Strigops habroptila (Kakapo): 115604456
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Entry
115604456 CDS
T08851
Name
(RefSeq) FRAS1-related extracellular matrix protein 2-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115604456
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
shab04091
]
115604456
Lectins [BR:
shab04091
]
C-Type lectins
Lecticans
115604456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
HYR
Motif
Other DBs
NCBI-GeneID:
115604456
NCBI-ProteinID:
XP_030333441
LinkDB
All DBs
Position
2:complement(97549323..97559679)
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AA seq
1751 aa
AA seq
DB search
MQALPAALRWLLAGLLLLTGCVWVASSEPPPGSAVVALPWALEAAPVVVANRGLRVPLGR
SAWLDPTRDLVLQVQPGDRCYLTVLDEDPLWQRPGRLSPRRFPCDFGAREVQYSHLGGRS
PARDRVRLQLRYDSPSRALVLPLVLEVEVLFTQLEIVTRNLPLTVERLRGTSNPLDARSL
EFAFEPGRQRCRVGLLPPLAGLPRYGEILNYPAAAAPAAAAAAGGEAAAGGPVPASMWDC
EEFLRLGLRYRHTATGGSPNRDLVPLVAELREAAGGGALLKREYFQVLVRIRAGTENAAP
KPSFFAMLMMEVDQFVLTALTPDMLAAEDTESSPDLLLFNITSPFSPGQGHMVSTDDRSL
PVSSFSQRDVRELRIAYQPPMEDSDQERLFELELEVLDPEGAASEPFTFVIVVKPMNTLA
PVVTRNTGLVLYEGQSRPLSGPGPNPNLVISDEDDLEQVQVSVVAGLRHGHLTLLEDTAA
PAAPRKHFTVAELAAGRVIYQHDGSESPLSDNLVLRLEDGGSRHRVEFLFPITVMPTDDE
PPLLNANTGLAMAEGETVPITTRALSATDIDSQDAILLFTVESGPTAGQLLLRQAQPPPG
WEEEEEDEGFSWRRVPGLAGSSVIYEKPVREWLQQDIVEGRLYYHHFGPHSPGPGVVLDQ
FVFRVQDDNDPPNRSGPQTFVIRVHPIDRLAPELHSSSSLHLIVAEQQVTPLRRKHLCYT
DQDSGDREIHYTITQPPTDTNHPPDVYGARLGSLVLTEDHTVEVTHFTQAQINHHKISYR
PPQEELGVAPHLIQFQYRVQDAAGNAAEGTFTIYLRPVDNQPPEITNTGFTLPEGGSHVL
SPTELDASDTDTELAHLRFILTQAPRYGQLQLSGYSLIPGGVFGLDDIRQGRVVYVHSGA
ETNSDTCRLDVSDGVHFVPITLKMNVHPVDDEVPTLRLPPGTVGSYLDVLENGAAEITAN
VIQGTDEDTDDLMLTFIVEDPPQHGNILVQGVPAERFSQRDLLDGGVVYVHTGGEIGLLP
KLDTFNLTLSDLSEEWNVRGNVVQGVSVLVTILPVDSQAPEIFVGEQFMVMEGGKQVITP
AHLRAEDVDTPNDDILCTIVAQPTSGYVENISPAPGSEKSRAGVAISAFTLKDLRQGHIF
YVQSIHKGVEPVEDRFAFRCSDGINFSPKHFFPIVIMPINDEEPEIFVREFVVMEGMSLV
VDTPILNAADADIPADELMFTVTRLPRHGHIVNQLVNGTVLVESFTLDQITESSNILYEH
DDSETKEDSFEVTLTDGKHTIRKTVFIMVIPVDDETPRMAINDGLEIEIGETRTIHNRIL
KATDLDSEDKTLTYIIRYGPGQGLLQRIKPSGGVENITLGMNFTQDEVDRNLIQYMHFGQ
GGVRDLIKFDVTDGINPLIDRYFYVTIGSIDVVFPDVISKGVSLKEGGKVTLTTDLLSTS
DLNSPDENLVFTITRAPVRGHLECTDQPGVPISTFTQLLLAGNKVYYIHTSEDEVKMDSF
EFEVTDGYNPVFRTFRISISDVDNKKPVVTIHSLVVSENECKLITPFELTAEDRDTPDAL
LKFIITQIPVHGQIMFNNSKPVTIFTKQDLNENLISYKHDGTESVEDSFSFTVTDGTHTD
FYVFPNTVFETRKPQTMKIRIMAVDNSVPQIVINKGAQTLRILATGHIGFLITNKVLKVE
DRDSLHVTLKIRITEGPRHGFLIHLGKGNHSISQFTQADIDDMKICYVLRGGDNATSDIF
HFMVEDGGEYS
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctctccccgccgcgctgcggtggctgctggccggcttgctgctgctgaccggc
tgcgtctgggtcgcgtcgtcggagccgccgccaggcagcgccgtagtcgccttgccctgg
