Strigops habroptila (Kakapo): 115604838
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Entry
115604838 CDS
T08851
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04510
Focal adhesion
shab04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115604838 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115604838 (LAMB1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
OVT1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
115604838
NCBI-ProteinID:
XP_030334156
UniProt:
A0A672UIM8
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All DBs
Position
3:complement(15306541..15357274)
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AA seq
1786 aa
AA seq
DB search
MGRLPLYLCCCCLALWSAAAQEPEYSYGCAEGSCYPATGDLLIGRAARLSASSTCGLRQP
EPYCIVSHLQEDKKCFICDSEDPFHDTLNPDSHRIENVVTTFAPNRLKLWWQSENGLENV
TIQLNLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGITWQVYRYFAYDCESSFPGISTGP
MKKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFTKLH
TLGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMCR
HNTKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNGHSSQCHFDMAVYMTTGNTSGGV
CDDCQHNTIGRNCEQCKPFYFQHPERDLRDPDVCEPCDCDPAGSQNGGICDRYTDFSTGL
IAGQCRCKLFVEGERCDLCKEGFYGLSADDPAGCQSCACNPLGTHPGGNPCDSETGNCYC
KRLVTGKQCNNCLPEHWGLSNDMDGCRPCDCDQGGALNNNCSSQSGQCECRPHMFGRQCN
QVEPGYYFISLDHYIYEAEEASLGPGVNVIERQYTPDRTPSWTGIGFVRVPEGAYLEFYI
DNIPYSMEYDILIRYEPQLPDQWEKAVISVSRPGKIPTGSRCGNTVPDDDNQVVSLSPGS
RYVVLPRPVCFEKGLNYTIRLELSQYSSVDTETENPYTLIDSLVLMPYCKSLDIFTVGGS
GEDVVTNSAWETFQRYRCLENSRSVVKTPMTEVCKNIIFSISALLHETALSCQCDPQGSL
SSVCDPSGGQCQCRPNVVGRQCDRCAPGTFGFGPSGCRPCECHVRGSYNAFCDAETGQCH
CFPGVYGRQCDRCLPGFWGFPSCQPCHCNGHADDCNPYTGECLSCRDHTAGHNCERCQAG
YYGDPVLGSGDHCRPCLCPDGPESGRQFASGCYQDPVTLQVMCVCSVGYIGSRCDECASG
FFGSPDEVGGACQPCQCNNNIDTTDPEACDKKTGMCMKCLYHTEGENCHLCRQGYYGSAL
QQDCRKCVCNYLGTVREDCEGLESCRCEAATGQCRCLPNVVGQTCDRCAPHTWRLASGTG
CEQCDCDPARSLGPACNEFSGQCQCMPGFGGRTCRECQELFWGDPGVECRACDCNPRGIQ
TPQCDRATGQCICNEGVEGPRCDKCSRGYSGFFPDCVPCHQCFALWDVIISELSNRTQQF
LDRANALKITGVTGPYQQTLNTLEEKLSEIKTIIAQNPAAEPLKNIGNLFEEAEKLTADV
TVKIADVEENLSALAVKSNSTDTDLSALETDAKSLDRVVKELAEQLEFIKISDVRGALDS
ITKYFQMSLEAEERVNASTVHPNSAVELSARTRQEVEDLINEKEAQFKAKQEEQSRLLDE
LAGKLQSLDLSEVAEKTCGTPLGASCAESECGGLSCRTAEGKKKCGGPGCDGLVTVAHNA
WQKAMDFDRDILSALAEVEQLSRMVSEAKQRADEAKQNAQAVLLKTNATKEQVDRSNEDL
RNLIKQIRDFLMQDSADLDSIEAVANEVLNMEMPSTPQQLRALTEDIRERVESLSDVEVI
LQQSAGDIARAEMLLEEAKKASNGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDI
KGTQDLLTSIASENAASEETLNNATLRLFELERSVEDLKQKAVTNSKNVDNIEEKIVTAK
QNAEEVKQVLDTELNDKYKTVEDLIAKKTEESADARRKATMLQDEAKALLAQANSKLQLL
KDLEHTYENNQRVLEDKAKQLVELEETVRSLLQTISQKVAVYSTCL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtctcccgctgtacctctgctgctgctgcctcgcgctgtggtccgcggccgcg
caggagcccgagtacagctacggctgcgccgagggcagctgctaccccgccaccggcgac
