Strigops habroptila (Kakapo): 115603612
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Entry
115603612 CDS
T08851
Symbol
ZC3H13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115603612 (ZC3H13)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
115603612 (ZC3H13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_4
zf-CCCH_PAN3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
115603612
NCBI-ProteinID:
XP_030331457
LinkDB
All DBs
Position
2:complement(94008196..94055660)
Genome browser
AA seq
1650 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFV
HGPSPRGKGYSSSYRRSPERPTGDLRERMKNKRQDLEAEPQKRSTEESSSPVRKESSRGR
HREKEDIKITKERTPESEEENGDWETNREDSDNGDVNYDYDHELSLEMKRQKIQRELMKL
EQENMEKREEIVIKKEISPEVVRSKLSPSPSPRKSSKSPKRRSSPKSSSSASKKEKKAST
VSSPLLDQQRSSKSNQSKKKGPRTPSPPPPVQEETPLGKKHKEKHKAKERSEEKTREVKE
RGRDFERHKEKKEKQRDASESSHRQKRSPSPADHSGSNSSPSREYSPPASRRRQTSRAPA
KTTTHKHNFSPSRRSASPSGQHHSPISSRHHSSSSQSGSSVQRHSPSPHRKRTPSPSYQR
TASPPARRSSSPYPPHSSSSPQRKRSPSRHRSPGREKGRHDRDRTSQSHDRRHERRDETR
GKREKERESRDDRDYDQEQSTSRDHRDDRESRDGRDRRETRDNRDRRETRESRDTRDSRD
TRDYSRDTKDSRDQRDSRSTRDSHDYRDRESRDAHKKDDQYQEDLRSYGRSHGREESSRA
ETRNDSRSDSRNESRSDRTGRSRGRGPELSDKGSRGTRGSQADGHSSSGNYHDSWESRSS
YPDRDRYDSREQARDSSFERRHGERDRRDNRERDQRASSPVRHQGRSDDLERDDRREERR
VDRSDDRREERARERERERERDRERERERDREREREKERELERDRARERERERERDKDRD
RERDRDRDHDREREREREREKEREREREERERERERERDRERERERDRGRDRDKERDRQR
DWDDKEKGREDRRDKREDIREERSSRDVHEERKSKKRHRNESSPSPRQSPKRRREHSPDS
DNYNSGDDKNEKHRLLSQVVRPQESRSLSPSHISEERQSRWKEEERKSDRKESSRRYEEP
EFKERVSSTDKQREQPDAEGSRSRVQENLGHRPSEERDTSDRMHDDSKKKSKVQKKATKK
KKDDDNGVERYATESTTEESQVFSPKKGQKKKNVERKRKRSKGDSEVSDEEIVPHHKKKK
GPRTPPVTKEELVEAPPEKAVAEVPQKREDTTFSDWSDEDVPERGDIVVPERSTEDSHRK
SHRTRGEKVEAPHVTIEDGPHRKPVDQKRSSSLGSNRSHASSRLRSPSNESAHRSGDDQT
GRKRILHSSSRDRDRDRDREKKNLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRR
SSPESDRQVHSRSGSFDSRERLQERDRHEHDRERERERREGRQRDWDRDVDKDWPRSRER
ERLREREREREREKRRELDRERERQLPDAAERERDRTLDISSQKESTKHSEMKLDRDHEK
EFDGICRDSAASEKERTDKDLGPLPGFEDGNEAEKVESLEGGEDETKIDDVQSLGSGAGE
YEPISDDELDEILAGDAEKREDQQEDEKMPGKNPVDVIDVDWSSLMPKQPKEPREPGAAL
LKFTPGAVMLRVGISKRLAGPELFTKIKETCQRALEKPKDAENLFEHELGALNMAALLRK
EERAGLLSNLGPCCKALCFRRDSAIRKQLMKNEKGATKQTYTNSAAMDSDLLRMSLRLFK
RKTVCQVPGQEKTEDSKIPQPALQQEVCVS
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattagaaggaaggtcacagtggaaaataccaagacaatatccgatagcaca
tcccgaagacccagtgtgtttgaaaggcttggacccagcactggaagtactgcagagaca
cagtgccgtaactggctgaagactggcaactgcctctatgggaacacatgtagattcgta
