Strigops habroptila (Kakapo): 115604002
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Entry
115604002 CDS
T08851
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115604002 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shab04121
]
115604002 (LMO7)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115604002 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
115604002
NCBI-ProteinID:
XP_030332467
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All DBs
Position
2:complement(80927941..81057946)
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AA seq
1370 aa
AA seq
DB search
MEGREDVECDCRAAFAEARRWVETVTGKSFGTKDFRAALENGVLLCDLINKIKPGIVKKI
NRLSTPIAGLDNINVFLKACENIGLKEAQLFHPGDLQDLSNRVTVKPEETNRRVKNVLIT
LYWLGRKAQSNPHYNGPYLNLKAFEKLLGQALTKALEESSHLNRSGRDSGYGDIWYVDRG
EPFPSSASHKRDDSFDSLDSLGSRSSTSFSSDITLKGGSEGCDSDTDSELPFKMHDSHKD
DRSYRRISVIEPKPTTDFNRFLPNKNKQTAYVPAPLRKKRTEKNEDNRRSWASPVFTDSD
GTFSRLFQKLSDEQGSKSLNDVSAEELQSLRKIRYEELQKIKEQLQEQDLKWQEDLAKWK
NRRKSFTSELQKKKEEREEIERRASEVSERSTKSLKEMQQEREDRDQDSYRQRKYEHRWT
YSLNDDVFTEEKAPSTLSAAKDYLLEEDTTYITKDSKSANAAQQRKENLRENLAAHEAPS
PPKSLAEEQSSALLFTRYTANAQTGSAQVSASLPRSYQKTDTTRLTSVVTPRPFGVHSRG
ISSLPRSFTMDDTQKYNGEVEKPKRTQTLFTSSSFSQPDSAHPLSAGAFKSRGEEEEEEE
KEGVQSTPPPSSALPVKSQDEDAGSSILKPEYCSPPDSLSLASSAENVSLPEPGDSKSQE
QYSEMRISINQRPGHSRSFGFTTNWSSSGVFVKTVEEVSPASVCQLHVDDEIIAINGTKV
SCMDYRQWEEAINKALETGNLLMDVRRYGKNDWGKDLPSLPHVRHKILNLTSMATDIIGA
SENKWIDATSGEHISNVSTVSTKRDLSSSLQSSDTETKLINGMQGDLGSNEQRASEPISL
KNLIRRSQFFEQGGPEPAMPDLPVPSISAPSRRVWDQEEERKRQEKWQKEQDRLLQEKYK
QEQEKLREEWLRAKQEAEKESSKYFDEEQSVLTLNTSVPARAPSVSSWRASSEANTPEEP
EEDGGSKVAACLLGEEEGRRRHQEERRIQEEAALRFEQERELRELELERQRKEREQQYAD
EQRRRAEMEEQRRRAEMEEQRQQAEMEEQRRQAERQKEVSVEVPQYQRHYERYEVSKTIE
DRAGHPVIDRHHERYEVSKTIEEQPGQSFADRNKSKSTSELNEFNTIRNGTQSKYSEKSW
NMGESQKKSQKEHNLSAAELERQQILQEMRKKTSLHTDSSWIRQRSSSIHKEPISLYSSS
MRRGESLDNLDSSRTSSWRHHSWLNQSVSSSSLSSTQDFSRPVSTSNRAYMCTPSSKAPP
VATSQRAPSVPQAGPRAQSPLSASQPGSQTRSRSVSGKKICSYCNNVLGKGAAMIIESLG
LCYHLHCFKCVACGCDLGGSRSGAEVRIRNDKLFCNDCYIRFKTGQPTSM
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atggaggggagagaggacgtggagtgcgactgccgggcggcgtttgccgaagctcggcga
tgggtagagacagttactgggaaaagctttggaaccaaagactttcgagcagctctagaa
aatggagtcctgttgtgcgatttgattaacaagatcaaacctggcattgttaagaagatc
aatcgcctgtcaactccaatagctggcttggataatataaatgtttttctgaaagcgtgc
gaaaatattggactgaaagaagctcagctttttcatccaggagatcttcaggatttgtcc
aatcgagttacagtcaaaccagaggagaccaacagaagagtgaaaaatgttttaattaca
ttatactggcttgggagaaaagctcaaagtaaccctcattataatggtccatacctcaat
cttaaagcatttgaaaagttattagggcaagcattgactaaggcacttgaagagtccagc
cacctgaacagaagtggcagggatagtggatacggtgatatttggtacgttgaccgggga
gagccctttccatcttcagctagccataaaagagacgattccttcgatagcttggactct
cttggttcaagatcttccacaagcttttcatcagatataaccttgaaaggtggcagtgaa
ggttgtgacagtgacacagactcagaactgcctttcaaaatgcatgactcccataaagat
gacaggtcttaccgcaggatttctgtgattgaaccgaagcctaccactgatttcaatcgc
ttcttacccaacaaaaacaagcagacagcatatgtgccagcacccttaaggaagaaaagg
acagagaagaatgaggacaacaggaggagctgggcaagtcctgtctttaccgactcagat
ggaacgttttcaagactgtttcaaaagctttctgatgagcaagggagcaaatctttgaat
gatgtcagtgcagaggagctgcagtcattgcgcaaaatccgttatgaagagctacaaaag
atcaaagaacagttacaagaacaagatctaaaatggcaagaagatctagcaaaatggaag
