Strigops habroptila (Kakapo): 115604611
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Entry
115604611 CDS
T08851
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
shab03037
]
115604611 (IFT88)
Cilium and associated proteins [BR:
shab03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
115604611 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_8
TPR_19
TPR_6
TPR_14
TPR_16
TPR_11
ANAPC3
TPR_17
TPR_10
ARM_TT21_4th
TPR_15
ARM_TT21_5th
TPR_CcmH_CycH
HEAT_Nup120
BTAD
DUF2989
HAT_PRP39_C
Coatomer_E
DUF6584
ARM_TT21_C
ARM_TT21_2nd
Ble-like_N
Motif
Other DBs
NCBI-GeneID:
115604611
NCBI-ProteinID:
XP_030333788
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All DBs
Position
2:complement(105267485..105312364)
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AA seq
816 aa
AA seq
DB search
MMQNVHLAPDADEDDLYSGYNDYNPTFDTEDLENDVAFQQVARTSHGRRPPGTAKIPGTP
ASRPLATGFGSKATLTSSMGRPMTGAIQDGVARPMTAVRAAGYTKAAMRGSPFDPLGQRR
GPAPPLEAKNVDSAEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAREAGRKERVLVR
QREQIASPENLDLTYSVLLNLACQYAANGMYAEALNSYQVIVKNKLFTSGGRLKVNMGNI
YLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMENIGVAFIKTGQYTDAISSFELIMSMS
PNLKTGFNLILCYFAIGNCEQMKKAFQKLIAVPCEVDYDDKYVSPNDDPHTNLLIEAIKN
DSLGQMERERKSMAEEYIMTAAKLIAPVIETSFAVGYDWCVEAVKTSQYVELANDLEINK
ATTYLRQQDFNQALETLKMFEQKDSNVKSAAATNLSFLYYLENELAQAANYADLAVISDR
YNPAALTNKGNTIFAKGDYEKAAEFYKEALGNDSSCTEALYNLGLTYKKLNRIDEALDCF
LKLHAILRNSAQVLHQIANIYEIMGDPNRAIEWLLQLISVVPTDPHVLSKLGKLYDNEGD
KSQAFHYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQEKWQLMVA
SCYRRSGNYQKALEKYKVIHRKFPENIECLRFLVHLCTDMGMKEVQEYMTKLKKVEKLKE
IREQRIKSGRDGSARSRREGNASGDSGGTKGERLNARLKAFPETSEPYESSVCKEIDVSY
IDPLGPQAERPKTAARKRAEEDDFADEELGEDMLPE
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcatctggctcctgatgctgatgaagatgatctctattctggctac
aatgattataatcctacgtttgacacagaggatttagaaaatgatgtagcttttcaacag
gtggcaagaacgagtcatggtagaagaccccctgggacagccaaaattcctggtacacca
gcttcaagacctttagctactggatttgggtcaaaggcaaccttaacttcgtctatggga
agaccaatgacaggagctatacaggatggggttgctcgaccaatgacagcagtgcgtgcc
gcaggttacactaaggcagctatgagaggttctccatttgatcctcttggccaaagaaga
ggtcccgctccacctctggaagcaaaaaatgtagacagtgcagaagagaagattaggcag
ttggaaaaaaaagtgaatgaactggttgaagaaagctgcattgccaacagctgtggagac
ttgaaattggctctggaaaaagcaagagaggctgggaggaaggaaagagtgttggtgaga
caacgtgaacaaattgcttctccagaaaacttagacctcacttactcagttcttttaaat
ctggcctgtcagtatgctgcaaatggaatgtatgcggaagcactgaatagttaccaagtt
atagtgaagaataagttgttcaccagtggaggtagactgaaggtcaatatgggaaatata
tatttaaaacaacggaactattccaaagctatcaaattctaccgtatggctctagatcag
attcctagtgtccacaaagagatgaggattaaaataatggaaaatattggagttgcgttt
attaaaactggccaatacactgatgccatttcttcatttgaacttataatgagcatgtcc
ccaaacctaaagacaggcttcaacttgatcctgtgttattttgctattggaaactgtgag
caaatgaaaaaagccttccaaaaattgattgcagttccctgtgaagtggattacgatgac
aaatacgtttcaccaaatgatgatccacatacaaatctactgatcgaagctattaaaaat
gacagcttaggacaaatggaacgtgagaggaaatctatggcagaggaatacatcatgaca
gctgctaaactcattgcaccagtaattgagacatcttttgcagtgggctatgactggtgt
gttgaagcagtaaaaacttcccaatatgtagagttagccaatgacctggaaataaataaa
gccactacttacttgaggcagcaggattttaaccaggcactggagactttaaaaatgttt
gagcaaaaggatagcaatgtaaagagtgcagcagcaacaaacctttcattcctttattat
ttggagaatgaattggcgcaagcagctaactatgcagatttagctgtaatttctgatagg
tacaatccagcagctttaactaacaaaggaaatactatttttgcaaaaggagactatgaa
aaagcagctgagttttataaggaagctctcgggaacgattcctcatgcactgaagcactc
tataatcttggtttaacatacaagaagttaaacagaatagatgaagctttggattgtttt
ctgaaactccatgcaatccttcgaaatagtgcccaagtccttcaccagatagcaaacata
tatgagatcatgggagatcccaatcgagccatagagtggctcctgcagttgatcagtgta
gtaccaactgatccgcatgtactttcaaagctagggaaattatatgataatgaaggggat
aaatcccaagcttttcattattactatgagtcataccggtatttcccttcaaacattgag
gtcattgaatggcttggagcctattacattgacacccagttttgtgaaaaagccattgag
tactttgaaagagcagcacttatcctaccaacacaagagaagtggcagctgatggttgcc
agttgctacaggagaagtggtaactaccagaaagctctagagaaatataaagtcattcac
agaaaattcccagagaacattgaatgcctccgatttttagttcatctttgcacagatatg
ggtatgaaagaagtccaggaatacatgacaaagctcaagaaagtggaaaaattaaaagaa
ataagagagcagcgcattaaatctggcagagatggcagtgcacgtagccgcagagaagga
aatgctagtggtgatagtggtggtaccaaaggggaaaggctgaatgccagactaaaagct
tttcctgaaacaagtgaaccctatgaaagcagcgtctgtaaagaaatagatgtctcctac
atagatccacttggcccacaagcagaaagaccaaaaactgctgcaagaaaaagagctgag
gaagatgactttgctgatgaagaactaggagaggatatgcttccagagtag
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integrated database retrieval system