catggcccttcaccacgaggtaaaggctatagcagcagttatagaaggtcaccagaaaga
cccactggagatcttcgggaaagaatgaagaacaaacgtcaagatcttgaagcagagcca
cagaagcgaagtacagaggaatcgtcctctcctgttaggaaagagtcttcacgaggaaga
catagggaaaaagaggatatcaaaattacaaaggagagaacaccagaaagtgaagaggaa
aatggggattgggaaacaaatagagaagactctgataatggagatgttaattatgattat
gatcatgagctgtctttggaaatgaagcgccaaaagattcagagagaactcatgaaattg
gagcaggaaaatatggagaaacgagaggaaatagtcattaaaaaagagatttctccagag
gtggttagatctaaattatcaccatcgccatcaccaagaaagtctagcaaatctccaaaa
cgaagatccagtcccaaatcatcatcttcagctagtaagaaagagaagaaagcatctact
gtatcttccccacttctggatcagcagaggagttctaaaagtaaccagagtaaaaagaaa
ggcccccgtacccctagtcctcctcctccagtacaagaggaaactcccctggggaagaaa
cacaaagaaaaacataaagcgaaagaacgttcagaagaaaagacaagggaggtgaaagag
agaggccgtgactttgaaaggcacaaggagaaaaaagagaagcagagggatgcctctgaa
agctcccatagacagaagcgttctcctagtcctgcggatcattctggcagtaattcttcc
ccttccagggagtattcaccacccgcttcaaggcgaagacaaacctcccgagctccagcc
aagacaaccactcataaacataacttctcaccctctcgcaggtctgcatccccatcaggt
cagcaccattctcccatatcctccagacatcactcctcttcatcgcagtcaggctcctct
gttcaaagacattctccttccccacaccgcaaaagaactccttctccgtcctatcaaagg
acagcttccccacctgcaaggcgatcatcttctccatatcccccacactcttcctcttct
cctcagaggaagcgaagtccttcgagacaccgatctcctggaagagaaaagggaagacat
gatcgtgatcggacttcacagtctcatgacaggcgccacgaaaggcgggatgaaactaga
ggaaaaagggaaaaagaaagagaatcaagagatgatcgcgattatgaccaggagcagagt
acctccagggatcacagagatgacagagagtcccgtgatggaagagatcggagggagaca
agagacaacagagatcggagggagacaagggaatccagagacactcgagactccagagat
acgagggattatagcagagatactaaagatagtcgtgatcagagggactcacgctctact
cgtgattcccatgactacagagacagagagagtcgtgatgcccataaaaaggatgaccag
tatcaggaggacttgcgcagctatggaagatcgcatggcagagaggagagctctcgggcc
gaaacaaggaatgactccagaagtgactccagaaatgagagcagaagtgatagaactggc
agaagtcgaggcagaggtccagaattatctgacaagggaagtcgggggactagagggtcc
caggctgatggtcacagcagtagtggaaactaccatgacagctgggaatcaaggagcagc
taccctgaccgggatcgctatgacagtcgagaacaagcaagggattcctcttttgaaaga
agacacggtgaacgggacaggcgtgacaacagagaaagagatcagagagcaagctcaccg
gtacggcatcaaggacgaagtgatgaccttgagcgggatgatagaagagaagagagaagg
gtagatcggtctgatgataggagagaggaaagggcccgggagagggagcgagaaagagag
cgggaccgagagagggaaagggaaagagatcgggaaagagaaagggagaaggaaagagag
ttggagcgagatcgagctcgggaacgggagagggagagagagcgggacaaagacagggac
cgcgagcgggaccgagacagggaccatgacagggaaagggaacgagagagggagagggag
aaggaacgagaaagggagcgggaggaacgagaaagggagcgggagcgagaaagagatcgt
gagcgggaacgagaaagggacagaggtcgagacagggataaagaaagagaccgccagaga
gactgggacgacaaagaaaaaggaagggaagaccgcagggataagagagaagatatccga