gcgctggaggcggcccctgtcgtggtggcgaaccgcggactgcgggtgcccctcggccgc
tccgcctggttggaccccacgcgggacctggtgctgcaggtgcagccaggtgaccggtgc
tacctcaccgtgctggacgaagacccgctgtggcagcgcccgggccggctgagcccccgg
cgcttcccctgcgacttcggggcccgtgaggtgcaatactcccacctgggcggccgcagc
cctgcgcgggaccgcgtccgcctgcagctgcgctacgactcgccgagccgcgccctggtg
ctgcccctggtgctggaggtggaggtgctcttcacccagctggagatcgtcacccgcaac
ctgcccctcactgtggagcgcctgcggggcaccagcaacccgctggacgctcgcagcctg
gagttcgccttcgagccgggccggcagcgctgccgggtgggcctgctgccgccgctggcc
gggctgccccgctacggagagatcctcaactatcccgcggcggcggctccggcggctgcg
gccgccgcgggtggggaggcagcggcgggcggcccggtgcccgcctcgatgtgggactgt
gaggagttcctgcgcctggggctgcgctaccggcacacggccaccggcggctcccccaac
cgtgacctggtgccgctggtggcagagctgcgggaggcggcaggcggtggggcactgctg
aagcgtgagtacttccaggtgctggtgcggatccgggccgggactgagaatgcggccccc
aaacccagcttctttgccatgctcatgatggaggttgaccagtttgtcctcaccgcgctc
acacccgacatgctggcagctgaggataccgagtcatcaccagacctgctgctcttcaac
atcacctctccctttagccctggccagggccacatggtcagcacagatgaccggagcttg
ccagtttcttctttcagccaacgggatgtaagggagctgcgcattgcctaccagcccccc
atggaggactcagatcaggagcggctctttgagcttgagctggaggtgttggacccagag
ggtgctgcctcagagcccttcacctttgtgattgtggtgaagcccatgaacaccctggca
cctgtggtgacccgtaacactggccttgtgctctatgaggggcagtcacggcctctctca
ggccctggtcccaaccccaacttggtgatcagtgatgaggatgaccttgagcaggtgcag
gtgagcgtggtggcagggctaaggcatggccacctcactctcctcgaggacaccgcagca
cctgctgcccctcgtaagcatttcacagtggctgagctggcagcaggccgggtcatttac
cagcacgatggcagcgagtctccactcagtgacaacctggtgctgcggctggaagatggt
ggctctcgccatcgtgttgagttccttttcccaattaccgtcatgcccactgatgacgag
ccacccctactcaatgctaacacaggcctggccatggctgagggtgaaacagtgcccatc
accacccgtgctcttagtgccactgacattgactctcaggatgccatcctgctcttcaca
gtggagtctggccccactgcagggcagctcctcctccgtcaagcacaaccacctcctggc
tgggaagaggaggaagaagatgagggattttcttggaggagggtgccaggtttagcaggg
agctctgtaatctatgaaaagccagtgagagagtggttgcagcaggatattgttgaaggg
cgtctctattatcaccactttgggcctcacagccctggccctggggttgtgttggaccag
ttcgtctttagagtccaggatgacaatgacccacccaaccgctctggaccacaaactttt
gtgatccgggttcatcccatagacagattagcccctgaactgcatagcagcagcagcctg
cacttaatagttgcagagcagcaggtgaccccgctgcggaggaagcacttgtgttacaca
gatcaggattcaggggatcgtgaaatccactacacaataactcagccccccactgacact
aaccatcctccagatgtatatggagcccgccttggatcccttgtgctgaccgaggatcac
actgtggaagttacccacttcacccaagcccagatcaatcatcacaagatctcgtaccgt
cccccacaggaagaactgggggtggctcctcatttgattcagtttcaatatcgagtgcaa
gatgcagctggcaatgcagctgaagggactttcaccatctatctgcggcctgtggataac
cagcctcctgaaatcactaatactggcttcactttgcctgagggaggcagccatgtcctt
agtcccactgagctggatgccagtgacacggacactgaacttgcccatctcagatttatc
ctgacccaggctcctcgttatggccagttgcaactttctggatacagtttgattccggga
ggtgtctttggtctggatgatatcagacaagggagggtggtgtatgtgcacagtggagct
