Strigops habroptila (Kakapo): 115603125
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Entry
115603125 CDS
T08851
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shab03009
]
115603125
Enzymes [BR:
shab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
115603125
Ribosome biogenesis [BR:
shab03009
]
Eukaryotic type
Other ribosome biogenesis factors
115603125
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NSUN5_fdxn-like
NSUN5_N
Methyltr_RsmB-F
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
115603125
NCBI-ProteinID:
XP_030330650
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Position
13
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AA seq
465 aa
AA seq
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MAVYSAAAAVLQGLERGAGGVKELVYHSRFPHVRQLYALVAGTLRYSPVLEKLLAGAALL
QAEKKLSLHLAKVLVYDLLFGKGLKCGGRWKALARRHRARLEAELARLKVRQKVIRNEDL
LAPAQAGGPGASQVPRYVRINTLKTCVDDVIDFFKREGYSYLGKAASVEELRALSGKKFL
LDLHLPELLVFPPQTDFHDNLLYTSGHIILQDKASCLPAFLLSPAAGSHVIDACAAPGNK
TSHLAAILKNKGQIFAFDMDAKRLATMNTMLMRAGVTGFQLAQQDFLMVDPGDPKYSKVA
YILLDPSCSGSGMVNRVPTAEAAPSAERLQALAGFQRKVLSHALSFPALQRLVYSTCSLH
REENEDVVGAVLQERGSAFRLVHAFPCWPCRGLAAFPGAESCLRASAADTLTHGFFVAVL
ERRGDGAAASSSLPAAADNTSRHSEGTEPGAAPKKRKRKKQRVKE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtacagcgcggccgccgccgtcctgcaggggctggagcgcggcgccggcggc
gtgaaggagctggtgtaccacagccgcttcccgcatgtccggcagctgtacgcgctggtg
gccgggacgctccgctactcaccggtgctggagaagctgctggccggcgccgcgctgctg
caggccgagaagaagctgtccctgcacttggcgaaggtgctggtgtacgacctgctcttc
ggcaagggcttaaagtgcggcggccgctggaaggcgctggcccggcggcaccgggcccgg
ctggaggccgagctggcccgcctgaaggtgcggcagaaggtgatccgcaacgaggacctc
ctggccccggcgcaggcaggcggccccggtgcttcccaggtaccgcgctacgtccgcatc
aacactctgaaaacttgcgtggacgacgtgattgacttcttcaagcgtgagggctactcc
tacctgggcaaggcagccagtgtggaagagctgagggccctctccgggaagaaattcttg
ttggatcttcacctcccggagctgctggttttccctccgcagacagacttccacgacaac
ctgctatatacttcaggacacattattctgcaggacaaggccagctgcctcccggccttc
ctcctcagccctgctgctggctcccacgtcatcgatgcctgtgctgcccctgggaacaag
accagccacctggcagccatcctgaagaacaagggccagatctttgcctttgacatggac
gccaagcgcctggccaccatgaacaccatgctgatgcgtgctggcgtcactggcttccag
ctggcccagcaggacttcctgatggtggatcctggagaccccaagtacagcaaggtggcc
tacatcctccttgacccgtcctgcagtggctcagggatggtgaaccgggtgccgacggca
gaggctgcccccagtgccgagcggctgcaggcgctggccggcttccagcgcaaggtgctg
agccatgccctgagtttcccggctctgcagcgcctggtctactccacctgctcgctgcac
cgggaggagaacgaggacgtggtgggcgccgtgctgcaggagcggggctcggccttcagg
ctggtgcacgccttcccttgctggccttgccgaggactcgctgccttccccggggcagag
agctgcctccgcgcctctgctgccgacaccctcacccacggcttcttcgtggctgtcctg
gagcggcgcggggacggggctgctgcctccagctccctgcctgcggctgctgataacacc
tcccggcacagtgagggaacggagccaggagcagctcccaagaagaggaagaggaaaaag
cagcgggtaaaggagtga
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