gaagaaagaagttcaagagatgtccatgaggaaagaaaatccaagaagcgtcacagaaat
gaaagcagtccaagtcctcgtcagtcacccaaacgtcgccgtgagcactctcctgatagt
gataattacaacagtggagatgataaaaatgaaaagcacagacttctgagccaggttgtg
cggccacaggaatcccggtcactgagcccctctcatatttcagaagagcgtcagagtcgc
tggaaagaagaagagcgaaaatcagacagaaaggaaagttcccgacgttacgaagaacca
gagtttaaagagagagtttcttcaacagataagcaaagagagcaaccagatgcagaaggc
tccaggtccagggttcaggaaaatcttggacaccgtccctctgaagaaagagatacttct
gatagaatgcatgatgacagcaagaagaagtctaaggtacagaaaaaggccacaaagaag
aagaaagatgatgacaatggtgtggaaaggtatgctactgagtcaaccactgaggaaagc
caggtcttttcacccaagaaaggtcaaaaaaagaaaaatgtagagagaaagcggaagaga
tccaagggtgattctgaagtttctgatgaagagattgttccacatcataaaaagaagaaa
ggcccaagaaccccccctgtaacaaaagaagaattggttgaagcaccacctgaaaaagct
gtggcagaagtcccccaaaaaagagaagatacaacatttagtgactggtcagatgaagat
gttcctgaacgtggtgacattgttgttccggaaagaagcactgaggattcccatagaaaa
agtcacaggacgagaggagaaaaggtggaagcccctcatgttactatagaggatggacca
caccgtaaacctgtggatcagaagcgtagcagtagccttggcagtaatcgaagccatgcc
tcaagcagacttagatctccttccaatgagtcagctcatcgcagtggagatgaccagacc
ggacggaagaggatcctgcacagtagctctagagacagggacagggatagggacagggag
aagaaaaacttagaaatcactggggaacggaagtccagaattgatcagttgaaacgaggg
gaacccagtcgcagcacatcttcagatcgtcaagattcaagaagccacagttcaagaaga
agttctcctgaatcagatcgtcaagtccattccagatctgggtcctttgatagcagggaa
aggcttcaggagcgagatcgacatgaacatgatcgagaacgagagagagagaggagagag
ggaagacagagagactgggaccgagatgttgacaaagactggccgaggagcagggaacgg
gagaggcttcgagaacgggagagggaaagggagagagagaaacgacgggagctggacaga
gagagagagagacagctacccgatgctgctgaaagagagagagacagaactcttgacatc
tcctctcaaaaagaatcaacaaaacacagtgaaatgaaactggacagagatcacgaaaag
gagtttgatggtatttgtcgggattcagcagcttcagagaaggaaagaacagacaaagat
ttaggacctttaccaggttttgaagacggaaatgaggccgaaaaagtagagagtttagaa
ggaggagaagatgaaacgaagattgatgatgtacagtcactggggtctggtgctggggaa
tatgagccaatcagtgatgatgaactggatgaaattctggcaggtgatgctgaaaagcgg
gaagatcaacaggaggatgagaagatgcctggtaaaaatcctgtggatgttatagatgta
gattggtccagtcttatgccaaagcagccaaaagaaccacgtgaaccaggggctgcgctc
ttaaaattcacaccaggtgctgttatgttgagagttggcatttccaaacgactggcagga
ccagaactcttcaccaaaattaaagaaacttgccagagagcattagaaaaacctaaagat
gcagaaaacctttttgaacatgaactgggggccttgaacatggctgcacttctacggaaa
gaagagagagctggtcttctcagtaatctgggcccttgttgtaaagcactgtgcttccga
agggattctgcaattcgtaagcagctaatgaagaatgaaaagggcgcaactaaacaaact
tacacaaattctgcagcaatggacagtgacttgttacggatgagtctacggttattcaaa
cgaaagactgtgtgccaagtccctgggcaggaaaagaccgaagatagtaaaattccacaa
ccagctctccagcaagaagtgtgtgtgtcttga
DBGET
integrated database retrieval system