ctgctcatcggccgcgccgcccgcctgtccgcctcctccacctgcggcctccgccagccc
gagccctactgcatcgtcagccacctccaggaggacaaaaaatgtttcatatgtgactcc
gaggatccttttcacgatactctcaatcctgacagtcatcgcattgaaaacgttgtcacc
acatttgcacccaatcggctgaagctctggtggcagtcagaaaatggtttggaaaacgtg
acaatccaactgaacctggaggctgaatttcatttcactcatctcattatgacctttaag
acgttccgtccagctgcaatgttgatagaaagatcatctgattttggaataacatggcaa
gtatataggtattttgcgtatgactgtgagagctcatttcctgggatttcaactggaccc
atgaagaaagtggatgatatcatttgtgattcccgatactccgacattgaaccttcaacg
gagggagaggtaatatatcgtgttttagatcctgcttttcgaattgaagatccatacagt
ccaaggattcaaaatctattaaagatcacaaatctgagagtcaaattcaccaagctgcac
acgctgggagataatctcctggactctaggatggagatcagagagaagtactactacgcc
atctacgacatggtggttcgcgggaactgcttctgctatggacatgccagcgagtgtgcg
ccagtggatggctttaatgaagaagtggaaggaatggtccatgggcactgcatgtgcagg
cacaataccaaagggttaaactgtgaacagtgtttggatttctaccatgacttaccctgg
cgacccgctgaaggccgcaatagcaacgcatgcaaaaagtgcaactgcaatggccactcc
agccagtgccactttgacatggctgtgtacatgacaacgggcaataccagcgggggagtg
tgtgatgactgccagcacaacaccataggacgcaactgcgagcagtgcaagcccttctac
tttcagcacccagagagagatctgagggaccccgatgtctgtgagccttgcgactgtgac
ccagctggctcccagaatggtggcatctgcgatcgctacactgatttctccaccggcctt
atcgccggacaatgccgctgtaaattatttgtggaaggggagcgttgtgacctctgcaaa
gaaggtttctatggcctgagtgctgatgacccagcgggttgtcagtcttgtgcatgtaat
cctctgggtacccaccccggggggaatccttgtgattcggagacaggaaactgctattgt
aagcgcctggtgacaggaaagcagtgcaacaactgcctgcctgagcactggggcctgagc
aatgacatggatggatgtcggccgtgcgactgcgaccagggaggagcgctgaacaacaac
tgctcaagtcaatctggccaatgtgaatgccggccccacatgtttggacgtcagtgcaac
caggtggagcccggttattacttcatttcactcgatcattacatctacgaggcagaggaa
gccagcttgggtcccggagtaaacgtaatagagcgccagtacacaccggaccgcacaccc
tcgtggacaggcataggatttgtaagagtccctgagggggcatacctggaattctatatc
gacaacatcccctactccatggagtacgatattctgatccgctacgagccgcagttgcca
gatcagtgggaaaaagctgtgatcagcgtctcgcgcccgggcaagattcccacgggtagc
cgctgtggcaataccgttcctgacgatgacaatcaggtcgtctcactgtcacccggctcc
agatacgttgttcttccacggcctgtctgctttgagaaggggctgaattacaccatccgc
ctggaactgtcccagtactcctcagtggatacagagacagagaacccatatacactgatt
gactctcttgttctcatgccatactgcaaatcactggacatattcacagtgggaggctca
ggtgaagatgtggtcacgaacagcgcttgggaaactttccaaagataccggtgtttggaa
aacagcaggagtgttgtgaaaacacccatgacagaagtctgcaagaacatcatattcagc
atttctgcactattacatgaaaccgcattatcatgccagtgtgacccccagggctccctg
agttctgtgtgtgaccccagcggaggacagtgccagtgtcgtcccaacgttgttggaaga
cagtgtgacagatgtgccccgggcaccttcgggttcgggccgagtggatgccgaccatgc
gagtgccatgtccgaggctcttacaatgccttctgcgacgcggagacgggccagtgtcac
tgcttccctggggtgtacgggcggcagtgcgaccgctgcctgccaggcttctggggcttc
cccagctgccagccctgccactgcaacgggcacgctgatgactgtaacccctacaccgga
gagtgcctgagctgccgggaccacacggcgggacacaactgtgagaggtgccaggctggc
tactatggagaccctgtcctgggatcaggcgaccactgccgtccctgcctttgtcctgat
