KEGG   Strigops habroptila (Kakapo): 115604301
Entry
115604301         CDS       T08851                                 
Symbol
PCDH8
Name
(RefSeq) protocadherin-8 isoform X1
  KO
K16499  protocadherin delta 2
Organism
shab  Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:shab00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:shab04515]
    115604301 (PCDH8)
Cell adhesion molecules [BR:shab04515]
 Cadherins
  Protocadherins
   115604301 (PCDH8)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th TMEM154
Other DBs
NCBI-GeneID: 115604301
NCBI-ProteinID: XP_030333144
UniProt: A0A672TRK4
LinkDB
Position
2:91643883..91648243
AA seq 999 aa
MRSPLRLLAAACLLALSRGKTVRYRTDEEGAPGTVIGTLADEMPVKAPGEMSFRLMRQFS
NSSLVRVREEDGQLSIGEAGLDRERLCGQAPQCVLAFDVVSCWRERYRLVHVELEVRDIN
DNAPRFPRAQMTLEVSESAAPGTRLPLEVAVDEDVGSNSIQSFQVSLNSHFGVEAQTRAD
GARCADLVLLQELDRERQPSYTLELVAKDGGSPARSGTATVHVRVLDANDNSPAFAQGSV
TVELPEDAPPGSLLLDLDAVDPDEGPNGEVVYAFSSQVPPEARRLFRLDPRSGRLTLEAA
VDYERTRTYELDVRAQDRGTSPRAATCTVVVRLTDVNDNAPRISISALRGAASAAGVAYV
SEAAASESFVALVSASDRDSGANGQVRCSLRGHDHFALQRAYEDSYMIVTTAALDRERIP
EYNLTVVAEDLGSPPFKTVRQYTVRVSDENDNAPLFAKPLYEVAVPENNPPGAYITTVVA
RDPDLGHNGKVTYRLLETQVMGAPISTYVSVDPATGAIYALRTFNYEILKQLDLRIQATD
GGSPQLSSSTLVKVRMVDQNDNPPVIIHPVLTNGTAEIGVSSQTSRDSLVAQIKARDADD
GANAELTFAFLEEPQQDLFTINPTTGDIVLRGDLSEELGQLFKVILTVTDNGKPPLATTA
TVNFLVTATAPSSMQEIAKPSSWEGKALQWDIPLIVIIVLAGSCTLLLVAIITIATTCNR
RKKGNVIKTNSSLKDQIDISHLEKGHQEEGSQRGNVFEVRTFPSKTSFTSPDPSPAAEEI
STAESSSDSTCLYEGQKRLRGPSGEQGFTATPSYGKEPAPPVAIWKGHSFNTISGREAEK
FSGKDSGKGDSDFNDSDSDISGDALKKDLITHMQNGLWACTAECKILGHSDRCWSPSCGR
ANPHPSPHPSAPLSTFCKSTSLPRDPLRRDNFYQAQLPKTVGLQSVYEKVLHRDFDRTIT
LLSPPRPARLPDLQEIGVPLYPVPSTRYLGPQTDTAEKV
NT seq 3000 nt   +upstreamnt  +downstreamnt
atgaggagcccgctgcggctgctggccgccgcctgcctgctggccctgtcccgcggcaag
acggtgaggtaccgcaccgacgaggagggcgcgccgggcacggtgatcggtactctggcc
gacgagatgccggtgaaggcgccgggggagatgagcttccggctgatgcggcagttcagc
aacagctcgctggtgcgggtgcgggaggaggacgggcagctgagcatcggtgaagcgggg
ctggaccgggagcggctctgcgggcaggccccccagtgcgtcctcgccttcgacgtggtg
agctgctggcgggagcgctaccgcctggtgcacgtggagctggaggtgcgcgacatcaat
gacaacgcgccgcgcttcccccgtgcccagatgacactggaggtgtcggagagcgccgca
cctggcactcgcctcccactggaggtggccgtggatgaggacgtgggttccaactccatc
caaagcttccaggtctccctcaacagccactttggcgtggaggcgcagacgcgggcagat
ggggcacgctgcgctgacctggtgctgctccaggagctggaccgtgagcgccagccgtcc
tacacgctggagctggtggccaaggacggtggcagcccagcacgctcgggcacggccact
