Strigops habroptila (Kakapo): 115603665
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Entry
115603665 CDS
T08851
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115603665 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shab03021
]
115603665 (TAF4B)
03036 Chromosome and associated proteins [BR:
shab03036
]
115603665 (TAF4B)
Transcription machinery [BR:
shab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115603665 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
115603665 (TAF4B)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
115603665 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
115603665
NCBI-ProteinID:
XP_030331652
LinkDB
All DBs
Position
1:complement(46699087..46771132)
Genome browser
AA seq
835 aa
AA seq
DB search
MSTSAAAPVRLMPGGHPEQAAAAAAPPAADSPAANVPGGPAPSTAPQPPRLAAGTGGAPA
VRVVASGGPRPVAPKGPPAATLQLPANFQLSPGTILIRSSSGQLMLVSQQAIAQAQNQPQ
NNTSVRPSVPTTTPAIRICAVQNSGTQLLKKVSATSVKTLSQTPNAVASTVQPPAVIQTA
AATASVTTVTAVKPSSTGTPVKLPVTGPPAQAISQKAVSVKAEGTTVAQTSASTEMLENV
KKCKNFLATLIKLASSGPQAPETGQNVKNLVQNLLEAKIEPEEFTKKLYIELKSSPQPYL
VPFLKKSMLALRQLMPNAQSFIQQCMEQPAPTPEAVSTCISAAPATSLGVVTSAVGTTSL
PVIKPVSASVTVTASPVIKPVLVSASATACLQTMKSVPSSTVVTASLLPAASVLTTTTAT
SGLTAIQTVKPVFSSVVATSTLQSPKPVLVSTVASSATTPLQRLKSVTGTPISIKISQPN
SIAAQSVGAQQVVKVKQLVVQQPPGTIVKQVSALTQPSTLTLQTSQKRMPLNTLVQTNQF
PAGSILKQITLPGNKILSLQASPVQKAEIKENGATSFSRDEDDINDVTSMAGVNLNEENA
CILATNSELIGTVIRSCADEPFLSSEALQKKILNIGKRHDIMELNCDVVNLISHATQERL
RGLLEKLTVIAQHRVSTHKGSDRYIVSSDTRAQLRFLEELDHLEKRRRDEEEREMLLRAA
KSRSNKEDPEQLRLKQKAKEMQQLELAQMQQREANLTALAAIGSRKKRPLDSANVTSGLE
GLNGSGVAPGSSGFSLTKQLLCPRITRVCLRDLIFCMEQEREMKHSLTLYHALLK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctcggcggcggcccccgtcaggctgatgcccggcgggcacccggagcaggcg
gccgccgccgctgcgccgcccgccgcggacagccccgccgccaatgtccccggcggcccg
gcgccctccaccgccccgcagccgccgcggctggcggctggcaccgggggcgccccggcg
gtgcgggtggtcgccagcgggggcccgcggccggtggcacccaagggtccgcccgcggcc
accctccagttaccggccaacttccagctgtctccaggaactattcttatcagaagcagt
agtggccagctaatgctagtatctcaacaagcaatagcacaagcacagaatcagccacaa
aataacacaagtgtgagaccatctgtaccgaccaccacacctgcaatcagaatatgtgct
gtacagaactctggcacccagttactaaagaaagtatcagctacttctgtgaaaacatta
tcccaaacaccaaatgctgtggcttctactgttcagccacctgctgtaatacagacagca
gctgcgacagctagtgttactacagttactgctgtaaagccttcgagtactggaacacct
gtaaaacttccagttacaggaccacctgcacaagctatctcccaaaaggcagtctctgtg
aaagcagagggcacaacagtagcacagaccagcgcttctacagagatgctggagaatgtg
aagaaatgcaagaattttcttgctacgttaataaaactggcatctagtggacctcaagcc
cctgagacagggcagaatgtgaagaatctagtgcaaaatctactggaagcaaaaattgaa
ccagaagaatttacaaaaaaactatacatagagctgaagtcatctccacaaccgtattta
gttccttttctcaagaaaagcatgcttgctttacggcagctaatgcccaatgctcagagc
tttatccagcagtgtatggagcagccagctccaaccccagaagctgtttcgacttgtatc
tctgcagcaccagctacttcgttaggagtggtaacctcagctgtaggaacaacttctctt
ccagttataaaaccagtgtctgcctccgtaacagtcacagcctctccggttataaaacca
gtccttgtcagtgcatcagcgacagcatgtctgcagaccatgaagtctgttccttcctct
acagtagtgacagcatctcttctgcctgcagcttcagtcctcaccaccacgacagcaaca
tcagggctgactgctatccaaactgtcaagccagtcttcagctctgtggtagcaacgtcc
actctccagtctccaaagccggtgctggtctctacagtggcatcttcagcaacaacccct
ctccagcgtctgaaatcagtcactggaaccccaatcagtattaaaatctcacagccaaac
tccatcgctgcgcagtcagtgggtgctcagcaagtggttaaagtgaaacagttggtagtc
caacaaccaccagggaccattgtaaagcaagtatctgcactcacacaaccctcaacactg
accctacagacatctcagaaaaggatgccgctgaatacgcttgttcaaactaaccagttt
ccagcaggttccattctgaaacaaattaccctgccaggaaataaaattctgtcgcttcaa
gcatctcctgttcagaaagctgaaataaaagaaaatggagcaacatccttcagtagagat
gaagatgacataaatgatgtgacttctatggctggggtcaatcttaacgaggagaatgca
tgcattttggcaacaaactctgagctcattggtactgtgatccgctcttgtgcagatgaa
ccttttctctcctcggaagcacttcagaagaagatcttgaacataggtaaaaggcatgac
attatggaacttaactgtgatgttgtgaacttgatctcccatgctacacaggagagatta
cgagggctcctagaaaaactaactgtaattgctcagcacagagtatcaacccacaagggg
agtgataggtacatcgtatctagtgacaccagagcacagctgagatttcttgaagagctt
gatcacctagaaaaacggagaagggatgaagaggaacgtgaaatgttgcttcgagcagcc
aagagccgttccaataaagaagatccagagcaactgcggttaaagcagaaagcaaaagag
atgcaacagttggagttagcacaaatgcaacaaagagaagccaacctcacagctttggca
gcaattggatctaggaagaaaagaccactggattcagcaaacgttacatctgggctggag
ggtttgaatggcagtggagttgctcctggatcatcaggttttagccttacgaaacagctg
ctctgtccaagaataacccgtgtctgtctcagggacttgatattctgcatggaacaagag
agggagatgaagcattctctaaccttgtaccatgctcttctgaagtga
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