Strigops habroptila (Kakapo): 115604199
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Entry
115604199 CDS
T08851
Symbol
NUP42
Name
(RefSeq) nucleoporin NUP42
KO
K14321
nucleoporin-like protein 2
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115604199 (NUP42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115604199 (NUP42)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115604199 (NUP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH_4
zf-CCCH
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
115604199
NCBI-ProteinID:
XP_030332945
UniProt:
A0A672TX53
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Position
1:130758133..130767794
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AA seq
426 aa
AA seq
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MAICQFFLQGRCRFGERCWNEHPRGGVRYGPSAPLYQGTSRGGGGGGWGSTNQRYSNVIQ
PSTFKSNVWGGSRDYGRGLSVSSGFGSSGGSSGNADFSQNRFAVLGNSQNIADGYKDEEE
RLLECVVKDMEIWESSGQWIFSSYSPVKEKLNVSGFRDFSPEELHLEYYNCRANNNIQNY
INSVQQLAEQWKTRLLQLKVLNASTKAALLSELKNTVTQSLPAFGFGGQQSLNFGLSSFP
VISSSSSVNSFSFKTSSSLANASSGNTPAFGSSSAGCNPPAFGASSSLSVSQSVGFGSPA
APSAASFSFKTSETTGGFGTSGFSGFGTASAVNSSNIAPLKGFGDFSAAVATSPSHSSST
LFGQTASASGQTLMSAPSAVTNNTASEKLFTPKSELSAEDLKQFEAKKFTIGKIPLKPPP
LELLNI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggccatctgtcagttcttcctgcagggccgctgccgcttcggggagaggtgctggaac
gagcatccccgcggcggcgttcgatacgggccctccgcgcccctctaccaaggtacaagc
agaggaggaggtggaggaggatggggtagcactaaccagagatacagtaatgttatccag
ccatctacctttaagtctaatgtgtggggtggaagcagagattacggaagaggactttct
gtctcctctggctttggatcatcaggcggcagcagcggaaatgcagacttttcacagaac
agattcgctgtattagggaacagtcaaaacattgctgatggctacaaagatgaagaggag
agacttcttgaatgtgtagtgaaagacatggaaatttgggaatcttcaggacaatggata
ttttcatcttattcaccagtgaaagaaaagttgaatgtctcaggctttcgagatttctca
ccagaagagctgcatctggagtactataactgcagagcaaacaataacattcagaactat
ataaattctgtccaacagttagcggaacaatggaaaactcgactgcttcagttaaaagtt
ttaaatgcatcaacaaaagcagccttgctatccgaactaaagaacacagtcactcaatca
ttgcctgcctttggatttggaggacagcagtcattgaactttgggttgtcaagttttcct
gtgatcagcagcagtagcagtgttaacagtttctcctttaaaacaagttccagtctcgcc
aatgcatcgtctggaaacacccctgcttttgggagctcttctgctggttgtaatcctcct
gcatttggtgcgtcatcctctcttagcgtatcccagtctgttggttttggcagcccagca
gctccatctgcagcctccttctcatttaaaacttctgaaacaactggtggttttggaact
tctgggttttcagggtttggcactgcttctgctgtgaactcttcaaacatcgctccactt
aaaggctttggagattttagtgcagcagtagcaacttctccctcacattcaagcagcact
ctatttggacagactgccagtgcctctggacagaccttaatgtcagcgccttctgcagtc
acaaacaatactgcatcagaaaagttatttacaccaaagagcgaactgtcagctgaagac
ttgaaacaatttgaagcaaaaaagtttacaattggaaagattcctcttaagccaccacca
ttagaactcttaaatatttag
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