KEGG   Strigops habroptila (Kakapo): 115604210
Entry
115604210         CDS       T08851                                 
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab03030  DNA replication
shab03410  Base excision repair
shab03420  Nucleotide excision repair
shab03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:shab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115604210 (RFC3)
   03410 Base excision repair
    115604210 (RFC3)
   03420 Nucleotide excision repair
    115604210 (RFC3)
   03430 Mismatch repair
    115604210 (RFC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shab03032]
    115604210 (RFC3)
   03036 Chromosome and associated proteins [BR:shab03036]
    115604210 (RFC3)
   03400 DNA repair and recombination proteins [BR:shab03400]
    115604210 (RFC3)
DNA replication proteins [BR:shab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    115604210 (RFC3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    115604210 (RFC3)
Chromosome and associated proteins [BR:shab03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    115604210 (RFC3)
DNA repair and recombination proteins [BR:shab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     115604210 (RFC3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    115604210 (RFC3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA Rad17 AAA_16 AAA_22 ABC_tran AAA_2 DUF2247 AAA_11 Sigma54_activ_2 ATPgrasp_ST
Other DBs
NCBI-GeneID: 115604210
NCBI-ProteinID: XP_030332951
UniProt: A0A672UGF6
LinkDB
Position
2:complement(100045113..100061671)
AA seq 356 aa
MSLWVDKHRPASLGRLDYHREQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSITAPSKKKIEISTIASNYHLEVNPSDAGNNDRVVIQELLKTVAQSQQ
LETSTQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSMSKIIGPIQSRCL
AVRVPAPSIEDICHVLSTVCKKEGLTLPHELAQRLAEKSGRNLRKALLMCESCRVQQYPF
TADQDIPEMDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLTELL
SNCDGQLKGEVAQMAAFYEHRLQLGSKAIYHLEAFVAKFMAIYKKFMEDGLDDMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagcctgtgggtggacaagcaccgtcccgcgtccctcggcaggctggactaccaccgc
gagcaggcggcgcagctccgcaacctggttcagtgtggtgacttccctcatctgttggtg
tatggaccatcaggagctggaaaaaagacaagaataatgtgtctgttaagggaattatat
ggtgcaggagtggaaaaactgaggattgagcatcaaagtataacggcaccttctaaaaag
aaaattgaaattagcaccattgcgagtaattatcaccttgaagttaacccaagtgatgcg
ggaaacaatgatcgtgtggtgattcaggaactcttgaagacagtagcacaatcccaacag
cttgagacgagcactcagcgagattttaaagtggtgctgttaacagaagtcgacaaactc
actaaagatgctcagcatgctttgcgaagaacaatggagaagtacatggcgacctgcagg
ttgatcctgtgctgcaactctatgtcaaaaattataggacctattcagagcagatgcctg
gctgtacgagtgcctgctcccagcattgaagatatctgccatgtcttgtccactgtgtgt
aagaaagaaggcctgactcttccgcacgaactggctcaaaggcttgcagagaaatctggc
aggaatcttcggaaagcactacttatgtgcgagtcctgcagggtacaacagtatcctttt
actgctgatcaggacattcctgagatggactgggaagtttatttgagagaaactgcaaat
gctattgttagtcaacagacaccacaaaggcttttagaggtccgtggacggctttatgaa
ctcctgacacactgcattcctcctgagattataatgaagggcctcctgacagaacttcta
agtaactgtgatggacaactgaaaggagaagttgcacagatggcggccttctatgaacac
cgcctgcaactgggcagcaaagccatttatcatctggaagcgtttgttgcaaaatttatg
gcaatttacaagaaatttatggaggatggactagatgacatgatgttctaa

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