Strigops habroptila (Kakapo): 115603995
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Entry
115603995 CDS
T08851
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115603995 (SOX1)
Transcription factors [BR:
shab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115603995 (SOX1)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115603995
NCBI-ProteinID:
XP_030332450
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All DBs
Position
2:complement(63307286..63310366)
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AA seq
377 aa
AA seq
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MYSMMMETDLHSPGGAQAPTNLSGQTGAGGGGGGGGGGGGGGGGNKANQDRVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYK
YRPRRKTKTLLKKDKYSLAGGLLSAGSAGGGPAGVGVGMGVGVSPGGVGQRLESPGGTAG
GGYAHMNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGSGGHPHHPHPHHPHHPHNPQ
PMHRYDMGTLQYSPISNSQGYMSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGAL
GALGSLVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAAAAQSRLHSLPQH
YQSASTGVNGTVPLTHI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcccccggcggagcccaggcccccacg
aacctctcggggcagaccggagcgggaggaggtggtggcggcggcggtggcggcggcggc
ggcggaggggggaacaaagcgaaccaggaccgggtcaagagacccatgaacgccttcatg
gtgtggtcgcggggccagcggcggaagatggcccaggagaaccccaaaatgcacaactcg
gagatcagcaagcgcctgggggccgagtggaaagtcatgtcggaggccgaaaagagaccc
ttcatcgacgaggcaaagcggctgcgggcgctgcacatgaaggagcacccggattataaa
taccggccccggcggaagaccaagaccctgctcaagaaggacaagtactctctggccggg
ggactgctgagcgccggctcggccgggggaggcccggccggcgtcggtgtgggcatgggc
gtcggcgtcagtcccggcggcgtcgggcagcggctggagagccccggcggcacggccggt
ggcggctacgctcacatgaacggctgggccaacggcgcctacccgggctcggtggccgcg
gcggcggcggcggcggcgatgatgcaggaggcgcagctcgcctacggccagcacccgggc
agcggggggcacccgcaccacccgcacccccaccacccgcaccatccgcacaacccgcag
cccatgcaccgctacgacatgggcaccctgcagtacagccccatctccaactcgcagggc
tacatgagcgcctcgccctcgggctacggcgccctgccctacggctcccagccccaccag
aactcggcggcggcggcggcggcagcggcggcggcggcggccgcctcctcgggggcgctg
ggcgcactgggctcgctggtgaagtcggagcccagcgtgagcccgcccgtcacctcgcac
tcgcgggccccgtgccccggggacctgcgggagatgatcagcatgtacttaccggccggg
gaaggcggggatccggcggccgccgccgcccagagccgactccactccctgccccagcac
taccagagcgccagcacgggggtgaacggtaccgtccccttgacgcatatctga
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