ggccctgagagcggacgccagtttgccagcggctgttaccaggatccagtcacgctgcaa
gtcatgtgtgtttgtagcgtgggatacataggcagtcgatgtgatgaatgtgcgtctggc
ttctttgggagccccgacgaggttggcggcgcctgccagccgtgccagtgcaacaacaac
atcgacaccactgacccggaggcctgtgacaagaagacgggaatgtgcatgaagtgcctg
tatcacacggagggcgaaaactgccacctctgcagacagggctattacgggagcgccctg
cagcaggactgcagaaagtgcgtctgcaactacctgggcactgtgcgggaggactgcgag
ggcttggagagctgccggtgcgaggcggccacggggcagtgccgctgcctccccaacgtg
gtggggcagacctgtgaccgctgtgccccgcacacatggaggctggccagcggcaccggg
tgcgagcagtgcgactgcgaccccgcgcgctccctcggacctgcctgcaacgagttctcg
gggcagtgccagtgcatgccgggcttcggaggccggacctgccgggagtgccaggagctc
ttctggggcgacccaggcgtggagtgccgagcgtgtgattgcaaccctcgtggcatccaa
actccgcagtgcgaccgtgccaccgggcagtgcatctgcaatgaaggggtggaagggcca
cgctgtgacaagtgctcccggggctactcaggcttcttccctgactgtgtgccgtgccac
cagtgctttgccctctgggacgtgatcatcagcgagctgtctaataggacccagcagttc
ctggacagggctaatgccctcaaaatcactggagtcactggcccataccagcagacgctc
aacaccctggaggagaagctcagtgaaattaaaaccatcattgctcaaaatccagctgcc
gagcccctgaaaaacattgggaatctctttgaggaagcagaaaagctgacagcagatgtt
acagttaagatcgctgatgtagaagaaaacctgtcagccttagcagtgaagagcaacagc
acagacactgacctgagtgcactggaaacagatgccaaaagcctagaccgtgttgtgaaa
gaacttgcagaacagctagagttcatcaagatttctgatgttcggggagccttggacagt
atcaccaagtatttccagatgtccctggaggcagaggagagggtcaatgcttccactgtt
caccccaatagcgccgtggagctgtcagcgcggacgcggcaggaagtggaagacttaatc
aatgagaaggaggcccagttcaaggctaaacaagaggagcagtcgcgcctgctggatgag
ctcgcaggcaagctgcagagcctggatctctctgaagtggctgagaagacatgtggcact
cccctgggagcctcttgtgccgaatcagagtgtggtggtttaagctgtcggacagctgaa
ggcaagaagaagtgcggaggacccggctgtgacgggctggtgactgtagctcacaacgcc
tggcagaaagccatggacttcgacagagacatcctcagcgcattagcagaagttgagcaa
ctctccagaatggtctctgaggcgaaacagagagctgatgaagcaaaacagaacgcacaa
gcggttttgctcaaaaccaatgctacaaaagaacaagtggacagaagcaatgaagatctg
agaaatcttattaaacagattagagacttccttatgcaagacagcgctgacctggatagc
atcgaggcagtggctaatgaagtgctgaacatggagatgccaagcacaccccagcagctg
cgagccctcacagaagatattcgtgagcgtgtagaaagcctttctgatgttgaggtcatt
ctgcagcagagtgctggagacattgccagagcagaaatgctgctggaggaagctaaaaaa
gcgagcaatggtgcaacagatgttaaagtcactgcagacatggtgaaagcagcactggaa
gaagctgaaaaagctcaaaatgcagctgaaaaagccatcaaacaagctgacgaagatatt
aaaggaactcaagacctgctgacctcgattgcatctgaaaatgcagcatctgaagaaaca
ctgaacaatgctaccttacgtctgtttgagctggagaggagtgttgaagaccttaagcaa
aaggctgttacaaattcaaagaatgtggacaatatagaagaaaaaatagttactgcaaaa
caaaatgctgaagaagttaaacaggtcctcgacacggagctgaacgacaagtacaaaacg
gtggaagatctcattgccaagaagacagaagagtcggctgatgctaggaggaaggccacc
atgttgcaagatgaagctaaagccttgttggctcaagcaaacagcaagctccagctgctc
aaagacttggaacatacatatgaaaacaaccaaagagttctggaagacaaagccaagcag
ttggtggagctggaggagacagtccgctccctcttacagaccatcagccagaaggttgct
gtttacagcacctgcttgtaa
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integrated database retrieval system