Strigops habroptila (Kakapo): 115604328
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Entry
115604328 CDS
T08851
Symbol
BOC
Name
(RefSeq) brother of CDO isoform X1
KO
K20020
brother of CDO
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115604328 (BOC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shab04515
]
115604328 (BOC)
Cell adhesion molecules [BR:
shab04515
]
Immunoglobulin superfamily
Other
115604328 (BOC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
FN3_DSCAM-DSCAML_C
ISET-FN3_linker
Ig_VEGFR-1-like_5th
Pur_ac_phosph_N
V-set
Fn3_ROS1
C2-set_2
Fn3_VIN3
Ig_4
C1-set
Ig_5
Y_Y_Y
DUF7042
Motif
Other DBs
NCBI-GeneID:
115604328
NCBI-ProteinID:
XP_030333192
UniProt:
A0A672TP80
LinkDB
All DBs
Position
2:21297478..21353111
Genome browser
AA seq
1104 aa
AA seq
DB search
MTRGKKRPMSAIPCLILAAASCFARLSESLQVTVQPASIVQKLGGPVSLGCVVDPPRVNL
TWRLNGRELAGSDKVLGIHIERGKLVITALNNHTVGRYQCIARVPEGVIASVPAVVTLAN
LKDFKFDGQHVIEVDEGNTAVIACDLPESHPKAQVRYSVKQEWLEASRDNYLIMPSGNLQ
IVNASQEDEGTYKCAAYNPVTQEVKTSVSSERLRVRRSTAEAARIIYPPEAQTIIVTKGQ
SLILECVASGIPPPRVTWAKDGSSVSAYNKTRFLLSNLLIDPTSEEDSGTYSCTADNGVG
ETGAAFIFYNVQVFEPPEVTMELSQQIIPWGQSAKFTCEVRGNPQPSVVWLRNAVPLSGG
PRLRLSRRALRLVSVGPEDDGIYQCMAENEVGSAQAMVQLRTARPGATLNPGRDAQLGSA
QPPTPASRDSALKLPLDKAGLPKTGTTPLTASPQCAANRETVSPAEAPIILSSPRTSKTD
SYDLVWRPRPDSRAPILYYVVKHRKQVTNASDSWAVRDVPASQHRLTLTRLDPGSLYEVE
MAAHNCAGEGQTAMVTFRTGRRPKPEIVASKEQQIQRDDPGTSTQSSNQSDNSRLSPPEA
PDRPTISMASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKLGDWVLATSDIPPSRLSVEI
PGLEKGTSYKFRVRALNILGESEPSAASRPYVVSGYSNRVYERPVAGPYITFTDAINETT
IMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDVVEGDRYWHSISHLQPETSYDI
KMQCFNEGGESEFSNVMICETKARKSLGLPGRLPPSTVPPQQHPPLSGGHSGLGAGAMVA
RSSDLPYLIVGVVLGSIVLLIVAFIPFCLWRAWSKQKQTIDMGFPGAGLLVSSCQYTMVP
LRGISAPRANGHPYINGQPYANGAHLNGICPSAGVGYASTKPREYSPDEVPQSHEETNTL
LQARVLQNGNVQQEYQPSRLPNPRTEDSSFLYNLPDDSTHQLLQPQDDCPHLQEHFVGLH
HPVMSSKVGGPSLDARRDPLFHQGSPCCLGLVPVEEVERLDCCQPRGDLHPPNPAISSLG
QDLPRHLNSSPPPLRPLETHSSAS
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgacacgtggaaagaagagacccatgtccgccatcccttgcctcatcctcgcagccgct
agctgctttgccagactgagtgaatctctgcaggtcacagtgcaacctgcctccattgtc
caaaagcttgggggtccagtcagcctggggtgtgtggtggatccccccagagtgaacctt
acctggaggctgaacgggagggagctggctggatcggacaaagtgctgggcatccacatt
gagcgagggaagctcgtcatcacagctctcaacaaccacactgtggggcgataccagtgc
attgctcgagtgcctgaaggagtcattgccagtgtccctgcagtggtcacgttagctaat
ctcaaagatttcaagtttgacggccagcatgtgatcgaggtggatgaagggaacacggcc
gtgatcgcctgtgacctgcccgaaagtcaccccaaggcccaggtccgctacagcgtgaag
caggagtggcttgaggcctcccgagacaattaccttatcatgccatccgggaaccttcag
atcgtcaatgccagccaggaggatgaggggacttacaaatgtgctgcctacaaccctgtg
acacaggaggtgaaaacctctgtctccagtgagaggctccgtgtgagacgctccacagcg
gaggcagcccggataatctacccccctgaagctcagaccatcattgtcaccaagggccag
