Strigops habroptila (Kakapo): 115603956
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Entry
115603956 CDS
T08851
Symbol
TRAPPC10
Name
(RefSeq) trafficking protein particle complex subunit 10 isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115603956 (TRAPPC10)
Membrane trafficking [BR:
shab04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
115603956 (TRAPPC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
NTS_TR130
SNAP
UFD1_N1
Motif
Other DBs
NCBI-GeneID:
115603956
NCBI-ProteinID:
XP_030332336
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All DBs
Position
2:34075004..34118195
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AA seq
1267 aa
AA seq
DB search
MDPAAAAAAEEEGREKPPVIYTMENKPIVTCAGDQNLFTSLYPTLSQQLPREPMEWRRSY
GRAPKMIHLESNFVQFKEELLPKEGNKALLTFPFLHIYWTECCDTEVYKTTVKDDITKWQ
NVLKAHNSVDWLIVVVESDAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKDS
SRSQESWNAFLTKLRTLLLMSFTKNLGKFEDDMRTLREKRTEPGWSFCEYFMVQEELAFV
FEMLQQFEDALVQYDELDALFSQYVVNFGAGDGANWLTFFCQPVRSWNGLILRKPIDMEK
RELIQNQEATLLDLRSYLFSRQCTLLIFLQRPWEVSQRALELLHNCVQELKLLEVSVPPG
ALDCWVFLSCLEVLQRIEGCCDRAQIDANVSHTVGLWSYATEKLKSLGYLCGLVSEKGPN
SEDLNRTVDLLAGLGAERPETANASQSPYKKLKEALSSVEAFEKHYLDLSHATIEMYTNI
GRIRSAKLVGKDLAEFYMRKKGPQKAEVYLQGALKTYLAEGWALLVTHTRKQLAECQKHL
GQIENYLQTSSLLAGDSHLTENERKSFCQEILDFANQQEENQGQKVILPMHSFAQLKTLH
FDPPNAVVHVGGKLSIELTLLSQMPIPVQVDQIAIHVHFSIEKNSYRKTAEWLTKHKTSN
GVISFPNEITGFPLSRNNLPALELYEMYERSPSDNSLNTAGIICKNVHMLLRRQESSSSL
DMPSGVTLEDGAHVLKCSNLILEPGVNKITFNTQAKEPGTYTLRQLCTSVGKVQFVLLHI
YPIVQYDVYSQEPQLKVEPMTDSLLAGIPQKVKFTVTTGHYTMKNGDTLQLSNADAMPIL
YHPESKAVIYSNIREKISESSLRIQSSEKITSISLPVAPAYHVIEFELEVMYLPSATQSV
VEKENTTNREVHRKNKEKQKQDNCMATVDQKVTIDCPWSIYSTIIALTFCIPFNAKHSLL
SAGKRKYVQVCVQNLSDLCFQLSDNSLKNSADCTDLQLVPLNPESQQVIYSKQSIFFVWE
LKWTKELPLSLQCLFSVSFCPATSEEQPLTLKPFTYEFQVENFFTLYHVKTEIFPPLGAE
YCKTGSLCSLEVSITRLVDLSEVDRDEALTESDGYCTTKLMYEVVDNSSNWAVCGKSSGV
ISMPVAARATHKVHMEVMPLFAGYLPFPDVRLFKYLPHHSAHSTQLDADSWIENDNLSVD
KNVDDQADSSSIRSRGSLHSAASGEHKGLPMPRLQSFSSGQVFNCSTGMQILVIPSKDDH
VLEVNVT
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggaccccgccgcggcggcggccgccgaggaggagggtagggagaaacccccggtgatc
tacaccatggagaacaagcccatcgtgacctgtgctggagatcagaatttatttacttcc
ttatatcctacgctttcacagcagcttcctagagaacccatggaatggaggaggtcttat
ggccgtgctccgaagatgattcatctagaatctaactttgttcagtttaaagaggagcta
ctacccaaagaggggaataaggctcttctgacttttccctttcttcatatttattggaca
gaatgttgtgacacggaagtgtacaaaactacagtcaaggatgacatcaccaaatggcag
aatgttctcaaagctcacaactcagtggactggctaattgtggtagttgagagtgatgcc
aagaaaaagaacaaaacaaatatccttccccgaacttctatagtagataaaataagaaat
gacttctgtaacaaacaaagcgacaggtgtgtggtactttctgaccctttgaaagactct
tcccgttctcaggaatcttggaatgccttcctgaccaaactcaggacattgcttctcatg
tcttttaccaaaaacttaggcaagtttgaagatgacatgagaactttgagagagaaaagg
actgagccagggtggagcttctgcgagtatttcatggtccaggaagaactggccttcgtc
tttgagatgctgcagcaatttgaggatgcactagtgcagtatgatgaactggatgccttg
ttttctcagtacgttgtcaactttggggctggtgatggtgcaaactggctgacatttttt
tgccagccagtgaggagctggaatggtttaatactccgaaaaccaatagacatggagaag
