Strigops habroptila (Kakapo): 115604534
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Entry
115604534 CDS
T08851
Symbol
ZBED1
Name
(RefSeq) zinc finger BED domain-containing protein 1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shab03000
]
115604534 (ZBED1)
04121 Ubiquitin system [BR:
shab04121
]
115604534 (ZBED1)
Transcription factors [BR:
shab03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
115604534 (ZBED1)
Ubiquitin system [BR:
shab04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
115604534 (ZBED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
hAT-like_RNase-H
PRRSV-NSP11_N
Motif
Other DBs
NCBI-GeneID:
115604534
NCBI-ProteinID:
XP_030333596
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All DBs
Position
2:53348513..53405671
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AA seq
695 aa
AA seq
DB search
MENKSLEGSPSDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPDEFCEFVKSNTEQMREAFATAFSKIKPESSQQVVQDSLIMKTYQNYEN
KKHQELTSAVISLICEGMYPASIVDEPTFKALLRTADPRYELPSRKYFCTKAIPEKYNAI
REIVLKELTEVLWCGISTDMWRSENQNRSYVTVAVHFLSSSPANCLAVNSRCLKTFEVPE
DNTAETITRVLYETFIEWGINTKVFGATTDYSKDIVKACSLLDIPVQMPCLGHTFNAGIQ
QAFQLPKLCSLLARCRKLVEYFQQSTVAMYMLSEKQKQQNVLHCMLVSDRVSWWGSTLAM
LQRLKEQQFVIAAVLVEDSNNHHLMLESSEWNTIEGLVELLQPFKQVAEMMSASKYPTIS
MVKPLLHMLLNTTLNIKENDLKEISMAKEVIAKELSTTYQHTPEIDMFLNVATFLDPRYK
KLPFLSAFERQQVENRVVEEAKSLLEKVKENTFRTEEKFFTVSEEPPVKKIIISSTPPPT
SVINNMLAEIFCQTGGVEDQEEWHAQIVEELSNFKSQKVLGLNEDPLKWWSDRLALFPVL
PKVLQKYWCILATRVFPERLFGSSANVVSAKRNRLAPAHVDEQIFLYENSRNGSEAELED
EDEGEWGLEQEQIFNLNDSVNVNNNFFNIRDSGFV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaaagtttagaaggttccccatcagacctaaagttagtggctcacccaaga
gcaaagagtaaagtgtggaagtactttgggtttgataccaatgcagaaggatgcatattg
cagtggaagaagatctactgccgtatttgcatggcacagatcgcctattcaggaaacacg
tccaacctttcctaccaccttgagaaaaaccaccccgacgaattctgtgaatttgtgaaa
agcaacactgagcagatgagggaagcctttgccaccgccttttcaaaaatcaagccggag
tcatcgcagcaggttgttcaagatagtctcatcatgaagacctaccagaactatgaaaat
aaaaagcaccaggaactgacatctgcagtcatcagcttaatttgcgagggcatgtatcca
gcctctattgttgatgagcccaccttcaaggccctcttgagaacagcagaccccaggtat
gaacttccgagccggaagtacttctgtacaaaagctattcctgaaaagtacaatgccatt
agagaaattgtgctgaaagagctcaccgaggttctatggtgtggcatatccacggacatg
tggaggagcgaaaaccagaacaggtcgtacgtaacggtcgccgttcactttctcagcagc
agtcctgccaactgcctggctgtgaactcacggtgtttaaaaacgtttgaagtaccagag
gataatactgcagagactattacacgagtcctttatgaaacgttcattgagtgggggatc
aatacaaaagtctttggtgctacgacagattacagtaaagacattgtgaaagcttgctct
ctcctagatattcccgtacagatgccttgtttagggcacacttttaatgcaggaatacaa
caagcttttcagctccccaaactttgcagccttcttgccaggtgccgaaaactggtggag
tattttcagcagtccacggtcgcaatgtacatgctgagcgagaagcagaagcagcagaac
gttctccactgtatgctggtaagtgaccgtgtttcgtggtggggaagcacgcttgctatg
ctgcagcgcctcaaggagcagcagtttgtcattgcagctgttcttgtggaggacagcaac
aaccatcacctcatgctggaatccagtgagtggaatacaattgaagggctggtggagctg
ctgcagcctttcaagcaggttgcggagatgatgtctgcttcaaagtacccaacaataagt
atggtgaagccacttctccacatgcttctgaatactaccctgaacatcaaagagaatgat
ttgaaagaaatcagcatggcaaaggaggtgattgctaaagagctgtcaaccacctaccag
cacacgcctgagatagacatgtttctcaacgttgcaactttcttggatccccgctacaaa
aaactgccttttctgtcagcctttgaacggcagcaggttgaaaacagagtggtggaagaa
gcaaaaagcctgctggagaaagtaaaagaaaatacttttaggactgaagagaaattcttt
actgtttcggaagagccccctgtgaaaaagatcatcatctcctctactcctcctcctacc
agtgtcatcaacaacatgctggcagagatcttttgccagacgggaggtgtggaagaccag
gaggaatggcatgctcaaatcgttgaggagttgagcaacttcaagtcgcaaaaggtcctg
ggtttgaacgaagacccgctgaagtggtggtctgacagactagcgctgtttccagtttta
ccaaaggttcttcaaaaatactggtgtattctggccacaagggtcttccctgaacgcctt
tttggttcttctgctaatgttgtaagtgcaaagagaaaccggttagctccggctcatgtg
gatgagcagatttttttgtacgaaaacagtcggaatgggtctgaggcagaactggaggat
gaagatgaaggagagtggggtttggaacaggaacagatttttaatttaaatgactcggta
aatgtaaacaacaatttctttaatatccgagacagtgggtttgtttaa
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