Strigops habroptila (Kakapo): 115603109
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Entry
115603109 CDS
T08851
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115603109 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115603109 (THOC6)
03041 Spliceosome [BR:
shab03041
]
115603109 (THOC6)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
115603109 (THOC6)
Spliceosome [BR:
shab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115603109 (THOC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
WDR54
Beta-prop_DCAF4
Beta-prop_RIG_1st
Beta-prop_HPS5
Beta-prop_WDR11_2nd
WD40_like
Motif
Other DBs
NCBI-GeneID:
115603109
NCBI-ProteinID:
XP_030330583
UniProt:
A0A672V203
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MAAPIRAGPEAAPPPLPVPGGVKRSRQLLHMSVLSLSASPCGRYLAAGNNYGEIAVFSLS
AALSAEAKEESKRPIGVFQAHPGPVYSLASSERLLLSAGDGEVKGWAWNELGKKGTRELW
TRRPPCRTSLEVPEINSLQLNPRDNCVVLAGGDGAVRVLDMESGSFTHELRGHRDLVHCL
ALRDLPPHVLSGGEDGTVRLWDLRSGTQVQVIEVHKYEECSRPNHGKWIRCLATDSDWMV
CGGGPALTLWHLRSVTPTTVFPLPPRQHHALFHQDLVLAGGPGPALHQLQLSGELRGRVP
CTPPALRCLCLSPRPPEHQVLTVAGNSPKIDVFTNLGYRAFSLCFT
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccatccgcgccgggcctgaggcggcgcctccgccattgccggtgccgggc
ggcgtgaagcgatcgcggcagctcctccacatgagcgtcctctcgctcagcgcctccccc
tgcggccgctacctggcggcggggaacaactacggcgagatcgcggtgttcagcctctcg
gccgccctcagcgcagaggccaaggaggagagcaagaggcccattggtgtgttccaagcc
catccgggccctgtgtactcgctggcctccagcgagcggctcctgctcagcgccggcgat
ggggaggtgaagggctgggcctggaacgagctgggcaagaagggtactcgggagctctgg
actcgccgccccccctgcaggacgagcctggaggtgccggagatcaacagcctccaattg
aacccacgggacaactgcgtggtgctggcggggggggacggggccgtgagagtgttggac
atggagagcgggagcttcacgcacgagctccgggggcaccgggacctggttcactgcctg
gcgctgcgggacctgcccccccacgtgctctcggggggggaggacgggaccgtgcggctc
tgggatctccgcagcgggacccaggttcaggtcattgaggtgcacaagtacgaggagtgc
agccgccccaaccacgggaagtggatccgctgcctggccacggactctgattggatggtg
tgcggggggggcccggcgctcaccctctggcacctccgctccgtcacccccacgaccgtg
ttcccgctgccgccgcgccagcaccacgcgctcttccaccaggacctggtgctggcgggg
ggcccgggcccggccctgcaccagctgcagctcagtggggagctgaggggccgcgtcccc
tgcacccccccggccctgcgctgcctctgcctcagcccccggccccccgagcaccaggtg
ctgacggtggccgggaacagccccaaaatcgacgtgttcaccaacctggggtacagggcg
ttctccctctgcttcacgtga
DBGET
integrated database retrieval system