agagagctcattcagaatcaagaagccactctactggacttgcgtagttacctattttct
cgccagtgcacgttattaatcttcctgcagaggccatgggaggtttcccagcgagcattg
gagcttcttcacaactgtgtgcaagaactcaagctattagaagtctctgttcctcctgga
gctttggattgctgggtatttttgagttgtttggaagtcttacaaagaatagaaggctgc
tgtgacagggctcaaatagatgcaaatgtttcccacacagttggcttatggagctatgcc
actgagaagttaaaatctctgggttacctgtgtggacttgtgtcagagaagggacccaat
tcagaagaccttaacagaactgttgatctgttagctgggttgggagcagaacgacctgaa
acagccaatgcatcccagagcccttacaagaaacttaaagaggccttatcatctgtagaa
gcttttgaaaaacactacttggatctgtcccatgccaccattgaaatgtacacaaatatt
ggaagaattcgctcagctaagcttgtgggaaaggacttggcagagttttatatgaggaag
aaaggtccacagaaggcagaagtctatcttcaaggagcactgaaaacttaccttgctgag
ggctgggcattgctcgtcacacatacaagaaaacagttagctgaatgtcagaaacacctt
gggcaaatagaaaattatcttcaaacaagcagccttttagctggtgatagtcacttaaca
gaaaatgaacgcaaaagcttttgccaagaaatactagattttgccaatcagcaagaagag
aaccaaggtcaaaaggttatattgcctatgcattcctttgcgcagttgaaaactctgcat
tttgaccctcctaatgctgttgtccatgtgggtggaaagttgtcgattgagttgactttg
ctgagccaaatgcctatccctgtccaagtggatcagattgccatccatgttcacttcagc
attgaaaaaaatagttacagaaaaacagctgagtggctcactaagcacaaaacttccaat
ggtgttatcagctttcctaatgagattacaggctttcctttgtcaagaaacaacttgcca
gctctggagctatatgaaatgtatgaacggagtccctcagataattctttgaacacagca
ggaataatctgcaaaaatgtgcacatgctactacgaaggcaagagagcagcagttcactg
gatatgccttcaggggtgactttagaagatggggctcatgtgttgaaatgcagcaactta
atactggaaccaggggtcaataaaataacattcaatactcaggccaaagaacctgggaca
tacacgctcaggcaactgtgcacttcagtgggaaaagtacagtttgtccttcttcatatt
tacccaattgtgcagtatgatgtatattctcaggagccccagctaaaagtggaaccgatg
actgatagccttttggctggcattccccagaaggtgaaattcacagtgactactggtcac
tacaccatgaagaatggggacactttgcagctcagtaatgcggatgccatgcctattctg
taccatccggagagcaaggcagtgatctattccaacatcagggagaagatctcagaatca
tcattaaggattcagtcttctgaaaagatcacaagcatcagtttgccagtggctcctgca
tatcatgtaattgaatttgagctagaagtcatgtacttgccatcagccacacaatcggta
gtggagaaagaaaatactaccaatagagaagttcacagaaaaaacaaagagaagcagaaa
caggacaactgcatggctactgttgaccaaaaagtaaccattgattgtccttggtcgatt
tactccactattattgcattaacattctgcataccttttaatgccaagcattccttattg
tcagctggcaaacggaaatatgtgcaagtctgtgtacagaatttgtcagacctctgtttc
cagctttcagacaacagcctgaaaaattctgctgactgtacagatttgcagctggtacct
ctgaaccctgaatctcaacaggtcatatacagtaagcaatcgatattctttgtatgggaa
ttgaagtggacaaaagagcttcctctctccttgcagtgcctgttttcagtcagcttttgt
ccagctacctctgaagaacagcctcttaccctgaagccgttcacttatgaattccaagtc
gaaaatttttttacattgtatcatgtgaaaactgaaattttcccaccactgggggcagag
tattgtaaaacaggctcactctgctctttagaggtgtcaatcacccgactcgttgacctc
tcggaagtcgacagagatgaagcattaacggaatcagatggatattgcacaacaaaactg
atgtatgaggttgttgacaacagtagtaactgggcagtctgtgggaaaagttctggtgtg
atatctatgcctgtagcagctcgagcaactcacaaagtccacatggaagtgatgccgctg
tttgccggatacctaccttttcctgatgtcagattgtttaaatacctccctcaccattct
gctcactccacacaacttgatgctgatagctggattgaaaatgataacctctctgtggac
aagaatgtggatgatcaagctgacagcagcagcatcaggagcagaggtagtttgcattct
gcagctagcggggaacacaaaggtttgccaatgccccgtctgcaatccttctcatctggt
caggtctttaactgcagcacgggtatgcaaatacttgtcattcccagcaaggacgaccat
gttctagaagtcaatgtcacgtga
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