Strigops habroptila (Kakapo): 115603625
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Entry
115603625 CDS
T08851
Symbol
TTF2
Name
(RefSeq) transcription termination factor 2 isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115603625 (TTF2)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115603625 (TTF2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
115603625
NCBI-ProteinID:
XP_030331495
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All DBs
Position
2:complement(20441513..20461163)
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AA seq
1173 aa
AA seq
DB search
MLLDVERAHLRSVCFLKTGVRDGPNKGKSFYVCGAQGPAACGFVLPAPIPASHCLIHEGC
VVELQVLVQVQGTDEYQLFYRCLRSKLNGKKWCGSIPWQDPKATKVSKALESHPSTVSLF
NPSGQRNPFKVIDKNSEPSSWKQMKQGNREESKANGVKAEKESVLLSHKEKKSTSDSSIE
KEPLEGLKTEKQAKGNGSDPEHKESIVSESKLDLSESWKGKNTLLKEEKSDGGGRESKKS
SECVEKEPGGRSKALPLSLGKQSTTTKPPEEEQLREKSLKSCGDKETREKEYVSWKNGEM
KPMSEGVISPAVPQPALQHAALKAGAEAVLPKTQIRPGLGQHADQVSGSDSGDVEYFYSS
LSKSKPEKSVEGLQSREIPSGKSAKSIQGTSLPGAAASRNVEGPQDPKALHNHLVVQLKQ
KKSTLATVNVQLLPDKGERLLKQVQDLEAALSALNVSTAEEDSTSSGCHEESLPNPFGRP
GGTKLITPLPLQDPTARTPSGSQSHPSAAAALGSSEYYGHSFGMNSGVQNLYGGRMTEDR
IRAVHSAISEAVNHLHTSLESCPREQTAAEDPSGLKVPLLLHQKQALTWLLWRESQRPCG
GILADDMGLGKTLTMIALILAQKQLKTEKREEKSEIWLSKNDSTVIPSCSTLIICPASLI
HHWKKEIDKRVGFGKLRVCLYHGPNRNKHAEVLSGYDVVVTTYSLLSKEVPTSKEEGEVP
AKDHDVTSGSFPCSPLLRVAWARVILDEAHNIKNPKVQTSIAVCKLRASARWAVTGTPIQ
NNLLDMYSLLRFLRCSPFDEYKVWKYQVDNNTKKGGERLSLLTRSLLLRRTKDQLDSAGK
PLVPLPQRSTQLHQLKLSAEEQSVYNVLFGKCRSTLQSYLKRQEQKNEGREYAGGNPFEK
VAQEFGLSQKEFLADSQSASKVSSTVHVLSMLLRLRQCCCHLSLLKVALDQANLNSEGIS
LSIEEQLSALTLSELQTPDSMSTVYLSGTAFQTDIFEITRESTKIAHLLAELKTIHSTSQ
KSVVVSQWTSMLKVVAEHLQRQGLKYATVDGSVNPKQRMDVVEEFNNNPKGPQVMLVSLL
AGGVGLNLTGGNHLFLLDMHWNPALEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKIAQL
QKRKKVLAQQVLSGKGETFTKLTLADLKILFGI
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgttgctggatgtggaaagggcacatctgaggtccgtctgcttcctgaagacgggcgtc
cgcgatggccccaacaaggggaagagcttctacgtgtgcggcgcgcagggccccgcggcc
tgcggcttcgtcctcccggcgcccattcctgcttctcactgcttgattcatgaggggtgc
gtggtggagctgcaagtcctggttcaggttcagggcacagatgaataccagttgttttac
cgatgccttagaagtaagttaaatgggaagaagtggtgtggaagcatcccatggcaggat
ccaaaagctaccaaagtgtcaaaagccttagaatcccaccccagcacagtatctctcttc
aatcccagtgggcaaagaaatcccttcaaagtgatagacaagaattctgaaccatcatcc
tggaaacaaatgaagcaaggaaacagagaggaaagtaaagcaaatggagtaaaagcagag
aaagaaagcgtgctgctatcgcataaagaaaagaaatcaacctctgattcctccatagag
aaagaacctctagaagggctgaaaactgaaaagcaggccaagggaaatgggagtgatcca
gaacataaggagagcatagtgtctgaatctaaacttgatctttctgagtcttggaaaggg
aaaaacacccttttgaaggaagagaaatctgatggcggtggcagggaatccaagaaatct
tcagagtgtgtggagaaagaaccaggcgggagatcaaaggcccttccactaagtcttgga
aagcaaagcacaaccaccaaacctccagaggaggagcagctcagagagaaaagcttaaaa
