Strigops habroptila (Kakapo): 115604810
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Entry
115604810 CDS
T08851
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115604810 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shab03019
]
115604810 (CNOT2)
Messenger RNA biogenesis [BR:
shab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115604810 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115604810 (CNOT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
115604810
NCBI-ProteinID:
XP_030334094
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All DBs
Position
3:37972164..38064693
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AA seq
536 aa
AA seq
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MFGASRKKFVEGVDGDYHDENMYYSQSSMFPHRSEKDAMLQKWILEWDFKRRKMLASPST
SGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTP
PSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQ
PFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGN
PTPLINPLAGRAPYVGMVTKPASEQSQDFSIHNEDFPALPGSSYKDPTSSSDDNKSNLST
SGKTSSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFI
RAAETDPGMVHLALGSDLTTLGLNLNSTENLYPKFASPWASSPCRPQDIDFHVPSEYLTN
IHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPG
MEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPSTFNYNPAQQAF
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcttcaaggaagaagtttgtagagggggttgatggtgactaccatgatgag
aacatgtactacagccaatcatcgatgttcccacatcggtcagaaaaagatgcgatgttg
cagaagtggatcttagaatgggacttcaagagaaggaagatgctggcatcaccatcaaca
tcaggtcagctgtctcagtttggggcaagtttatacgggcaacaaagtgcactaggcctt
ccaatgaggggaatgagcaacaatacccctcagttaaatcgcagcttatcacaaggcact
cagttaccgagccacgtaacgccaacaacaggggtaccaacaatgtcacttcacacgcct
ccatctccgagcagggggatattgcctatgaatcctaggaatatgatgaaccactcccag
gttggtcagggcattggaattcccagcaggacaaacagcatgagcagttcagggttaggc
agccccaacagaagctctccaagcatcatatgtatgccaaagcagcaaccctctcgacaa
ccttttactgtgaacagtatgtctggatttggaatgaacagaaatcaggcatttggaatg
aataactccttatcaagtaacatttttaacggaacagatggaagtgaaaatgtgacagga
ctggacctctcagattttccagcactagcagacagaaacagaagggaaggaagtggcaat
ccaactccattaataaaccctttagctggaagggcaccgtatgttggaatggtaacaaaa
ccagcaagtgagcagtcccaggatttttcaatacacaatgaagattttccagcattacca
ggctccagctacaaagacccaacatcgagtagtgatgacaataaatctaatttgagtaca
tcaggcaaaacatcatccagcacagatgggcccaagtttcctggagacaaaagttcaact
acgcaaaacaacaaccagcagaaaaaagggatccaggtgttacctgatggtcgggttacc
aacattcctcaagggatggtgacggaccagtttggaatgattggcttgttaacattcatc
agggcagcagagacagatccaggaatggtacatcttgcattaggaagtgatttaacaaca
ctaggtctcaatctcaactcgactgaaaatctttatcccaaatttgcatcaccctgggca
tcatcaccttgtcgacctcaagacatagacttccatgttccatctgaatacttaactaac
attcacattagggataagctggctgcaataaaacttggccgatatggagaagatctcctg
ttttatctctattacatgaatggaggagatgtattacagctattagcagcagtagagcta
tttaaccgggattggagataccacaaagaagaacgagtatggatcaccagggcacccggc
atggagccaacaatgaaaaccaatacgtacgagaggggaacatattacttctttgactgt
cttaactggaggaaagtagctaaggagttccatctggaatatgacaaattagaagaaagg
cctcatctgccatcaaccttcaactacaaccctgctcagcaagccttctaa
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