Strigops habroptila (Kakapo): 115604301
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Entry
115604301 CDS
T08851
Symbol
PCDH8
Name
(RefSeq) protocadherin-8 isoform X1
KO
K16499
protocadherin delta 2
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shab04515
]
115604301 (PCDH8)
Cell adhesion molecules [BR:
shab04515
]
Cadherins
Protocadherins
115604301 (PCDH8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
115604301
NCBI-ProteinID:
XP_030333144
UniProt:
A0A672TRK4
LinkDB
All DBs
Position
2:91643883..91648243
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AA seq
999 aa
AA seq
DB search
MRSPLRLLAAACLLALSRGKTVRYRTDEEGAPGTVIGTLADEMPVKAPGEMSFRLMRQFS
NSSLVRVREEDGQLSIGEAGLDRERLCGQAPQCVLAFDVVSCWRERYRLVHVELEVRDIN
DNAPRFPRAQMTLEVSESAAPGTRLPLEVAVDEDVGSNSIQSFQVSLNSHFGVEAQTRAD
GARCADLVLLQELDRERQPSYTLELVAKDGGSPARSGTATVHVRVLDANDNSPAFAQGSV
TVELPEDAPPGSLLLDLDAVDPDEGPNGEVVYAFSSQVPPEARRLFRLDPRSGRLTLEAA
VDYERTRTYELDVRAQDRGTSPRAATCTVVVRLTDVNDNAPRISISALRGAASAAGVAYV
SEAAASESFVALVSASDRDSGANGQVRCSLRGHDHFALQRAYEDSYMIVTTAALDRERIP
EYNLTVVAEDLGSPPFKTVRQYTVRVSDENDNAPLFAKPLYEVAVPENNPPGAYITTVVA
RDPDLGHNGKVTYRLLETQVMGAPISTYVSVDPATGAIYALRTFNYEILKQLDLRIQATD
GGSPQLSSSTLVKVRMVDQNDNPPVIIHPVLTNGTAEIGVSSQTSRDSLVAQIKARDADD
GANAELTFAFLEEPQQDLFTINPTTGDIVLRGDLSEELGQLFKVILTVTDNGKPPLATTA
TVNFLVTATAPSSMQEIAKPSSWEGKALQWDIPLIVIIVLAGSCTLLLVAIITIATTCNR
RKKGNVIKTNSSLKDQIDISHLEKGHQEEGSQRGNVFEVRTFPSKTSFTSPDPSPAAEEI
STAESSSDSTCLYEGQKRLRGPSGEQGFTATPSYGKEPAPPVAIWKGHSFNTISGREAEK
FSGKDSGKGDSDFNDSDSDISGDALKKDLITHMQNGLWACTAECKILGHSDRCWSPSCGR
ANPHPSPHPSAPLSTFCKSTSLPRDPLRRDNFYQAQLPKTVGLQSVYEKVLHRDFDRTIT
LLSPPRPARLPDLQEIGVPLYPVPSTRYLGPQTDTAEKV
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcccgctgcggctgctggccgccgcctgcctgctggccctgtcccgcggcaag
acggtgaggtaccgcaccgacgaggagggcgcgccgggcacggtgatcggtactctggcc
gacgagatgccggtgaaggcgccgggggagatgagcttccggctgatgcggcagttcagc
aacagctcgctggtgcgggtgcgggaggaggacgggcagctgagcatcggtgaagcgggg
ctggaccgggagcggctctgcgggcaggccccccagtgcgtcctcgccttcgacgtggtg
agctgctggcgggagcgctaccgcctggtgcacgtggagctggaggtgcgcgacatcaat
gacaacgcgccgcgcttcccccgtgcccagatgacactggaggtgtcggagagcgccgca
cctggcactcgcctcccactggaggtggccgtggatgaggacgtgggttccaactccatc
caaagcttccaggtctccctcaacagccactttggcgtggaggcgcagacgcgggcagat
ggggcacgctgcgctgacctggtgctgctccaggagctggaccgtgagcgccagccgtcc
tacacgctggagctggtggccaaggacggtggcagcccagcacgctcgggcacggccact
gtgcatgtccgtgtcctcgacgccaatgacaacagccccgccttcgcccagggctcagtc