gtgcatgtccgtgtcctcgacgccaatgacaacagccccgccttcgcccagggctcagtc
acggtggagctgcccgaggatgcaccacccggctccctgctgctcgatctggacgccgtc
gaccctgacgagggccccaatggcgaggtggtctacgccttcagcagccaggtgcccccc
gaggcgcggcggctcttccgcctcgacccacgctcaggccgcctcacgctggaggctgcc
gtggactatgagcgcacccgcacctacgagctggacgtgcgagcccaggaccgcggcacc
agccctcgtgccgccacctgcaccgtcgtcgtgcgcctcaccgatgtcaatgacaacgcg
ccgcgcatcagcatcagcgccctccgcggggctgccagcgctgccggtgtggcctacgtg
agcgaggcggcggccagcgagagctttgtggccctcgtcagcgcctcagaccgtgactca
ggtgccaatgggcaggtgcgctgcagcctccgtggccacgaccactttgccctgcagcga
gcctacgaggacagctacatgatcgtcaccacagcagcgctggaccgcgagcgcatcccc
gagtacaacctcactgtggtggccgaggacctgggctcaccacccttcaagaccgtccgc
cagtacacagtgcgggtgagcgatgagaatgacaacgcaccgctctttgccaagcccctc
tacgaggtggctgtgccagagaacaacccgccaggtgcctacatcaccaccgtggtggcc
cgtgaccccgatcttggccacaacggtaaggtcacctacagactcctggagacacaggtc
atgggggcccccatctctacctacgtatcggtggaccctgccaccggggccatctatgct
ctcaggacgttcaactatgagatcctcaagcagttggacctgaggatccaggccactgat
ggtggctccccgcagctgtccagcagcacccttgtcaaagtgaggatggtggaccagaat
gacaaccctcctgtcatcatccacccagtgctcaccaacgggacagcagaaattggcgtg
tccagccagacctctcgtgactccctggtggcccagatcaaagctcgagatgcagatgat
ggggcgaacgctgagctcacctttgccttcctggaagagccccagcaggacctcttcacc
atcaacccgaccactggggacattgtgctgaggggcgacctctctgaagaactggggcag
ctgttcaaggtcatcctcactgtgacggacaatggcaaaccccccctggccacaacagcc
acagtcaatttcctggtgactgccactgctccttccagtatgcaggagatagccaagccc
agctcctgggaaggaaaggctttgcagtgggacatccctctgatcgtgatcatcgtcctg
gcaggcagctgcaccctcctcctggtggctatcatcaccatcgccaccacctgcaacagg
cgcaagaaggggaacgtgatcaaaaccaactcatccttgaaggaccagatagacatctcc
cacctagagaagggccatcaggaggagggcagccagagggggaatgtgtttgaggtacga
acctttcccagcaaaacctctttcaccagccccgacccttctccagctgccgaagagatc
tccactgctgagagcagcagtgacagcacttgcctctatgagggtcagaagagactgaga
gggccgagtggggagcagggtttcactgccactccgagctatggcaaggagcctgctccc
cccgtggccatttggaaggggcactcgttcaacaccatctccggccgagaggcagagaag
ttcagtggcaaagacagcggcaaaggcgacagcgatttcaatgacagcgactcggatatc
agcggagatgccctgaagaaagatctcatcacgcacatgcagaatggtctgtgggcatgc
acggccgagtgcaagatcctgggccactcagaccgctgctggagcccctcctgcggccga
gccaaccctcacccttctccccatccctcggcacccctctccaccttctgcaagagcacg
tccctgcccagggatcccctgcgcagggacaacttttaccaagcccagctgcccaaaaca
gtggggcttcagagcgtgtacgagaaagtgctgcacagggactttgaccggacgatcaca
ctgctctccccaccgcgccccgcacggctccccgacctacaggaaatcggggtgcccctc
tacccagtcccctccactagatacctgggtccccagacggacacagctgagaaagtgtag

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