Strigops habroptila (Kakapo): 115603470
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Entry
115603470 CDS
T08851
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04110
Cell cycle
shab04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115603470 (SMC1A)
04114 Oocyte meiosis
115603470 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shab03036
]
115603470 (SMC1A)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115603470 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
115603470 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
Ion_trans
AAA_21
TPR_MLP1_2
PKD_channel
Motif
Other DBs
NCBI-GeneID:
115603470
NCBI-ProteinID:
XP_030331235
LinkDB
All DBs
Position
Unknown
AA seq
960 aa
AA seq
DB search
MSESEENGEGPPKGLPPFPDAMGQPLGWPVGEGNGGPAGGGTPPGHRHRRPPHPKHKGQG
SGGVHRSPRALFCLRLNNPIRRAAISIVEWKPFDILILATIFANCVALGVYIPFPEDDSN
AANHNLEQVEYVFLIIFTVETFLKIIAYGLVLHPSAYIRNGWNLLDFVIVIVGQSLEEQK
RLEGELTEEVELAKRRIDEINKELNQVMEQLGDARIDRQESSRQQRKAEIMDSIKRLYPG
SVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPL
DYLEVKPTDEKLRELKGAKLVIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAFGGH
QRHKTVALDGTLFQKSGVISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKR
KEAELRQVQSQAHGLQMRLKYSQSDLEQTKTRHLALNLQEKSKLESELANFGPRINDIKR
IIQGREREMKDLKEKMNQVEDEVFEEFCREIGVRNIREFEEEKVKRQNEIAKKRLEFENQ
KTRLGIQLDFERNQLREDQEKVLMWEQSVRKDEAEIEKLKKEEQRHMKIIDETMAQLQDL
KNQHLAKKSEVNDKNHEMDEIRKKLGGANKEMTHLQKEVTAIETKLEQKRSDRHNLLQAC
KMQDIKLPLSKGTMDDISQEEGGPAGEEAVSSSQRSSSLYAREALIEIDYSDLPEELKDA
QAEEEIRQEMNQLQQRLTEQQSVLQRIAAPNMKAMEKLESVRDKFQETSDEFEAARKRAK
KAKQAFEQMKKERFDRFTACFEAVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDGINY
NCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANY
IKEQSAANFQAIVISLKEEFYTKAQSLIGVYPEQGDCVISKVLTFDLTKYPDANPTPNEQ
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtcagaagagaatggagagggaccccccaaggggctgccgcccttccccgac
gccatgggccagcccttggggtggccggtgggtgaaggcaacgggggtccagcgggtgga
gggacccccccgggtcaccgccaccggcgccccccccaccccaagcacaaggggcaaggc
tccgggggggtccatcgctccccccgtgccctcttctgcctccgcctcaacaaccccatc
cgccgggcggccatcagcatcgtggagtggaagccctttgacatcctcatcctcgccacc
atcttcgccaactgtgtggccctgggggtctacatccccttccctgaggatgactccaac
gctgccaaccacaacctggagcaggtggagtacgtgttcctcatcatcttcacggtggag
accttcctgaagatcatcgcctacgggctggtcctgcaccccagcgcctacatccgcaac
ggctggaacctgctcgacttcgtcattgtcatcgtggggcagtccctggaggagcagaag
cgcctggagggggagctgaccgaggaggtggaactggccaagcgccgcatcgatgagatc
aacaaggagctcaaccaagtgatggagcagttgggggacgcccgcatcgaccgccaggag
agcagccgccagcagcgcaaggccgagatcatggacagcatcaagcgcctctatcccggc
tccgtgtacgggcgcctcattgacctgtgccagcccacccagaagaagtaccagatcgct
gtgaccaaggtccttggcaagaacatggatgccatcatcgtggattccgagaagacgggc
cgggattgcatccagtacatcaaggagcagcggggggagcccgaaaccttcctgcccctc
gattacctggaggtgaaacccacagacgagaagctgcgggagctgaagggggccaagctg
gtgatcgacgtgatccgctacgagcccccccacatcaagaaggcgcttcaatacgcctgc
ggcaacgcgctggtgtgcgacaacgtggaggacgcgcggcgcatcgccttcgggggccac
cagcgccacaaaaccgtggcgctggatgggaccttgttccagaaatcgggggtgatctcc
gggggggccagtgacctgaaggccaaagcgcggcgctgggatgagaaggctgtggataag
ctgaaggagaagaaggagaggctgacggaggagctcaaggagcagatgaaggccaagcgg
aaggaggctgagctgcgccaggtccaatcccaagcccatgggctccaaatgcgcctcaag
tattcccaaagtgacctggaacagaccaaaacccgtcacctcgccctcaaccttcaggag
aagtcgaaacttgagagcgaattggccaattttgggcctcgcatcaatgatatcaaaagg
atcatccaaggccgggagcgggagatgaaggacctgaaagagaagatgaaccaggtggag
gacgaggtcttcgaggagttttgccgtgaaattggggtcaggaacattcgggagttcgag
gaggagaaggtcaagaggcagaatgagatcgccaagaagaggctggagtttgagaaccag
aagacccgtctgggcatccaactggactttgagcgcaaccagttgcgggaggaccaggag
aaggtgctgatgtgggagcagagcgtgcgcaaggatgaagctgagatcgagaagctcaag
aaggaggagcagcggcacatgaagatcatcgacgagacgatggcgcagctccaggacctc
aagaaccagcatctggccaagaagtcggaggtgaacgacaagaaccatgagatggacgag
atccgcaagaagctgggcggggccaacaaggagatgacccacctgcagaaggaggtgacg
gccatcgagacgaagctggagcagaagcgcagcgaccgccacaacctgctgcaggcctgc
aagatgcaggacatcaaactgccgctctccaagggcaccatggacgacatcagccaggag
gagggtggcccggccggggaggaggcagtgagcagctcccagcgctcatccagcctctac
gcccgcgaggcgctgattgagatcgactacagcgacctgcccgaggagctcaaggatgcg
caggcagaggaggagatccggcaggagatgaaccagctccagcagcggctgacggagcag
cagagcgtcctccagcgcatcgctgcccccaacatgaaggccatggagaagctggagagc
gtccgggataagttccaggagacctcggacgagttcgaggccgcccgcaagcgcgccaag
aaggccaagcaggcgtttgagcagatgaagaaggagcgtttcgaccgtttcaccgcctgc
ttcgaggccgtggccaccaacatcgacgagatctacaaagcgctgtcccgcaacagcagc
gcccaggccttcctgggccccgagaacccggaggagccgtacctggatggcatcaactac
aactgcgtggcccccgggaagcgcttccgacccatggacaacctctcggggggggagaag
acggtggctgccctcgccctgctctttgccatccatagctacaaaccggcccctttcttt
gtgctggatgagatcgacgcggcgctggacaacaccaacatcggcaaggtggcaaactac
atcaaggagcaatcggctgccaacttccaggccattgtcatctccctcaaggaggagttt
tacaccaaagcccaaagtctcatcggagtctaccccgagcaaggtgattgcgtcatcagc
aaagtgctgacctttgacctcaccaagtacccggatgccaaccccacccccaacgagcag
tga
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