agcctcatcctggagtgtgtggccagcgggatccccccgccgcgagtcacctgggccaaa
gacggctccagcgtctccgcgtacaacaagacacgcttcctgctcagcaacctcctgatt
gaccccacgagtgaggaggactcgggcacctacagctgcacggctgacaatggggttggg
gagactggagctgcattcatcttctacaatgtgcaggtgtttgaacccccagaggtcacc
atggagctgtcccagcagatcatcccctggggccagagcgccaagttcacgtgcgaggtg
cgagggaacccgcagccctcggtcgtgtggctgcgcaacgccgtgcccctgtccggcggc
ccgcggctccggctgtcgcgccgggcgctgcgcctggtcagcgtggggcccgaggacgac
ggcatataccagtgcatggcggagaacgaggtcggcagcgcgcaggccatggtgcagctg
aggacagcccggccgggagctacactcaaccctgggcgagatgctcagctgggctcagct
cagcctccaaccccggcttccagggacagtgccttaaagctgcccctggataaagctgga
ctgccaaagactgggacaaccccgctgacggcatctccacagtgtgcagccaacagggaa
acggtgtctccagctgaggcccccatcatcctcagctctccacggacatccaagacagac
agctacgatctggtgtggagaccccggcctgacagcagagcccccatcctctattatgtg
gtgaagcatcgcaagcaggtcaccaacgcctcggacagctgggcagtgagggacgtccca
gcctcgcagcaccgcctgaccctcaccaggctggaccctggcagcctctacgaggtggag
atggctgctcacaactgtgccggcgagggacagacggccatggtgaccttccggactggc
cggcgcccaaaaccagaaattgtcgccagcaaagagcagcaaatccagagggatgaccca
ggcacaagcactcagagcagtaaccagtctgacaacagccgtctgtcccctccagaggca
ccagaccgtccaaccatctccatggcatcagagacatccgtgtacgtgacgtggatcccc
cgtgggaatggtgggttccccatccagtctttccgtgtggaatacaagaaactgaagaag
ttgggagactgggtcctggccaccagtgacattcctccctctcgcctctctgtggaaatc
ccaggcttggagaaaggcacatcctataagttccgtgtccgggcactgaacatcctggga
gagagtgagcccagtgcagcgtctcggccgtacgtggtgtctgggtacagcaaccgagtc
tacgagcgccctgtggctgggccatacatcaccttcacggatgccatcaacgagaccacc
atcatgctgaagtggatgtatatcccagccagcaacaacaacactcccatccatggtttt
tacatctactaccgccccactgacagtgacaatgacagtgactacaagaaggatgtggtg
gaaggagatcggtactggcactccatcagccacctgcagccagagacctcgtatgacatt
aagatgcaatgcttcaacgagggtggtgaaagcgagttcagcaacgtgatgatctgtgaa
accaaagctcggaagtcccttggtctgccgggtcgtcttccaccctccacagtgcccccc
cagcagcatcccccgctcagtggtggacacagtggcctgggggcaggagccatggtggcc
cgttccagcgacttgccgtacttgattgtaggcgttgtgctgggctctatcgtactcctc
atcgtggctttcatccccttttgcctttggagagcctggtccaagcagaagcaaaccatt
gacatgggcttcccaggagctgggctgctggtctcgtcctgccagtacaccatggtgcct
ctgaggggcatctctgctcctcgtgccaatggacatccctatattaacgggcagccctat
gccaacggggcacatctgaatggcatctgcccctctgcaggagtgggatatgcaagcacc
aagccccgagagtacagtccagatgaagtgccacagtcgcacgaggagaccaacactttg
ctgcaggcgagagtgctccaaaacgggaatgtccagcaagaataccagccctccaggttg
cccaacccaagaacagaagacagctcattcctttacaatctcccagatgactccactcac
caacttcttcagccgcaagatgactgtcctcaccttcaagagcactttgttggtctccat
catccagtgatgagcagcaaagtgggaggccccagcctggatgctcgacgggatcccctg
ttccaccaaggaagcccttgctgcctcggcctagtgccagttgaagaggtagaaagacta
gactgctgccagcccagaggagatctccatcccccgaatccagcgatctcctctttgggt
caggacctaccaagacacctgaacagcagcccgccaccactgaggcccttagagactcat
tcttctgccagctag
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