acggtggagctgcccgaggatgcaccacccggctccctgctgctcgatctggacgccgtc
gaccctgacgagggccccaatggcgaggtggtctacgccttcagcagccaggtgcccccc
gaggcgcggcggctcttccgcctcgacccacgctcaggccgcctcacgctggaggctgcc
gtggactatgagcgcacccgcacctacgagctggacgtgcgagcccaggaccgcggcacc
agccctcgtgccgccacctgcaccgtcgtcgtgcgcctcaccgatgtcaatgacaacgcg
ccgcgcatcagcatcagcgccctccgcggggctgccagcgctgccggtgtggcctacgtg
agcgaggcggcggccagcgagagctttgtggccctcgtcagcgcctcagaccgtgactca
ggtgccaatgggcaggtgcgctgcagcctccgtggccacgaccactttgccctgcagcga
gcctacgaggacagctacatgatcgtcaccacagcagcgctggaccgcgagcgcatcccc
gagtacaacctcactgtggtggccgaggacctgggctcaccacccttcaagaccgtccgc
cagtacacagtgcgggtgagcgatgagaatgacaacgcaccgctctttgccaagcccctc
tacgaggtggctgtgccagagaacaacccgccaggtgcctacatcaccaccgtggtggcc
cgtgaccccgatcttggccacaacggtaaggtcacctacagactcctggagacacaggtc
atgggggcccccatctctacctacgtatcggtggaccctgccaccggggccatctatgct
ctcaggacgttcaactatgagatcctcaagcagttggacctgaggatccaggccactgat
ggtggctccccgcagctgtccagcagcacccttgtcaaagtgaggatggtggaccagaat
gacaaccctcctgtcatcatccacccagtgctcaccaacgggacagcagaaattggcgtg
tccagccagacctctcgtgactccctggtggcccagatcaaagctcgagatgcagatgat
ggggcgaacgctgagctcacctttgccttcctggaagagccccagcaggacctcttcacc
atcaacccgaccactggggacattgtgctgaggggcgacctctctgaagaactggggcag
ctgttcaaggtcatcctcactgtgacggacaatggcaaaccccccctggccacaacagcc
acagtcaatttcctggtgactgccactgctccttccagtatgcaggagatagccaagccc
agctcctgggaaggaaaggctttgcagtgggacatccctctgatcgtgatcatcgtcctg
gcaggcagctgcaccctcctcctggtggctatcatcaccatcgccaccacctgcaacagg
cgcaagaaggggaacgtgatcaaaaccaactcatccttgaaggaccagatagacatctcc
cacctagagaagggccatcaggaggagggcagccagagggggaatgtgtttgaggtacga
acctttcccagcaaaacctctttcaccagccccgacccttctccagctgccgaagagatc
tccactgctgagagcagcagtgacagcacttgcctctatgagggtcagaagagactgaga
gggccgagtggggagcagggtttcactgccactccgagctatggcaaggagcctgctccc
cccgtggccatttggaaggggcactcgttcaacaccatctccggccgagaggcagagaag
ttcagtggcaaagacagcggcaaaggcgacagcgatttcaatgacagcgactcggatatc
agcggagatgccctgaagaaagatctcatcacgcacatgcagaatggtctgtgggcatgc
acggccgagtgcaagatcctgggccactcagaccgctgctggagcccctcctgcggccga
gccaaccctcacccttctccccatccctcggcacccctctccaccttctgcaagagcacg
tccctgcccagggatcccctgcgcagggacaacttttaccaagcccagctgcccaaaaca
gtggggcttcagagcgtgtacgagaaagtgctgcacagggactttgaccggacgatcaca
ctgctctccccaccgcgccccgcacggctccccgacctacaggaaatcggggtgcccctc
tacccagtcccctccactagatacctgggtccccagacggacacagctgagaaagtgtag
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