agctgtggggataaagaaaccagggagaaagaatacgttagttggaagaatggagaaatg
aaaccgatgtctgaaggtgtgatttccccagcagtaccacagccggcattgcaacatgct
gccctgaaggcaggagcagaggcagtgctgcccaagacacaaatcaggccagggctggga
cagcatgctgatcaagtctctggcagtgacagtggtgatgtagaatatttttattcctca
ttaagtaaaagtaaacctgagaaatcagttgagggtttgcagtcaagagagattccttca
gggaaatcagcaaagagtatacaggggacatctttgccaggagctgcagcatcgcgtaat
gtggaaggacctcaggaccctaaagctcttcacaaccatcttgtagtccagctgaagcag
aagaagagtacattggctacggtgaacgttcagctgctgccagataaaggggaacggtta
ttaaagcaagtgcaggatttggaagctgcactcagtgctcttaatgtttcaacagcagag
gaggatagcacaagcagcggctgccatgaggaatctttgcctaacccgtttggcaggcca
ggtggtacaaagttgataacaccactaccgctccaggatcctacagcaaggaccccttca
ggctcccagagtcacccctctgctgctgctgctttgggttccagtgaatattacggccac
agttttggaatgaactctggtgtgcaaaatctgtatggaggaaggatgacagaagacaga
atcagggctgtacacagtgccatcagtgaagctgttaatcatcttcacacatctttagaa
tcttgtccaagagagcagacagcagctgaagatccctctggattgaaggttccactgctg
ctgcaccaaaaacaggcactcacatggctactctggagagagagtcagaggccgtgtgga
ggaattctggcggatgacatgggcctggggaagactctaacaatgattgctctcattctg
gcccagaagcagctgaagacagagaagagagaggagaagtcagaaatatggctatccaaa
aatgattccactgttatcccttcctgcagcactttaataatttgtcctgcatccttgatc
catcactggaagaaagagattgacaagcgtgtgggctttggcaaactgagggtctgtttg
taccatgggccaaacagaaataaacatgctgaggtgctctctggatatgatgttgttgtc
acaacctacagccttctctctaaagaggtccccacaagcaaagaggagggggaagtccct
gcaaaggaccatgatgtgacgagtgggtcatttccctgttcccctctgctcagggtagct
tgggctcgagttatattggatgaagctcacaatattaaaaacccaaaggttcaaacctct
atagctgtctgcaaactgagagccagtgccagatgggctgtcactgggacgccaatacag
aacaacttactggacatgtactctctcctgaggtttctacggtgctctccttttgatgaa
tacaaagtgtggaagtaccaggtagataacaacacaaagaagggaggagagaggctaagc
ctcttaaccaggagcctgttattacggagaactaaggaccagctggattcagctggcaag
cccttggtacctctgccccagcgtagcacacagttgcaccaattaaaactttcagcagag
gaacagtctgtatacaatgtgctctttggaaaatgcaggtcaacactacaatcctatcta
aagagacaagagcagaaaaatgaaggcagagagtatgctggtggcaacccatttgagaaa
gttgcacaagagtttgggctcagtcaaaaggaatttctagcagactcccaaagtgcctcc
aaggtctcaagtactgtccacgtcttgtccatgctgttgaggctccgtcagtgctgctgc
catctctccttactgaaagtggctctggaccaagctaacttgaacagtgaaggcatttcc
ctctccattgaggaacagcttagtgctttgaccctgtctgagctccagactcctgattcc
atgtcaacagtctacctcagtggcacagcttttcaaacagatatctttgaaatcaccagg
gagagcaccaagatagctcacctcttggctgaactgaaaactattcactccacgtctcag
aaaagtgttgttgtctctcagtggacaagcatgttgaaagttgtggctgagcacctccag
cgacaagggctgaagtatgcaacagtggatggctctgtcaatcctaaacagagaatggat
gtggtagaagagttcaataacaatcccaaagggcctcaggtaatgttggtctcattgctg
gccggaggcgttggcttgaacctgactggaggaaaccacctctttctccttgacatgcac
tggaatcctgctcttgaggaccaggcatgtgaccgcatttaccgagtggggcagcagaag
gatgttgtaatacacaggtttgtctgtgaaggaacggtagaagaaaagattgcacaactc
cagaagaggaagaaagttctagcccagcaggtgctgtcaggcaaaggggagaccttcact
aagctcactctggctgacctcaaaattctcttcggcatctaa
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