcagccctcccagggttacacaccttac
gtctcccacataggccttcagcagcatcccccccagtcaggcacaatggtacctcctacc
tactctggccagccctaccagaattcccaccccagctctaatcccgccctggtggatcct
gttagacagatgcagcagagaccaagtggctacgtacaccagcaggctcctggctatggg
cacaccttgggcaacacacagaggtttcctcaccagtcaatacagcaggcccccatgatg
agtgggatgaaccatttgggtccccaaggagtcccctcaggaattcgacccagccagatc
ttgcctgaccagcagcagcagcagtacctgaggcagcagcagcaacagcagcagcagatg
ctgaggcagcaacagcagcagcaacaacagcaacaacagcagcagcaacagcagcagcag
cagcaacagccacagccaccacagccgcagcagcaaccccaggtctccacagtgcctcag
ccacaggcgcagggccagcccccagggctggggatgcaggctcttcccccccagcagccc
attttccagcgccagggccttcagcagacacagcagcagcagcaaacagctgctctggtt
cgacaacttcagcagcagctttccaatacacagacacagcagaacaacaacccgtttgga
cgctactga
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