gagaccaacagtgatacctgcaggcttgatgtgagtgatggggttcattttgtgcccatc
acattgaaaatgaacgtacacccagttgatgatgaggttcctacactacggttgccccca
ggcactgttggttcctacctggatgtgctggagaatggtgctgcagaaatcactgctaat
gtcattcagggcacagatgaggatacagatgacttaatgttgactttcattgtagaggat
cctcctcagcatgggaacatcctggtccaaggggtgcctgcagagagattttcccagaga
gatctgctggatggtggtgtggtatatgttcacactggtggtgaaataggccttctgccc
aaattagataccttcaatcttaccttgtctgacctgtctgaggagtggaatgtcaggggc
aatgttgttcaaggagtttcagtcttggtgaccattcttcctgttgacagtcaagcccca
gagatttttgtgggggagcagttcatggtaatggaaggtggaaaacaggtcattactcct
gctcacctcagggctgaagatgtggatactcctaatgatgatatactttgcaccattgtt
gctcagcccacatctgggtatgtagagaacatatctccagccccaggatctgaaaaatcc
agagcaggtgtagctataagtgcttttaccttgaaagacctccgtcaagggcatattttt
tatgtccaaagtatacataagggtgttgagcctgttgaagacagatttgctttccgctgt
tctgatggcattaacttttccccaaagcattttttccccattgttattatgccaatcaat
gatgaagagcctgaaatctttgtgcgagagtttgttgtgatggaaggcatgagcctggtt
gtcgatacccctattctcaatgcagctgatgcagacatccctgctgatgaattaatgttc
acagtcaccaggcttcccaggcatggccacattgtgaaccagctggtgaacggaactgtc
ctagtggagagcttcaccttggatcagataacagagagctccaacatactgtatgaacat
gatgactctgagacaaaggaggacagttttgaggtaacactcacagatggtaaacatacc
attaggaaaacagtattcatcatggttattcctgtagatgatgagacacccagaatggcc
atcaatgatggtttggagattgaaataggggaaactagaactattcataacagaatattg
aaggctactgacctggattctgaagacaaaaccttgacatacattataagatatgggcca
ggacaaggcctcctgcagagaatcaagccttcaggtggagttgagaatatcaccctcggg
atgaacttcacccaagatgaagtggatagaaacttaattcagtatatgcattttggccaa
gggggagttcgtgatcttatcaagtttgatgtgacagatggaataaatccactcattgac
cgctacttttatgtcacaataggtagcattgatgttgtcttcccagatgtaatcagcaaa
ggagtttctttgaaggaaggagggaaggtaactctaactactgatttgcttagcaccagt
gacctgaatagtccagatgagaacttagttttcactattaccagagcacctgttcgtggt
catcttgaatgcacagatcagcctggggtacccatctccacttttactcaactcctatta
gcaggcaataaagtctattacatccacacttcagaagatgaggtgaaaatggacagcttt
gagtttgaggtgactgatggctataatcctgtgtttcgtactttcaggatttctatcagc
gatgtggacaataagaaacctgtcgtcacaatccacagcctggtggtgagtgaaaatgaa
tgcaaactgataaccccatttgaactgactgcagaagacagagatacacctgatgcattg
ctaaaatttatcatcactcaaataccagttcatggtcagatcatgttcaataactccaaa
ccggtcaccatcttcactaaacaagatctaaacgaaaatctaatcagctacaaacatgat
ggcacagaatcagttgaggatagcttctctttcactgttacagatggcactcatactgat
ttctacgtcttccccaataccgtgtttgaaacaaggaaacctcagactatgaagattcga
ataatggctgtggacaacagtgtacctcaaattgtaataaataagggtgctcagactctc
cgtattctggccacaggtcacatcgggtttctgattaccaacaaggtgctcaaagtggaa
gacagggacagtttacatgttactcttaagatcagaatcacagagggtccacgccacggc
ttcctgatccatctggggaaaggcaaccatagcatcagtcagttcacccaagctgatatt
gatgacatgaagatatgctatgttttacgagggggtgacaatgccaccagtgacattttt
catttcatggttgaagatggtggtgagtattcataa
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