aatcgtagaaagagcttcacttctgaattgcaaaagaagaaggaagagagagaagaaata
gaaaggagagcctctgaggtgtctgaaaggagtaccaagtcactgaaagaaatgcagcag
gagagggaggacagagatcaagactcctacaggcagcgaaaatacgaacacagatggaca
tattcactgaacgatgatgtgtttactgaagaaaaagcaccttccacactgtcagcagca
aaagactaccttttggaagaagataccacctacatcactaaggacagcaaaagtgcaaat
gccgcgcaacagcgcaaggagaacctgcgagagaacttggctgctcatgaagctccctct
ccaccaaagagcctggcagaggagcagagctcggctcttttgtttacccgctacacagcg
aatgctcaaactgggtcagctcaggtttcagcttctctcccgagaagttaccagaaaacg
gataccactaggttaacatctgtggttacaccaagaccttttggtgtccactcaagagga
atctcgtcacttccacggtcattcacgatggatgatacccagaaatacaatggagaagta
gaaaaacctaaaagaactcaaactttgttcactagcagttcgttttcacaaccagactct
gcacaccctctctccgctggtgcattcaaaagcagaggtgaggaggaggaggaggaggaa
aaagaaggtgttcagtcaacacctcctcctagttcagcattacctgtaaaatcccaagac
gaagatgctggaagcagtattcttaaaccagagtattgctctcctcctgattctctttca
cttgcatcttctgcagaaaatgtgagtctgccagagcctggggattcaaaatcccaggag
cagtacagtgaaatgagaatcagtataaaccagagacctggccacagtcgcagctttggg
tttacaacaaattggagttcttcaggggtctttgtaaagacagttgaagaagttagccct
gcatcagtttgtcagctgcatgtagatgatgaaattattgctatcaatggcacaaaggtt
tcatgtatggactatagacagtgggaagaagccatcaacaaagcgctagaaactggaaac
ctgctcatggatgtcagacgatatggaaagaatgattggggcaaagacctgccttccctg
ccacatgtaaggcataaaatcctcaatctcaccagtatggctaccgacattataggtgca
tctgaaaataaatggattgatgcaacttctggagaacacatttcaaatgtttccaccgta
tcgacaaaaagagatttatccagcagccttcaaagttctgatacagaaacaaaattgata
aatggaatgcaaggagatcttggctctaatgaacaaagagcatctgaacctatttctttg
aaaaacttaataagacggtcacaattttttgagcaaggaggcccagaacctgcaatgccc
gatctcccagtcccatccattagtgctcctagtcgtcgggtttgggatcaagaggaagaa
cgaaaacgacaggaaaaatggcaaaaggagcaggaccgtttactgcaggagaagtacaaa
caggaacaagaaaaactgagggaagaatggctacgagctaagcaagaagcagaaaaagag
agctccaagtattttgatgaggagcagtctgttctaaccttaaacacatctgtccctgct
cgagctccatctgtgtccagctggagagcaagctcagaagcaaatactcctgaggagcca
gaagaagatggaggaagcaaggtagcagcatgcttgttgggtgaggaagaaggaagaagg
agacatcaggaggaacggaggatccaggaagaagcagccctgcgttttgagcaagaaagg
gagctccgagagctggagcttgagagacaacgtaaagagagggaacagcaatatgctgac
gagcagaggcggcgggcagagatggaagaacagaggcgaagggcagaaatggaggagcag
aggcagcaggcagagatggaggagcagagacgtcaggctgaaaggcagaaggaggtgtca
gtggaggtgcctcagtaccaaagacattacgagcgctatgaagtatctaaaacaatagag
gatcgggctggccatcctgtcattgacaggcatcatgagcgttatgaagtttctaaaacc
attgaggagcaacctggacagtcttttgctgacaggaataagtccaagtcaacttcagaa
ctgaatgaattcaacacaatcagaaatggtacccagagcaagtattcagagaagtcctgg
aacatgggtgagtcgcagaagaagtctcagaaggagcacaacctgtctgcagcagagctg
gagagacagcaaatcctccaggaaatgagaaagaaaacatctctacacacagacagcagc
tggattaggcagcgcagctccagtatacataaggagcccattagtctgtacagcagtagt
atgaggagaggcgaatctttggataatcttgattcttcaagaacaagttcatggaggcac
cactcatggctgaaccagtctgtctcctcttcatctctatcctctactcaagatttcagt
cgcccagtgtccacttcaaaccgagcctacatgtgcactccttccagcaaagcaccccca
gtggccacctctcagagagccccctctgtgccccaggcaggcccccgggctcagtctccc
ctctctgcttcccagccaggttcccagacacgcagcaggtcagtcagtgggaagaaaatc
tgttcatactgtaataacgttctgggcaaaggagcagccatgatcattgagtctcttggt
ctttgttatcatttacattgctttaagtgtgttgcctgtggatgtgacctcggaggatcc
cgctctggagctgaagttaggatccgaaacgacaaactcttctgcaacgactgctatatc
agatttaaaactggacaaccaacctccatgtga
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integrated database retrieval system
